Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte16a14
         (602 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        25   0.76 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        25   0.76 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        25   0.76 
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       23   3.0  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.3  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.3  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 53  DNVNNVEICQISLTDIGR 106
           + VNNVE  Q  LTD+G+
Sbjct: 315 NGVNNVEAVQKELTDLGK 332


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 53  DNVNNVEICQISLTDIGR 106
           + VNNVE  Q  LTD+G+
Sbjct: 315 NGVNNVEAVQKELTDLGK 332


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 53  DNVNNVEICQISLTDIGR 106
           + VNNVE  Q  LTD+G+
Sbjct: 315 NGVNNVEAVQKELTDLGK 332


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 225 DWGNSDHRSDPEVLIFALHE 284
           D+GN D+R+D     FA  E
Sbjct: 120 DYGNQDNRNDRRKKTFAARE 139


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/37 (21%), Positives = 20/37 (54%)
 Frame = -3

Query: 414 MYIDRFKRESLPFFF*LNI*KLCVEFSKFKHVFYSGF 304
           + + R K+E +PF   L +  +  E++++    + G+
Sbjct: 604 LLLPRGKKEGMPFQLFLYVSPVSSEYNQYNSRIWGGY 640


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/37 (21%), Positives = 20/37 (54%)
 Frame = -3

Query: 414 MYIDRFKRESLPFFF*LNI*KLCVEFSKFKHVFYSGF 304
           + + R K+E +PF   L +  +  E++++    + G+
Sbjct: 604 LLLPRGKKEGMPFQLFLYVSPVSSEYNQYNSRIWGGY 640


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,433
Number of Sequences: 438
Number of extensions: 3639
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)