Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16a19
         (459 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    28   0.042
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    28   0.042
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    28   0.042
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   3.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   3.7  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    22   3.7  
AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    21   4.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   6.4  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 28.3 bits (60), Expect = 0.042
 Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
 Frame = -3

Query: 253 SLTPRFNVLDTFRFILGSEILYSNLINLMMVRVVQPVFFMSFLIADKTISPVL---NVLF 83
           SLT  F VL T   +LG+ ++  ++     +R+VQ  F +S  +AD  ++ ++   NV +
Sbjct: 40  SLTLGFLVLAT---VLGNALVILSVFTYRPLRIVQNFFIVSLAVADLAVAILVMPFNVAY 96

Query: 82  IL 77
           +L
Sbjct: 97  LL 98


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 28.3 bits (60), Expect = 0.042
 Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
 Frame = -3

Query: 253 SLTPRFNVLDTFRFILGSEILYSNLINLMMVRVVQPVFFMSFLIADKTISPVL---NVLF 83
           SLT  F VL T   +LG+ ++  ++     +R+VQ  F +S  +AD  ++ ++   NV +
Sbjct: 40  SLTLGFLVLAT---VLGNALVILSVFTYRPLRIVQNFFIVSLAVADLAVAILVMPFNVAY 96

Query: 82  IL 77
           +L
Sbjct: 97  LL 98


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 28.3 bits (60), Expect = 0.042
 Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
 Frame = -3

Query: 253 SLTPRFNVLDTFRFILGSEILYSNLINLMMVRVVQPVFFMSFLIADKTISPVL---NVLF 83
           SLT  F VL T   +LG+ ++  ++     +R+VQ  F +S  +AD  ++ ++   NV +
Sbjct: 40  SLTLGFLVLAT---VLGNALVILSVFTYRPLRIVQNFFIVSLAVADLAVAILVMPFNVAY 96

Query: 82  IL 77
           +L
Sbjct: 97  LL 98


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 210 INRKVSRTLKRGVRLGLLQMER 275
           I+ ++SR L  G+R GL  +ER
Sbjct: 678 ISDRLSRDLYCGIRAGLSWLER 699


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 210 INRKVSRTLKRGVRLGLLQMER 275
           I+ ++SR L  G+R GL  +ER
Sbjct: 716 ISDRLSRDLYCGIRAGLSWLER 737


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 193 LYSNLINLMMVRVVQPVFFMSF 128
           LY N+IN+  + V  PV+  +F
Sbjct: 336 LYYNIINIEQIPVPVPVYCGNF 357


>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 193 LYSNLINLMMVRVVQPVFFMSF 128
           LY N+IN+  + V  P++  +F
Sbjct: 334 LYYNIINIEQIPVPVPIYCGNF 355


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -2

Query: 155 CPASVFHEFLDCRQND 108
           CP +++   LDC Q +
Sbjct: 863 CPEAIYQLMLDCWQKE 878


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,234
Number of Sequences: 438
Number of extensions: 2631
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)