Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16a23
         (431 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   1.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   1.9  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   3.4  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -1

Query: 377  LHRNTDNLQICCDH*QYPCLLRSES 303
            L      L++C  H   PC+LR+ +
Sbjct: 1088 LEHGAAGLRLCLHHRDLPCVLRAST 1112


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 80  YLATQNIAAMTSYTPEDMNNIETPKEKCSIEL 175
           Y +  N    T Y PE  +N++   EK  I+L
Sbjct: 386 YYSKHNTQQFTQYIPESSSNLQ---EKTKIDL 414


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 329 IVNGHNRSVNYLYYGA 376
           ++ G  RSVN  YYG+
Sbjct: 381 LIEGTGRSVNPRYYGS 396


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,207
Number of Sequences: 438
Number of extensions: 2631
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)