Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16a16
(691 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC30D10.18c |rpl102|rpl1-2, rpl10a-2|60S ribosomal protein L10... 166 3e-42
SPCC1183.08c |rpl101|rpl1-1, rpl10a-1|60S ribosomal protein L10a... 163 2e-41
SPAC8F11.04 |||U3 snoRNP-associated protein Cic1/Utp30 family |S... 46 5e-06
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 30 0.27
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo... 29 0.48
SPAC869.03c |||urea transporter |Schizosaccharomyces pombe|chr 1... 28 1.1
SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyce... 27 2.6
SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces p... 27 2.6
SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|ch... 27 3.4
SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces pomb... 26 4.5
SPAC18B11.05 |gpi18||pig-V|Schizosaccharomyces pombe|chr 1|||Manual 26 5.9
SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces... 26 5.9
SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2 |Schizosacch... 26 5.9
SPAC23H3.14 |||LAlv9 family protein|Schizosaccharomyces pombe|ch... 25 7.8
SPCC1739.04c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 25 7.8
SPBC19C7.11 |||ClC chloride channel |Schizosaccharomyces pombe|c... 25 7.8
SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 25 7.8
>SPBC30D10.18c |rpl102|rpl1-2, rpl10a-2|60S ribosomal protein
L10a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 216
Score = 166 bits (403), Expect = 3e-42
Identities = 80/119 (67%), Positives = 95/119 (79%)
Frame = +2
Query: 332 RTKSLSRNWPKKFDAFLASESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGT 511
+ K L + KK+DAF+ASE LIKQIPRLLGPGL+KAGKFP +SH + + KI EVK T
Sbjct: 94 KNKKLVKKLAKKYDAFIASEVLIKQIPRLLGPGLSKAGKFPSPVSHSDDLYGKIIEVKST 153
Query: 512 IKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPP 688
IKFQ+KKVLCL VAVGHVDM ++LA N+ L+INFLVSLLKK WQN+ SL +KSTMG P
Sbjct: 154 IKFQLKKVLCLGVAVGHVDMAEEQLAANLSLAINFLVSLLKKGWQNIGSLVIKSTMGKP 212
Score = 107 bits (257), Expect = 1e-24
Identities = 49/86 (56%), Positives = 60/86 (69%)
Frame = +1
Query: 55 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 234
SKVS + V +L+ S++KKRNF ETVELQIGLKNYDPQ+DKRFSGT+KL +PRP
Sbjct: 2 SKVSPANIRSSVETILKGSEEKKRNFTETVELQIGLKNYDPQRDKRFSGTIKLPNVPRPN 61
Query: 235 MQVCVLGDQQHCDEAKTLNVPCMDAE 312
M +C+LGD D AK V M +
Sbjct: 62 MSICILGDAHDLDRAKHGGVDAMSVD 87
>SPCC1183.08c |rpl101|rpl1-1, rpl10a-1|60S ribosomal protein
L10a|Schizosaccharomyces pombe|chr 3|||Manual
Length = 216
Score = 163 bits (396), Expect = 2e-41
Identities = 77/119 (64%), Positives = 95/119 (79%)
Frame = +2
Query: 332 RTKSLSRNWPKKFDAFLASESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGT 511
+ K L + KK+DAF+ASE LIKQIPRLLGPGL+KAGKFP +SH + + KI EVK T
Sbjct: 94 KNKKLVKKLAKKYDAFIASEVLIKQIPRLLGPGLSKAGKFPSPVSHADDLYGKITEVKST 153
Query: 512 IKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPP 688
IKFQ+KKVLCL VAVGHV+M+ ++L N+ L++NFLVSLLKK WQN+ SL +KSTMG P
Sbjct: 154 IKFQLKKVLCLGVAVGHVEMSEEQLIANIMLAVNFLVSLLKKGWQNIGSLVVKSTMGKP 212
Score = 105 bits (252), Expect = 6e-24
Identities = 49/86 (56%), Positives = 61/86 (70%)
Frame = +1
Query: 55 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 234
SKVS ++ V +L+ S++KKRNF ETVELQIGLKNYDPQ+DKRFSGT+KL +PRP
Sbjct: 2 SKVSVASVRSNVEQILKGSEEKKRNFTETVELQIGLKNYDPQRDKRFSGTIKLPNVPRPN 61
Query: 235 MQVCVLGDQQHCDEAKTLNVPCMDAE 312
M +C+LGD D AK V M +
Sbjct: 62 MAICILGDAHDLDRAKHGGVDAMSVD 87
>SPAC8F11.04 |||U3 snoRNP-associated protein Cic1/Utp30 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 373
Score = 46.0 bits (104), Expect = 5e-06
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Frame = +2
Query: 365 KFDAFLASESLIKQIPRLLGPGLNKAGKFPGLL----SHQESMTQKIDEVKGTIKFQMKK 532
+FD FLA + +I +PR+LG + K P + E + +++ G F
Sbjct: 136 QFDIFLADDRVIPMLPRILGKTFYQKSKVPVPVKISKGTAEQLKREVVSAYGATYFNSAP 195
Query: 533 VLCLSVAVGHVDMTPDELAQNVHLSINFLVS-LLKKHWQNVRSLHMKST 676
+ GHV T ELA+NV + F+ ++ + + S+H+K++
Sbjct: 196 CSSFMIKCGHVSNTSTELAENVESILQFVSKHIVPDGAKGIASIHLKTS 244
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 30.3 bits (65), Expect = 0.27
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +1
Query: 37 LTNKMSSKVSRDTLYE---CVNAVLQSSKDKKRNFLETVELQIGLKNYD-PQKDKRFSG 201
+T+K++ V ++ Y C N +++SS K NF +TV + +YD P+ D + G
Sbjct: 920 VTSKLNDLVIKEFTYPSSLCDNVLVRSSPSPKNNFDDTVFISYTSIDYDSPELDSVYEG 978
Score = 27.5 bits (58), Expect = 1.9
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Frame = +2
Query: 482 TQKIDEVKGTIKFQMKK----VLCLSVAVGHVDMTPDEL----AQNVHLSINFLVSLLKK 637
T++I+ GT+ V LS+A+G+++ P L N H+S+ L L+K
Sbjct: 2682 TERINNTDGTVVSSHNPFVFFVNVLSMAIGNINDAPVRLNALLMDNAHVSLRRLFELVKN 2741
Query: 638 HW 643
H+
Sbjct: 2742 HY 2743
>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1811
Score = 29.5 bits (63), Expect = 0.48
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 377 FLASESLIKQIPRLLGPGLNKA-GKFPGLLSHQESMTQKIDEVKGTI-KFQMKKVLCLSV 550
+LAS+ ++ R++G K F +++ S +DE++ + K + ++LC V
Sbjct: 1730 YLASQLVLHGFQRVIGDNPVKGVAAFQPVIAALVSYINSLDEIQFSRGKSEFYQLLCAIV 1789
Query: 551 AVGHVD 568
A GH+D
Sbjct: 1790 ACGHID 1795
>SPAC869.03c |||urea transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 661
Score = 28.3 bits (60), Expect = 1.1
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -2
Query: 582 SSGVMSTWPTATERHSTFFIWNLMVPLTSSIFC 484
S+G ++ T T R + F WN+++ +++FC
Sbjct: 236 STGYKGSYLTVTNRDAVFVGWNIVIGGFATVFC 268
>SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1131
Score = 27.1 bits (57), Expect = 2.6
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = +1
Query: 523 NEEGAVSFCSSWPCGHDS**ACSECASFHQLPCV 624
NE C W C D C++C ++ + CV
Sbjct: 257 NEPSNCKVCKKW-CAFDFSVQCADCKKYYHMDCV 289
>SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 584
Score = 27.1 bits (57), Expect = 2.6
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = -1
Query: 277 PRHNVAGLQERKLAFSAAVCILALQCRRNACPSVGHSSSDQFEALQSPKSYVSCP*RIEE 98
P H +A LQE A AA+ L+ ++NA G +S D +AL P S +
Sbjct: 317 PEHELAALQEHNEAHDAAMRQYELERQQNAM-LPGLASIDGLQAL--PHLDFSDSAVTNQ 373
Query: 97 RHSRTRRACH 68
HS+++ + H
Sbjct: 374 SHSQSQNSLH 383
>SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 701
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 568 HDS**ACSECASFHQLPCVTAQETLAEC 651
H S + S ++HQL CV Q+ L+EC
Sbjct: 52 HPSINSLSSFQTYHQLLCVLEQKHLSEC 79
>SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 561
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 642 QCFLSSDTRKLMERCTF*ASSSGVMSTWPTATERHST 532
+CF SD +KL +RC SS WP + +ST
Sbjct: 143 KCFHRSDVQKLSKRCDILFSSE-----WPEDVQENST 174
>SPAC18B11.05 |gpi18||pig-V|Schizosaccharomyces pombe|chr 1|||Manual
Length = 426
Score = 25.8 bits (54), Expect = 5.9
Identities = 8/40 (20%), Positives = 22/40 (55%)
Frame = +3
Query: 537 CVFL*QLAMWT*LLMSLLRMCIFPSTSLCHCSRNTGRMSD 656
C FL ++ + + + +C+F T++ + +N R+++
Sbjct: 37 CTFLLSTILYLGIAVIMSHLCVFDDTAMLYLRQNRSRLAE 76
>SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 693
Score = 25.8 bits (54), Expect = 5.9
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -1
Query: 502 DFINLLRHGLLVGEKTREFTSFVQTGTQQTGNLLDQ 395
D L RH L + + F + Q GT+ NL DQ
Sbjct: 424 DLFRLFRHSNLSTSREQIFQNLEQLGTRVIKNLTDQ 459
>SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 25.8 bits (54), Expect = 5.9
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -1
Query: 595 ILSKLIRSHVHMANCYRKTQHLLHLELNGSLD-FIN-LLRHGLLVGEKTREFTSFVQ 431
+L K++ + ++C+++ +HL+H+ L F N L+ L+ F FVQ
Sbjct: 1047 VLMKVVGVFANYSDCFQRNRHLVHMVLLCCTHVFYNQTLKPATLIDSALDVFLCFVQ 1103
>SPAC23H3.14 |||LAlv9 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 25.4 bits (53), Expect = 7.8
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 430 FEQSW*I-PWSSLPPGVHDAED**SQGNH*VPNEEGAV 540
F + W I P+ SLP G H +E PN+EG V
Sbjct: 36 FPKEWSILPFLSLPDGAHSSEKDFVYFTLPFPNDEGTV 73
>SPCC1739.04c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 288
Score = 25.4 bits (53), Expect = 7.8
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 46 KMSSKVSRDTLYECVNAVLQSSKDKKRNFLETV 144
K K DT+ E A LQSS DK NF +T+
Sbjct: 215 KRPDKSPFDTMTE---ATLQSSSDKSENFTKTL 244
>SPBC19C7.11 |||ClC chloride channel |Schizosaccharomyces pombe|chr
2|||Manual
Length = 812
Score = 25.4 bits (53), Expect = 7.8
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -2
Query: 363 FGQFLDKLFVLIQFFQSLSIHTWHIQGFSLVTML 262
+G+F+ +LF LIQ + + W + + VT++
Sbjct: 385 YGEFVMRLFFLIQKLRKKYLSRWGVLDAAFVTVI 418
>SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 809
Score = 25.4 bits (53), Expect = 7.8
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +1
Query: 88 VNAVLQSSKDKKRNFLETV 144
+NA+L+ SK+KK N +E++
Sbjct: 370 INALLERSKEKKANVIESL 388
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,993,013
Number of Sequences: 5004
Number of extensions: 61743
Number of successful extensions: 209
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 319939482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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