Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16b02
         (676 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VV43 Cluster: TPPP family protein CG4893; n=8; Endopt...    70   6e-11
UniRef50_Q5TR29 Cluster: ENSANGP00000025926; n=1; Anopheles gamb...    40   0.073
UniRef50_UPI0000DB72DA Cluster: PREDICTED: hypothetical protein;...    36   0.68 
UniRef50_A0KMP6 Cluster: Exonuclease SbcC; n=2; Aeromonas|Rep: E...    34   3.6  
UniRef50_Q4HH64 Cluster: Membrane protein, putative; n=1; Campyl...    33   4.8  
UniRef50_Q22551 Cluster: Groundhog (Hedgehog-like family) protei...    33   4.8  
UniRef50_Q4E554 Cluster: AAA ATPase, putative; n=2; Trypanosoma ...    33   8.4  

>UniRef50_Q9VV43 Cluster: TPPP family protein CG4893; n=8;
           Endopterygota|Rep: TPPP family protein CG4893 -
           Drosophila melanogaster (Fruit fly)
          Length = 192

 Score = 69.7 bits (163), Expect = 6e-11
 Identities = 34/38 (89%), Positives = 34/38 (89%)
 Frame = +3

Query: 561 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIH 674
           GD KSDGK ITLSQSDKWMKQAKVID KKITTTDT IH
Sbjct: 48  GDSKSDGKLITLSQSDKWMKQAKVID-KKITTTDTGIH 84


>UniRef50_Q5TR29 Cluster: ENSANGP00000025926; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000025926 - Anopheles gambiae
           str. PEST
          Length = 115

 Score = 39.5 bits (88), Expect = 0.073
 Identities = 18/34 (52%), Positives = 22/34 (64%)
 Frame = +3

Query: 570 KSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAI 671
           + DGK I LSQSD WM+QA +I  K  T T T +
Sbjct: 35  QGDGKRILLSQSDCWMQQANLIGPKHFTLTQTGL 68


>UniRef50_UPI0000DB72DA Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 91

 Score = 36.3 bits (80), Expect = 0.68
 Identities = 15/26 (57%), Positives = 20/26 (76%)
 Frame = +3

Query: 588 ITLSQSDKWMKQAKVIDGKKITTTDT 665
           I LSQSDKW+  A+++D   +TTTDT
Sbjct: 40  IPLSQSDKWLISARILDMVTLTTTDT 65


>UniRef50_A0KMP6 Cluster: Exonuclease SbcC; n=2; Aeromonas|Rep:
           Exonuclease SbcC - Aeromonas hydrophila subsp.
           hydrophila (strain ATCC 7966 / NCIB 9240)
          Length = 1251

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
 Frame = +3

Query: 225 WSSFRRASIKQQGKATAG-SISAATKSASLKRLSATDSLA*YMISSHKYIKHL*RKMSTE 401
           W  FRRA I  QG+  A    SA  +SA L+R++ T+  +   I +H+  +   +K++  
Sbjct: 162 WEQFRRAVILPQGEFAAFLKSSADERSALLERMTGTELYSAISIQTHERAREEQQKLAAI 221

Query: 402 AQNTD--AAVEQVTQE 443
            Q     A +++ T+E
Sbjct: 222 GQRLGDVALMDEATRE 237


>UniRef50_Q4HH64 Cluster: Membrane protein, putative; n=1;
           Campylobacter coli RM2228|Rep: Membrane protein,
           putative - Campylobacter coli RM2228
          Length = 89

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = -1

Query: 118 FKFLTVFC*LLDFFYIMLGVIMYVKKKRLLILFIDYF 8
           F ++ +FC ++ F Y++LG I Y++ ++L     DYF
Sbjct: 43  FLYVLLFCEIILFLYMLLG-IFYIRNQKLFYKIFDYF 78


>UniRef50_Q22551 Cluster: Groundhog (Hedgehog-like family) protein
           6; n=2; Caenorhabditis|Rep: Groundhog (Hedgehog-like
           family) protein 6 - Caenorhabditis elegans
          Length = 559

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = +1

Query: 490 MERPVKARITPYLSRK-PSRRFPNLEIPSP 576
           +ERPV AR TPY+ R  P+R  P +E P P
Sbjct: 174 IERPVPARPTPYIERPVPARPAPYIERPEP 203



 Score = 32.7 bits (71), Expect = 8.4
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
 Frame = +1

Query: 490 MERPVKARITPYLSRKPSRRFPNLE----IPSPMEKPSRSR 600
           +ERPV AR  PY+   P+R  P +E     P P  +P R+R
Sbjct: 210 IERPVPARPAPYIEPTPARPAPYIEPSTAKPQPRPQPPRTR 250


>UniRef50_Q4E554 Cluster: AAA ATPase, putative; n=2; Trypanosoma
            cruzi|Rep: AAA ATPase, putative - Trypanosoma cruzi
          Length = 1214

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = -3

Query: 329  GSGQAFKRRTFRCCTNTACCRLALLLDTGAAK*APMFDNTREMRESYLFEDCKVIF 162
            G   A +   + C      C +A LL  GA K   +FD  R++    +F++ +V+F
Sbjct: 1017 GKSLAVEGIAYECAATIRLCNVAELLLVGALKVHEVFDEGRKLGAIIVFDEAQVLF 1072


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 626,338,668
Number of Sequences: 1657284
Number of extensions: 11797243
Number of successful extensions: 29890
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 28769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29875
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)