Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16a13
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81523-10|CAC70089.1| 171|Caenorhabditis elegans Hypothetical p... 30 1.2
Z72510-4|CAE17846.1| 116|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z81530-7|CAB04311.2| 292|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81077-3|CAB03067.1| 527|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical po... 28 5.0
U55373-9|AAV58870.1| 648|Caenorhabditis elegans Hypothetical pr... 28 5.0
U55373-8|AAD34666.1| 805|Caenorhabditis elegans Hypothetical pr... 28 5.0
U55373-7|AAC25890.2| 890|Caenorhabditis elegans Hypothetical pr... 28 5.0
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family... 28 6.6
Z71258-12|CAJ30220.1| 555|Caenorhabditis elegans Hypothetical p... 27 8.7
Z71258-8|CAD30427.1| 553|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z71258-7|CAA95782.2| 588|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z66522-6|CAH04737.1| 1147|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z66522-5|CAA91405.1| 1149|Caenorhabditis elegans Hypothetical pr... 27 8.7
U51136-1|AAA96057.1| 553|Caenorhabditis elegans CHR3 protein. 27 8.7
U13075-1|AAA96983.1| 553|Caenorhabditis elegans steroid hormone... 27 8.7
U00036-5|AAT92064.1| 446|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF332203-1|AAK17974.1| 588|Caenorhabditis elegans nuclear recep... 27 8.7
AF332202-1|AAK17973.1| 573|Caenorhabditis elegans nuclear recep... 27 8.7
>Z81523-10|CAC70089.1| 171|Caenorhabditis elegans Hypothetical
protein F32H2.10 protein.
Length = 171
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 286 AIRYILLHIEHSELNIRRFALKALAQLCQLPQGPEQVLADSANL 417
A +++ + H IR+FA A ++ PQ P Q++ DS +L
Sbjct: 66 APKFVSQLLTHRTTPIRKFAFAACLKILAHPQSPRQMMLDSYHL 109
>Z72510-4|CAE17846.1| 116|Caenorhabditis elegans Hypothetical
protein F53B7.7 protein.
Length = 116
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3
Query: 169 CEHSQELWCTDGRSDPSFPLTCSLFPFATVL 77
C S ++WC DG SD + TCSL A L
Sbjct: 15 CRDSHQMWCLDG-SDCAISNTCSLCEGAACL 44
>Z81530-7|CAB04311.2| 292|Caenorhabditis elegans Hypothetical
protein F46A8.10 protein.
Length = 292
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +1
Query: 166 HTSILLLESTEPEILCQTLRAITKFSAQDTQNRYILFDLDAIRYILLHIEHSELNIRR 339
HT + +L T ++ Q L + F+ +T NRY++ D+ R +L +E S R+
Sbjct: 74 HTILDVLAQTTSLMIVQCLEPLEIFTGIETPNRYVVHDM-YCRPLLYCMERSSFFARQ 130
>Z81077-3|CAB03067.1| 527|Caenorhabditis elegans Hypothetical
protein F36A2.2 protein.
Length = 527
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 310 IEHSELNIRRFALKALAQLCQLPQGPEQVLADSANLRKIAFMLVKVEDVFVLEFAS 477
++ SEL R F K AQL P + + R+ + LVK + V++F +
Sbjct: 81 VDQSELAFRMFTRKYGAQLTFTPMIHAHLFVNDGTYRRNSLALVKADRPLVVQFCA 136
>Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical
protein R07D5.1 protein.
Length = 522
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 373 LPQGPEQVLADSANLRKIAFMLVKVEDVFVLEFASLVLSELTREPL 510
LP P + +AD LRK ++ + VF+L S EL L
Sbjct: 448 LPDHPAKPIADDVTLRKFTNNFLRKDGVFMLRMISTHAGELMSSEL 493
>Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical
polypeptide protein.
Length = 522
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 373 LPQGPEQVLADSANLRKIAFMLVKVEDVFVLEFASLVLSELTREPL 510
LP P + +AD LRK ++ + VF+L S EL L
Sbjct: 448 LPDHPAKPIADDVTLRKFTNNFLRKDGVFMLRMISTHAGELMSSEL 493
>U55373-9|AAV58870.1| 648|Caenorhabditis elegans Hypothetical
protein F26F12.3c protein.
Length = 648
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 148 WCTDGRSDPSFPLTCSLF 95
WC +P FP+TCS F
Sbjct: 416 WCPKCEREPHFPMTCSAF 433
>U55373-8|AAD34666.1| 805|Caenorhabditis elegans Hypothetical
protein F26F12.3b protein.
Length = 805
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 148 WCTDGRSDPSFPLTCSLF 95
WC +P FP+TCS F
Sbjct: 573 WCPKCEREPHFPMTCSAF 590
>U55373-7|AAC25890.2| 890|Caenorhabditis elegans Hypothetical
protein F26F12.3a protein.
Length = 890
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 148 WCTDGRSDPSFPLTCSLF 95
WC +P FP+TCS F
Sbjct: 658 WCPKCEREPHFPMTCSAF 675
>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
protein 3 protein.
Length = 3343
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 2/24 (8%)
Frame = -3
Query: 508 VVLSSI-PRGLAT-QIPIRIHLPP 443
+V SSI P G+ + +PIRIHLPP
Sbjct: 491 IVTSSILPEGVTSYHLPIRIHLPP 514
>Z71258-12|CAJ30220.1| 555|Caenorhabditis elegans Hypothetical
protein C01H6.5f protein.
Length = 555
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 67 LKMAKPLQKERENRSAEKKDLTFHPYTITPE 159
L + P KE + E + FHP+TI E
Sbjct: 25 LSIETPKSKENDESGCESSNCMFHPHTIKSE 55
>Z71258-8|CAD30427.1| 553|Caenorhabditis elegans Hypothetical
protein C01H6.5b protein.
Length = 553
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 67 LKMAKPLQKERENRSAEKKDLTFHPYTITPE 159
L + P KE + E + FHP+TI E
Sbjct: 25 LSIETPKSKENDESGCESSNCMFHPHTIKSE 55
>Z71258-7|CAA95782.2| 588|Caenorhabditis elegans Hypothetical
protein C01H6.5a protein.
Length = 588
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 67 LKMAKPLQKERENRSAEKKDLTFHPYTITPE 159
L + P KE + E + FHP+TI E
Sbjct: 60 LSIETPKSKENDESGCESSNCMFHPHTIKSE 90
>Z66522-6|CAH04737.1| 1147|Caenorhabditis elegans Hypothetical protein
F14E5.2b protein.
Length = 1147
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 624 QQVAERLKTILLDIRV*AILHPREQCTQDI 535
+QVA RL+ L+DI + +LH E C DI
Sbjct: 1015 EQVARRLQESLVDIHLDPVLH--EACAMDI 1042
>Z66522-5|CAA91405.1| 1149|Caenorhabditis elegans Hypothetical protein
F14E5.2a protein.
Length = 1149
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 624 QQVAERLKTILLDIRV*AILHPREQCTQDI 535
+QVA RL+ L+DI + +LH E C DI
Sbjct: 1017 EQVARRLQESLVDIHLDPVLH--EACAMDI 1044
>U51136-1|AAA96057.1| 553|Caenorhabditis elegans CHR3 protein.
Length = 553
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 67 LKMAKPLQKERENRSAEKKDLTFHPYTITPE 159
L + P KE + E + FHP+TI E
Sbjct: 25 LSIETPKSKENDESGCESSNCMFHPHTIKSE 55
>U13075-1|AAA96983.1| 553|Caenorhabditis elegans steroid hormone
receptor familymember CHR3 protein.
Length = 553
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 67 LKMAKPLQKERENRSAEKKDLTFHPYTITPE 159
L + P KE + E + FHP+TI E
Sbjct: 25 LSIETPKSKENDESGCESSNCMFHPHTIKSE 55
>U00036-5|AAT92064.1| 446|Caenorhabditis elegans Hypothetical
protein R151.2d protein.
Length = 446
Score = 27.5 bits (58), Expect = 8.7
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Frame = +1
Query: 94 ERENRSAEKKDLTFHPYTITPES-----AHTSILLLES-TEPEILCQTLRAITKFSAQDT 255
++ NRSA + L HP PE S ES TEP + QT + + DT
Sbjct: 13 QKHNRSARNEFLGTHPTLPVPEDILDPFVGRSTRPTESLTEPPVATQTTQTVF-LKPSDT 71
Query: 256 QNRYILFDLDAIRYILLHIEHS 321
N+ I ++ + LH +HS
Sbjct: 72 PNQDISALDKSVDHSHLHKDHS 93
>AF332203-1|AAK17974.1| 588|Caenorhabditis elegans nuclear receptor
NHR-23 protein.
Length = 588
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 67 LKMAKPLQKERENRSAEKKDLTFHPYTITPE 159
L + P KE + E + FHP+TI E
Sbjct: 60 LSIETPKSKENDESGCESSNCMFHPHTIKSE 90
>AF332202-1|AAK17973.1| 573|Caenorhabditis elegans nuclear receptor
NHR-23 protein.
Length = 573
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 67 LKMAKPLQKERENRSAEKKDLTFHPYTITPE 159
L + P KE + E + FHP+TI E
Sbjct: 45 LSIETPKSKENDESGCESSNCMFHPHTIKSE 75
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,441,454
Number of Sequences: 27780
Number of extensions: 248924
Number of successful extensions: 729
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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