Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16a23
         (431 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U67953-6|ABA00176.1|  287|Caenorhabditis elegans Hypothetical pr...    32   0.20 
AL117195-12|CAB60765.1|  425|Caenorhabditis elegans Hypothetical...    29   1.1  
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ...    29   1.1  
AF078788-4|AAC26961.1|  342|Caenorhabditis elegans Hypothetical ...    28   2.5  
U64845-4|AAC48029.1|  623|Caenorhabditis elegans Hypothetical pr...    28   3.3  
AC024817-39|AAP68916.1|  128|Caenorhabditis elegans Hypothetical...    27   4.4  
U23455-2|AAC46534.1|  423|Caenorhabditis elegans Hypothetical pr...    27   7.7  
AC024830-1|AAF59605.1|  256|Caenorhabditis elegans Hypothetical ...    27   7.7  

>U67953-6|ABA00176.1|  287|Caenorhabditis elegans Hypothetical
           protein ZC13.10 protein.
          Length = 287

 Score = 31.9 bits (69), Expect = 0.20
 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
 Frame = -1

Query: 413 NQFIATNFNTNVLHRNTDNL-QICCDH*QYPCLLRSESRRRSTQPRLKPSHTLKSRIKQH 237
           N    T  N+N ++RN+++  Q          +   ES+ R     L P H +  R    
Sbjct: 22  NYLSLTTNNSNYINRNSESSPQYTGTRNSSLSINYPESKERCNNDLLIPCHLMPPRDPYA 81

Query: 236 IPTSTEPYWRSIHCSPVEQSQALWSISLSVFRCC 135
              ST   W SI  S +  S+  +    S  +CC
Sbjct: 82  SRLSTSSAWSSIRLSVLSLSRVFFLKPCSKHKCC 115


>AL117195-12|CAB60765.1|  425|Caenorhabditis elegans Hypothetical
           protein Y57A10A.19 protein.
          Length = 425

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = -1

Query: 311 SESRRRSTQPRLKPSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQALWSISLS 150
           SE+ RRST    K S   +  +KQ  P+ +E Y    + +P+   ++   +  S
Sbjct: 341 SENERRSTATASKKSRMDELEVKQEPPSDSEDYIAKTNLAPIRVEKSAEKVEKS 394


>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
            protein Y53C10A.9 protein.
          Length = 1564

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 17/65 (26%), Positives = 31/65 (47%)
 Frame = +2

Query: 179  FVQQDYNEWNANTALWMLVYAVLFWILTYVMVLTVAVCFDVGFRSVTSMGIVNGHNRSVN 358
            F  Q Y    +  A W +V+   F + T+ ++ T      +GF  + S G++ GH   + 
Sbjct: 1020 FAHQQYLTGLSTIAYWGVVFLWDFLLFTFFLLYT------IGF--LISFGVLQGHIHEIV 1071

Query: 359  YLYYG 373
             ++YG
Sbjct: 1072 VIFYG 1076


>AF078788-4|AAC26961.1|  342|Caenorhabditis elegans Hypothetical
           protein ZC190.2 protein.
          Length = 342

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +2

Query: 248 FWILTYVMVLTVAVCFDVGFRSVTSMGIVNGHNRSVNYLYYGAKHLY*N 394
           F  +  V +   +  F +GF S+T M I+NG    V  L+Y AK +Y N
Sbjct: 152 FLYIYLVRISYDSTLFAIGFGSLTMMEILNG--CIVFSLFYTAKEIYQN 198


>U64845-4|AAC48029.1|  623|Caenorhabditis elegans Hypothetical
           protein F45F2.7 protein.
          Length = 623

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +2

Query: 161 CSIELGFVQQDYNEWNANTALWMLVY--AVLFWILTYVMVL 277
           C I +       + W A T   +L+Y  A+LF++ TY+M++
Sbjct: 79  CLISISSAWSSPDLWLAETIFSLLMYLIAILFFMYTYLMII 119


>AC024817-39|AAP68916.1|  128|Caenorhabditis elegans Hypothetical
           protein Y54G2A.36 protein.
          Length = 128

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 259 NVCDGFNRGCVLRRRLSLRNKHGYCQWSQQICK 357
           + C GFNR     +  S R+ H   QWS++ C+
Sbjct: 63  SACGGFNRCLHQEQSHSDRSPHFILQWSRRQCR 95


>U23455-2|AAC46534.1|  423|Caenorhabditis elegans Hypothetical
           protein F55E10.5 protein.
          Length = 423

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 21/87 (24%), Positives = 37/87 (42%)
 Frame = +2

Query: 44  FDLMK*NLTYLIYLATQNIAAMTSYTPEDMNNIETPKEKCSIELGFVQQDYNEWNANTAL 223
           FD++   LTY   +    +     YT + MN   T      + L   +    +       
Sbjct: 40  FDILSEFLTYKYVVNAITLNLTIKYTSQKMNETHT-DSIIDVTLAIEETSQKQHQ----- 93

Query: 224 WMLVYAVLFWILTYVMVLTVAVCFDVG 304
            M+  AVL++IL  ++V+ +  C D+G
Sbjct: 94  -MITVAVLWFILAILLVMVIFAC-DLG 118


>AC024830-1|AAF59605.1|  256|Caenorhabditis elegans Hypothetical
           protein Y55F3BR.5 protein.
          Length = 256

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 395 NFNTNVLHRNTDNLQICC 342
           NF+ N++H   D ++ICC
Sbjct: 79  NFDGNLVHATFDKIEICC 96


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,296,433
Number of Sequences: 27780
Number of extensions: 215797
Number of successful extensions: 730
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)