Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16b04
         (692 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23172-13|ABH03527.1|  282|Caenorhabditis elegans Hypothetical p...    29   4.2  
U23172-12|ABH03526.1|  562|Caenorhabditis elegans Hypothetical p...    29   4.2  
U80024-3|AAK18893.1|  342|Caenorhabditis elegans Seven tm recept...    28   7.3  
U28993-3|AAT81196.1|  635|Caenorhabditis elegans Hypothetical pr...    27   9.6  
U28993-2|AAK31497.1|  720|Caenorhabditis elegans Hypothetical pr...    27   9.6  
AF039045-9|AAB94200.1|  315|Caenorhabditis elegans Hypothetical ...    27   9.6  

>U23172-13|ABH03527.1|  282|Caenorhabditis elegans Hypothetical
           protein F25B5.7c protein.
          Length = 282

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -2

Query: 559 REGEQRRLDVVHEVHAAPRQL--GLRGAPPPGRQRHAHPRAVPHLAH 425
           RE  QRR   +  + AA R+   GL G PPPG      P+A P   H
Sbjct: 74  REDLQRRQQELERLEAARRERMRGL-GGPPPGMPGGVPPQAQPFNPH 119


>U23172-12|ABH03526.1|  562|Caenorhabditis elegans Hypothetical
           protein F25B5.7a protein.
          Length = 562

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -2

Query: 559 REGEQRRLDVVHEVHAAPRQL--GLRGAPPPGRQRHAHPRAVPHLAH 425
           RE  QRR   +  + AA R+   GL G PPPG      P+A P   H
Sbjct: 354 REDLQRRQQELERLEAARRERMRGL-GGPPPGMPGGVPPQAQPFNPH 399


>U80024-3|AAK18893.1|  342|Caenorhabditis elegans Seven tm receptor
           protein 190 protein.
          Length = 342

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 440 YGAWMGVSLAAWWRSAPQAE 499
           YG W G  +  WWR+ P  +
Sbjct: 135 YGVWWGTLVNIWWRANPDMD 154


>U28993-3|AAT81196.1|  635|Caenorhabditis elegans Hypothetical
           protein F22D3.2b protein.
          Length = 635

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -2

Query: 523 EVHAAPRQLGLRGAPPPGRQRHAHPRAV-PHLAHPEARHARRV 398
           EV AA ++  ++  PPP   R   PR + P++ H E  H  R+
Sbjct: 143 EVSAASKKNPVQPPPPP-LSRSTTPRKIHPYVIHEEPLHGTRI 184


>U28993-2|AAK31497.1|  720|Caenorhabditis elegans Hypothetical
           protein F22D3.2a protein.
          Length = 720

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -2

Query: 523 EVHAAPRQLGLRGAPPPGRQRHAHPRAV-PHLAHPEARHARRV 398
           EV AA ++  ++  PPP   R   PR + P++ H E  H  R+
Sbjct: 143 EVSAASKKNPVQPPPPP-LSRSTTPRKIHPYVIHEEPLHGTRI 184


>AF039045-9|AAB94200.1|  315|Caenorhabditis elegans Hypothetical
           protein F15E11.3 protein.
          Length = 315

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -1

Query: 158 QQCKSLWCNPSWQPSPERDGCESTCTSTRPSHGCTKL 48
           Q+  + +C+P   P P    C ST T+     GCT++
Sbjct: 142 QEIDAKYCSPP-SPVPHGKWCNSTVTTLLIKEGCTQI 177


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,516,113
Number of Sequences: 27780
Number of extensions: 209306
Number of successful extensions: 860
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)