Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16b07
(721 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ529300-1|ABF71986.1| 376|Homo sapiens TTG2 protein. 97 7e-20
BC093029-1|AAH93029.1| 292|Homo sapiens TRABD protein protein. 97 7e-20
BC012445-1|AAH12445.1| 330|Homo sapiens TRABD protein protein. 97 7e-20
AL449244-1|CAC15001.1| 376|Homo sapiens hypothetical protein pr... 97 7e-20
AL022328-7|CAB63044.1| 304|Homo sapiens protein ( Human DNA seq... 97 7e-20
AL022328-6|CAB63043.1| 309|Homo sapiens protein ( Human DNA seq... 97 7e-20
AL022328-5|CAI42754.1| 376|Homo sapiens protein ( Human DNA seq... 97 7e-20
>DQ529300-1|ABF71986.1| 376|Homo sapiens TTG2 protein.
Length = 376
Score = 96.7 bits (230), Expect = 7e-20
Identities = 45/103 (43%), Positives = 65/103 (63%)
Frame = +1
Query: 379 ELCRQRVSXXXXXXXXXXXXAKNFDSKKLKQAVKGQNLVTGMLHAMLLKTYADIAKELGV 558
ELC+ RVS A+ +KL+QAV+ L++G++ +LLK A I ++LG+
Sbjct: 106 ELCQYRVSMLKMDESTLLREAQELSLEKLQQAVRQNGLMSGLMQMLLLKVSAHITEQLGM 165
Query: 559 APGGEFRRAYHEMQKIPGCKLYLGDRPIQITIARAFQSLSVYE 687
APGGEFR A+ E K+P CK +LGDRPI +T RA +LS ++
Sbjct: 166 APGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQ 208
>BC093029-1|AAH93029.1| 292|Homo sapiens TRABD protein protein.
Length = 292
Score = 96.7 bits (230), Expect = 7e-20
Identities = 45/103 (43%), Positives = 65/103 (63%)
Frame = +1
Query: 379 ELCRQRVSXXXXXXXXXXXXAKNFDSKKLKQAVKGQNLVTGMLHAMLLKTYADIAKELGV 558
ELC+ RVS A+ +KL+QAV+ L++G++ +LLK A I ++LG+
Sbjct: 106 ELCQYRVSMLKMDESTLLREAQELSLEKLQQAVRQNGLMSGLMQMLLLKVSAHITEQLGM 165
Query: 559 APGGEFRRAYHEMQKIPGCKLYLGDRPIQITIARAFQSLSVYE 687
APGGEFR A+ E K+P CK +LGDRPI +T RA +LS ++
Sbjct: 166 APGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQ 208
>BC012445-1|AAH12445.1| 330|Homo sapiens TRABD protein protein.
Length = 330
Score = 96.7 bits (230), Expect = 7e-20
Identities = 45/103 (43%), Positives = 65/103 (63%)
Frame = +1
Query: 379 ELCRQRVSXXXXXXXXXXXXAKNFDSKKLKQAVKGQNLVTGMLHAMLLKTYADIAKELGV 558
ELC+ RVS A+ +KL+QAV+ L++G++ +LLK A I ++LG+
Sbjct: 60 ELCQYRVSMLKMDESTLLREAQELSLEKLQQAVRQNGLMSGLMQMLLLKVSAHITEQLGM 119
Query: 559 APGGEFRRAYHEMQKIPGCKLYLGDRPIQITIARAFQSLSVYE 687
APGGEFR A+ E K+P CK +LGDRPI +T RA +LS ++
Sbjct: 120 APGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQ 162
>AL449244-1|CAC15001.1| 376|Homo sapiens hypothetical protein
protein.
Length = 376
Score = 96.7 bits (230), Expect = 7e-20
Identities = 45/103 (43%), Positives = 65/103 (63%)
Frame = +1
Query: 379 ELCRQRVSXXXXXXXXXXXXAKNFDSKKLKQAVKGQNLVTGMLHAMLLKTYADIAKELGV 558
ELC+ RVS A+ +KL+QAV+ L++G++ +LLK A I ++LG+
Sbjct: 106 ELCQYRVSMLKMDESTLLREAQELSLEKLQQAVRQNGLMSGLMQMLLLKVSAHITEQLGM 165
Query: 559 APGGEFRRAYHEMQKIPGCKLYLGDRPIQITIARAFQSLSVYE 687
APGGEFR A+ E K+P CK +LGDRPI +T RA +LS ++
Sbjct: 166 APGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQ 208
>AL022328-7|CAB63044.1| 304|Homo sapiens protein ( Human DNA
sequence from clone RP3-402G11 on chromosome
22q13.31-13.33. ).
Length = 304
Score = 96.7 bits (230), Expect = 7e-20
Identities = 45/103 (43%), Positives = 65/103 (63%)
Frame = +1
Query: 379 ELCRQRVSXXXXXXXXXXXXAKNFDSKKLKQAVKGQNLVTGMLHAMLLKTYADIAKELGV 558
ELC+ RVS A+ +KL+QAV+ L++G++ +LLK A I ++LG+
Sbjct: 34 ELCQYRVSMLKMDESTLLREAQELSLEKLQQAVRQNGLMSGLMQMLLLKVSAHITEQLGM 93
Query: 559 APGGEFRRAYHEMQKIPGCKLYLGDRPIQITIARAFQSLSVYE 687
APGGEFR A+ E K+P CK +LGDRPI +T RA +LS ++
Sbjct: 94 APGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQ 136
>AL022328-6|CAB63043.1| 309|Homo sapiens protein ( Human DNA
sequence from clone RP3-402G11 on chromosome
22q13.31-13.33. ).
Length = 309
Score = 96.7 bits (230), Expect = 7e-20
Identities = 45/103 (43%), Positives = 65/103 (63%)
Frame = +1
Query: 379 ELCRQRVSXXXXXXXXXXXXAKNFDSKKLKQAVKGQNLVTGMLHAMLLKTYADIAKELGV 558
ELC+ RVS A+ +KL+QAV+ L++G++ +LLK A I ++LG+
Sbjct: 39 ELCQYRVSMLKMDESTLLREAQELSLEKLQQAVRQNGLMSGLMQMLLLKVSAHITEQLGM 98
Query: 559 APGGEFRRAYHEMQKIPGCKLYLGDRPIQITIARAFQSLSVYE 687
APGGEFR A+ E K+P CK +LGDRPI +T RA +LS ++
Sbjct: 99 APGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQ 141
>AL022328-5|CAI42754.1| 376|Homo sapiens protein ( Human DNA
sequence from clone RP3-402G11 on chromosome
22q13.31-13.33. ).
Length = 376
Score = 96.7 bits (230), Expect = 7e-20
Identities = 45/103 (43%), Positives = 65/103 (63%)
Frame = +1
Query: 379 ELCRQRVSXXXXXXXXXXXXAKNFDSKKLKQAVKGQNLVTGMLHAMLLKTYADIAKELGV 558
ELC+ RVS A+ +KL+QAV+ L++G++ +LLK A I ++LG+
Sbjct: 106 ELCQYRVSMLKMDESTLLREAQELSLEKLQQAVRQNGLMSGLMQMLLLKVSAHITEQLGM 165
Query: 559 APGGEFRRAYHEMQKIPGCKLYLGDRPIQITIARAFQSLSVYE 687
APGGEFR A+ E K+P CK +LGDRPI +T RA +LS ++
Sbjct: 166 APGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQ 208
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,512,521
Number of Sequences: 237096
Number of extensions: 2134441
Number of successful extensions: 3648
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3648
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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