Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16a18
         (127 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78067-9|CAB01528.2|  450|Caenorhabditis elegans Hypothetical pr...    25   5.6  
Z83105-9|CAB05489.1|  199|Caenorhabditis elegans Hypothetical pr...    25   7.4  
U40415-10|AAK39254.1|  215|Caenorhabditis elegans Dnaj domain (p...    25   9.8  

>Z78067-9|CAB01528.2|  450|Caenorhabditis elegans Hypothetical
           protein ZC412.1 protein.
          Length = 450

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 51  SYQFYRNAEVKTLILLNISLC 113
           SY  Y +  +KT+++ N++LC
Sbjct: 158 SYPLYYSQNLKTMVIENVTLC 178


>Z83105-9|CAB05489.1|  199|Caenorhabditis elegans Hypothetical
           protein F14H3.9 protein.
          Length = 199

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 47  PFIPILQKR*SENFDTFKY 103
           PFI  L K  S NF+ FKY
Sbjct: 116 PFIACLSKLRSSNFNIFKY 134


>U40415-10|AAK39254.1|  215|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 14 protein.
          Length = 215

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 58  WYEWFF*SFYVLSLERFCC 2
           W++W F +F +L+   FCC
Sbjct: 128 WFKWTFFAFGLLTGGFFCC 146


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,145,346
Number of Sequences: 27780
Number of extensions: 23185
Number of successful extensions: 55
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 12,740,198
effective HSP length: 22
effective length of database: 12,129,038
effective search space used: 230451722
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)