Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16b01
         (691 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98743-1|CAA67295.1|  610|Homo sapiens RNA helicase protein.           30   6.8  
CR457060-1|CAG33341.1|  610|Homo sapiens DDX18 protein.                30   6.8  
BC024739-1|AAH24739.1|  670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ...    30   6.8  
BC003360-1|AAH03360.1|  670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ...    30   6.8  
BC001238-1|AAH01238.1|  670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ...    30   6.8  
AK001467-1|BAA91709.1|  670|Homo sapiens protein ( Homo sapiens ...    30   6.8  
AF286472-1|AAG00551.1|  567|Homo sapiens retinitis pigmentosa GT...    30   6.8  
BC092513-1|AAH92513.1|  890|Homo sapiens WD repeat domain 81 pro...    30   8.9  
AL834379-1|CAD39042.1|  909|Homo sapiens hypothetical protein pr...    30   8.9  
AK091136-1|BAC03593.1|  890|Homo sapiens protein ( Homo sapiens ...    30   8.9  
AK074111-1|BAB84937.1|  938|Homo sapiens FLJ00182 protein protein.     30   8.9  

>X98743-1|CAA67295.1|  610|Homo sapiens RNA helicase protein.
          Length = 610

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +1

Query: 316 EAEVQEEMAR-DNQGTYQHEALETTRGTQENTSHRY*PARVDSEEMGASVPETPSSQA*A 492
           +AE   + A+ +N+G  + E+ ETT+ T+ N        + D++E  + VP  P     A
Sbjct: 60  DAEPDTKKAKTENKGKSEEESAETTKETENNVE------KPDNDEDESEVPSLPLGLTGA 113

Query: 493 AENTS 507
            E+TS
Sbjct: 114 FEDTS 118


>CR457060-1|CAG33341.1|  610|Homo sapiens DDX18 protein.
          Length = 610

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +1

Query: 316 EAEVQEEMAR-DNQGTYQHEALETTRGTQENTSHRY*PARVDSEEMGASVPETPSSQA*A 492
           +AE   + A+ +N+G  + E+ ETT+ T+ N        + D++E  + VP  P     A
Sbjct: 60  DAEPDTKKAKTENKGKSEEESAETTKETENNVE------KPDNDEDESEVPSLPLGLTGA 113

Query: 493 AENTS 507
            E+TS
Sbjct: 114 FEDTS 118


>BC024739-1|AAH24739.1|  670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 18 protein.
          Length = 670

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +1

Query: 316 EAEVQEEMAR-DNQGTYQHEALETTRGTQENTSHRY*PARVDSEEMGASVPETPSSQA*A 492
           +AE   + A+ +N+G  + E+ ETT+ T+ N        + D++E  + VP  P     A
Sbjct: 120 DAEPDTKKAKTENKGKSEEESAETTKETENNVE------KPDNDEDESEVPSLPLGLTGA 173

Query: 493 AENTS 507
            E+TS
Sbjct: 174 FEDTS 178


>BC003360-1|AAH03360.1|  670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 18 protein.
          Length = 670

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +1

Query: 316 EAEVQEEMAR-DNQGTYQHEALETTRGTQENTSHRY*PARVDSEEMGASVPETPSSQA*A 492
           +AE   + A+ +N+G  + E+ ETT+ T+ N        + D++E  + VP  P     A
Sbjct: 120 DAEPDTKKAKTENKGKSEEESAETTKETENNVE------KPDNDEDESEVPSLPLGLTGA 173

Query: 493 AENTS 507
            E+TS
Sbjct: 174 FEDTS 178


>BC001238-1|AAH01238.1|  670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 18 protein.
          Length = 670

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +1

Query: 316 EAEVQEEMAR-DNQGTYQHEALETTRGTQENTSHRY*PARVDSEEMGASVPETPSSQA*A 492
           +AE   + A+ +N+G  + E+ ETT+ T+ N        + D++E  + VP  P     A
Sbjct: 120 DAEPDTKKAKTENKGKSEEESAETTKETENNVE------KPDNDEDESEVPSLPLGLTGA 173

Query: 493 AENTS 507
            E+TS
Sbjct: 174 FEDTS 178


>AK001467-1|BAA91709.1|  670|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10605 fis, clone NT2RP2005126, highly similar to
           H.sapiens mRNA for RNA helicase. ).
          Length = 670

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +1

Query: 316 EAEVQEEMAR-DNQGTYQHEALETTRGTQENTSHRY*PARVDSEEMGASVPETPSSQA*A 492
           +AE   + A+ +N+G  + E+ ETT+ T+ N        + D++E  + VP  P     A
Sbjct: 120 DAEPDTKKAKTENKGKSEEESAETTKETENNVE------KPDNDEDESEVPSLPLGLTGA 173

Query: 493 AENTS 507
            E+TS
Sbjct: 174 FEDTS 178


>AF286472-1|AAG00551.1|  567|Homo sapiens retinitis pigmentosa
           GTPase regulator protein.
          Length = 567

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 32/148 (21%), Positives = 59/148 (39%), Gaps = 2/148 (1%)
 Frame = +1

Query: 157 KISGASRWRRSSTSRQKEGR*EKGKGRTARAGRNTE-DTIANR*RGSGIPCSDEEAEVQE 333
           +++    W++     Q++   E+G  +     RN E +       G G    +EE + +E
Sbjct: 110 ELAEKEEWKKRDGEEQEQKEREQGHQKE----RNQEMEEGGEEEHGEG---EEEEGDREE 162

Query: 334 EMARDNQGTYQHEALETTRGTQENTSHRY*PARVDSEEMGASVPETPSSQA*AAENTS*G 513
           E  ++ +G  + E  E     ++    R    R   EE G    E    Q    E  + G
Sbjct: 163 EEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKG----EEEGDQGEGEEEETEG 218

Query: 514 VDAASIRGGQVE-EDLAQFHASREEQDD 594
                  GG+VE  ++ +    REE+++
Sbjct: 219 RGEEKEEGGEVEGGEVEEGKGEREEEEE 246


>BC092513-1|AAH92513.1|  890|Homo sapiens WD repeat domain 81
           protein.
          Length = 890

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 454 ASVPETPSSQA*AAENTS*GVDAASIRGGQVEEDLAQFHASREEQDD 594
           +S  ET   +  A +     VD +S+R G   +DL Q   S EE+++
Sbjct: 61  SSTSETSLGEERAPDEGGAPVDKSSLRSGDSSQDLKQSEGSEEEEEE 107


>AL834379-1|CAD39042.1|  909|Homo sapiens hypothetical protein
           protein.
          Length = 909

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 454 ASVPETPSSQA*AAENTS*GVDAASIRGGQVEEDLAQFHASREEQDD 594
           +S  ET   +  A +     VD +S+R G   +DL Q   S EE+++
Sbjct: 80  SSTSETSLGEERAPDEGGAPVDKSSLRSGDSSQDLKQSEGSEEEEEE 126


>AK091136-1|BAC03593.1|  890|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33817 fis, clone CTONG2003028. ).
          Length = 890

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 454 ASVPETPSSQA*AAENTS*GVDAASIRGGQVEEDLAQFHASREEQDD 594
           +S  ET   +  A +     VD +S+R G   +DL Q   S EE+++
Sbjct: 61  SSTSETSLGEERAPDEGGAPVDKSSLRSGDSSQDLKQSEGSEEEEEE 107


>AK074111-1|BAB84937.1|  938|Homo sapiens FLJ00182 protein protein.
          Length = 938

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 454 ASVPETPSSQA*AAENTS*GVDAASIRGGQVEEDLAQFHASREEQDD 594
           +S  ET   +  A +     VD +S+R G   +DL Q   S EE+++
Sbjct: 239 SSTSETSLGEERAPDEGGAPVDKSSLRSGDSSQDLKQSEGSEEEEEE 285


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,782,445
Number of Sequences: 237096
Number of extensions: 1690798
Number of successful extensions: 8832
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8830
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)