Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16b06
(687 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC005102-1|AAH05102.1| 190|Homo sapiens chromosome 1 open readi... 103 5e-22
AL122003-5|CAI22244.1| 190|Homo sapiens chromosome 1 open readi... 103 5e-22
AF416713-1|AAL16807.1| 190|Homo sapiens unknown protein. 103 5e-22
AL122003-4|CAI22243.1| 228|Homo sapiens chromosome 1 open readi... 89 1e-17
BC033617-1|AAH33617.1| 519|Homo sapiens t-complex 11 (mouse)-li... 31 3.8
AY043013-1|AAL05591.1| 1877|Homo sapiens neuron navigator 1 prot... 30 8.9
AL645504-5|CAI17014.1| 1877|Homo sapiens neuron navigator 1 prot... 30 8.9
AL645504-1|CAI17010.1| 1830|Homo sapiens neuron navigator 1 prot... 30 8.9
AL512788-1|CAH71925.1| 1830|Homo sapiens neuron navigator 1 prot... 30 8.9
AJ488101-1|CAD32470.1| 1836|Homo sapiens steerin1 protein protein. 30 8.9
AJ251973-1|CAB66088.1| 409|Homo sapiens Steerin-1 protein protein. 30 8.9
AB032977-1|BAA86465.3| 1770|Homo sapiens KIAA1151 protein protein. 30 8.9
>BC005102-1|AAH05102.1| 190|Homo sapiens chromosome 1 open reading
frame 57 protein.
Length = 190
Score = 103 bits (248), Expect = 5e-22
Identities = 70/165 (42%), Positives = 97/165 (58%), Gaps = 8/165 (4%)
Frame = +2
Query: 116 EAEGVKVNGFITEEVRNKGVREGFDVVTSAGVRGRLARDQDLITIPIKR--KIGKYGVFI 289
++ GV V+GF TEEVR G R GFDVVT +G RG L+R L P KR ++G+Y V +
Sbjct: 27 KSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPLSR-VGLEPPPGKRECRVGQYVVDL 85
Query: 290 EEFENIALPCLN--ETTSQP--NLLVIDEIGSMELSSKKFKNVIENIFSSEQNSYNVVLA 457
FE +ALP L + +S P + VIDEIG MEL S+ F + S+ ++L
Sbjct: 86 TSFEQLALPVLRNADCSSGPGQRVCVIDEIGKMELFSQLFIQAVRQTLSTPG---TIILG 142
Query: 458 TIPVKNRS--ALVENIRSHPKAKVWVITKKNRNKLHEEVINEMKS 586
TIPV ALVE IR+ KV+ +TK+NRN L +++ ++S
Sbjct: 143 TIPVPKGKPLALVEEIRNRKDVKVFNVTKENRNHLLPDIVTCVQS 187
>AL122003-5|CAI22244.1| 190|Homo sapiens chromosome 1 open reading
frame 57 protein.
Length = 190
Score = 103 bits (248), Expect = 5e-22
Identities = 70/165 (42%), Positives = 97/165 (58%), Gaps = 8/165 (4%)
Frame = +2
Query: 116 EAEGVKVNGFITEEVRNKGVREGFDVVTSAGVRGRLARDQDLITIPIKR--KIGKYGVFI 289
++ GV V+GF TEEVR G R GFDVVT +G RG L+R L P KR ++G+Y V +
Sbjct: 27 KSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPLSR-VGLEPPPGKRECRVGQYVVDL 85
Query: 290 EEFENIALPCLN--ETTSQP--NLLVIDEIGSMELSSKKFKNVIENIFSSEQNSYNVVLA 457
FE +ALP L + +S P + VIDEIG MEL S+ F + S+ ++L
Sbjct: 86 TSFEQLALPVLRNADCSSGPGQRVCVIDEIGKMELFSQLFIQAVRQTLSTPG---TIILG 142
Query: 458 TIPVKNRS--ALVENIRSHPKAKVWVITKKNRNKLHEEVINEMKS 586
TIPV ALVE IR+ KV+ +TK+NRN L +++ ++S
Sbjct: 143 TIPVPKGKPLALVEEIRNRKDVKVFNVTKENRNHLLPDIVTCVQS 187
>AF416713-1|AAL16807.1| 190|Homo sapiens unknown protein.
Length = 190
Score = 103 bits (248), Expect = 5e-22
Identities = 70/165 (42%), Positives = 97/165 (58%), Gaps = 8/165 (4%)
Frame = +2
Query: 116 EAEGVKVNGFITEEVRNKGVREGFDVVTSAGVRGRLARDQDLITIPIKR--KIGKYGVFI 289
++ GV V+GF TEEVR G R GFDVVT +G RG L+R L P KR ++G+Y V +
Sbjct: 27 KSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPLSR-VGLEPPPGKRECRVGQYVVDL 85
Query: 290 EEFENIALPCLN--ETTSQP--NLLVIDEIGSMELSSKKFKNVIENIFSSEQNSYNVVLA 457
FE +ALP L + +S P + VIDEIG MEL S+ F + S+ ++L
Sbjct: 86 TSFEQLALPVLRNADCSSGPGQRVCVIDEIGKMELFSQLFIQAVRQTLSTPG---TIILG 142
Query: 458 TIPVKNRS--ALVENIRSHPKAKVWVITKKNRNKLHEEVINEMKS 586
TIPV ALVE IR+ KV+ +TK+NRN L +++ ++S
Sbjct: 143 TIPVPKGKPLALVEEIRNRKDVKVFNVTKENRNHLLPDIVTCVQS 187
>AL122003-4|CAI22243.1| 228|Homo sapiens chromosome 1 open reading
frame 57 protein.
Length = 228
Score = 89.0 bits (211), Expect = 1e-17
Identities = 63/145 (43%), Positives = 83/145 (57%), Gaps = 8/145 (5%)
Frame = +2
Query: 116 EAEGVKVNGFITEEVRNKGVREGFDVVTSAGVRGRLARDQDLITIPIKR--KIGKYGVFI 289
++ GV V+GF TEEVR G R GFDVVT +G RG L+R L P KR ++G+Y V +
Sbjct: 27 KSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPLSR-VGLEPPPGKRECRVGQYVVDL 85
Query: 290 EEFENIALPCLN--ETTSQP--NLLVIDEIGSMELSSKKFKNVIENIFSSEQNSYNVVLA 457
FE +ALP L + +S P + VIDEIG MEL S+ F + S+ ++L
Sbjct: 86 TSFEQLALPVLRNADCSSGPGQRVCVIDEIGKMELFSQLFIQAVRQTLSTPG---TIILG 142
Query: 458 TIPVKNRS--ALVENIRSHPKAKVW 526
TIPV ALVE IR+ KV+
Sbjct: 143 TIPVPKGKPLALVEEIRNRKDVKVF 167
>BC033617-1|AAH33617.1| 519|Homo sapiens t-complex 11 (mouse)-like
2 protein.
Length = 519
Score = 31.1 bits (67), Expect = 3.8
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -1
Query: 234 WSLAKRPLTPALVTTSKPSLTP-LFLTSSVIKPL 136
+SL++ LTP TSKPSL+P L L +S +K L
Sbjct: 276 FSLSESALTPGAENTSKPSLSPTLVLNNSYLKLL 309
>AY043013-1|AAL05591.1| 1877|Homo sapiens neuron navigator 1
protein.
Length = 1877
Score = 29.9 bits (64), Expect = 8.9
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -1
Query: 225 AKRPLTPALVTTSKPSLTPLFLTSSVIKPLTFTPSASKSED 103
AK PL P KPS P + V KPL+ P A+ SED
Sbjct: 157 AKTPLAPLAPNLGKPSRIPRGPYAEV-KPLSKAPEAAVSED 196
>AL645504-5|CAI17014.1| 1877|Homo sapiens neuron navigator 1
protein.
Length = 1877
Score = 29.9 bits (64), Expect = 8.9
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -1
Query: 225 AKRPLTPALVTTSKPSLTPLFLTSSVIKPLTFTPSASKSED 103
AK PL P KPS P + V KPL+ P A+ SED
Sbjct: 157 AKTPLAPLAPNLGKPSRIPRGPYAEV-KPLSKAPEAAVSED 196
>AL645504-1|CAI17010.1| 1830|Homo sapiens neuron navigator 1
protein.
Length = 1830
Score = 29.9 bits (64), Expect = 8.9
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -1
Query: 225 AKRPLTPALVTTSKPSLTPLFLTSSVIKPLTFTPSASKSED 103
AK PL P KPS P + V KPL+ P A+ SED
Sbjct: 170 AKTPLAPLAPNLGKPSRIPRGPYAEV-KPLSKAPEAAVSED 209
>AL512788-1|CAH71925.1| 1830|Homo sapiens neuron navigator 1
protein.
Length = 1830
Score = 29.9 bits (64), Expect = 8.9
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -1
Query: 225 AKRPLTPALVTTSKPSLTPLFLTSSVIKPLTFTPSASKSED 103
AK PL P KPS P + V KPL+ P A+ SED
Sbjct: 170 AKTPLAPLAPNLGKPSRIPRGPYAEV-KPLSKAPEAAVSED 209
>AJ488101-1|CAD32470.1| 1836|Homo sapiens steerin1 protein protein.
Length = 1836
Score = 29.9 bits (64), Expect = 8.9
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -1
Query: 225 AKRPLTPALVTTSKPSLTPLFLTSSVIKPLTFTPSASKSED 103
AK PL P KPS P + V KPL+ P A+ SED
Sbjct: 116 AKTPLAPLAPNLGKPSRIPRGPYAEV-KPLSKAPEAAVSED 155
>AJ251973-1|CAB66088.1| 409|Homo sapiens Steerin-1 protein protein.
Length = 409
Score = 29.9 bits (64), Expect = 8.9
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -1
Query: 225 AKRPLTPALVTTSKPSLTPLFLTSSVIKPLTFTPSASKSED 103
AK PL P KPS P + V KPL+ P A+ SED
Sbjct: 157 AKTPLAPLAPNLGKPSRIPRGPYAEV-KPLSKAPEAAVSED 196
>AB032977-1|BAA86465.3| 1770|Homo sapiens KIAA1151 protein protein.
Length = 1770
Score = 29.9 bits (64), Expect = 8.9
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -1
Query: 225 AKRPLTPALVTTSKPSLTPLFLTSSVIKPLTFTPSASKSED 103
AK PL P KPS P + V KPL+ P A+ SED
Sbjct: 50 AKTPLAPLAPNLGKPSRIPRGPYAEV-KPLSKAPEAAVSED 89
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,799,319
Number of Sequences: 237096
Number of extensions: 1514003
Number of successful extensions: 7624
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7613
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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