Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16a12
(681 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC011874-1|AAH11874.2| 536|Homo sapiens WD repeat domain 34 pro... 47 5e-05
AL356481-7|CAM14249.1| 272|Homo sapiens WD repeat domain 34 pro... 46 1e-04
AL356481-6|CAH71407.1| 536|Homo sapiens WD repeat domain 34 pro... 46 1e-04
BC001614-1|AAH01614.2| 419|Homo sapiens WDR34 protein protein. 33 0.94
BC022537-1|AAH22537.1| 365|Homo sapiens family with sequence si... 33 1.2
BC045639-1|AAH45639.2| 644|Homo sapiens SUMO1/sentrin specific ... 31 3.8
AY172978-1|AAO23914.1| 584|Homo sapiens POTE protein. 31 3.8
AF149770-1|AAF31171.1| 643|Homo sapiens sentrin/SUMO-specific p... 31 3.8
AL731868-7|CAI40830.1| 1501|Homo sapiens myeloid/lymphoid or mix... 30 6.6
AL161973-1|CAB82312.1| 1410|Homo sapiens hypothetical protein pr... 30 6.6
AL049698-5|CAI42816.1| 1501|Homo sapiens myeloid/lymphoid or mix... 30 6.6
>BC011874-1|AAH11874.2| 536|Homo sapiens WD repeat domain 34
protein.
Length = 536
Score = 47.2 bits (107), Expect = 5e-05
Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 2/178 (1%)
Frame = +3
Query: 129 AVKKTEDASTGTQTTEFFEAAVATQTVAYKDGSSMT-SPTEDLTTKDVKYSAANLNAFLQ 305
AV+ + QT A+ + Q + D T +P +Y L AFL+
Sbjct: 54 AVQGIRGETKSCQTASIATASASAQARNHVDAQVQTEAPVPVSVQPPSQYDIPRLAAFLR 113
Query: 306 RVMPGMLEQLDEN-KENAYESSESDEDNEILTAKLVQELKVREVQGSGDQALSVLDLSWS 482
RV ++ +L++N + +A++ E + + + L Q G L V +SW+
Sbjct: 114 RVEAMVIRELNKNWQSHAFDGFEVNWTEQQQMVSCLYTLGYPPAQAQG---LHVTSISWN 170
Query: 483 NTGNSLAVSLGQKQHENWCTDNGLIRFYTVKVSAGDKLVHSMDINEKNCVSVLKYHPS 656
+TG+ +A + G+ H +W T + + + S + + V L +HP+
Sbjct: 171 STGSVVACAYGRLDHGDWSTLKSFVCAWNLDRRDLRPQQPSAVVEVPSAVLCLAFHPT 228
>AL356481-7|CAM14249.1| 272|Homo sapiens WD repeat domain 34
protein.
Length = 272
Score = 46.0 bits (104), Expect = 1e-04
Identities = 37/166 (22%), Positives = 70/166 (42%), Gaps = 2/166 (1%)
Frame = +3
Query: 165 QTTEFFEAAVATQTVAYKDGSSMT-SPTEDLTTKDVKYSAANLNAFLQRVMPGMLEQLDE 341
QT A+ + Q + D T +P +Y L AFL+RV ++ +L++
Sbjct: 57 QTASIATASASAQARNHVDAQVQTEAPVPVSVQPPSQYDIPRLAAFLRRVEAMVIRELNK 116
Query: 342 N-KENAYESSESDEDNEILTAKLVQELKVREVQGSGDQALSVLDLSWSNTGNSLAVSLGQ 518
N + +A++ E + + + L Q G L V +SW++TG+ +A + G+
Sbjct: 117 NWQSHAFDGFEVNWTEQQQMVSCLYTLGYPPAQAQG---LHVTSISWNSTGSVVACAYGR 173
Query: 519 KQHENWCTDNGLIRFYTVKVSAGDKLVHSMDINEKNCVSVLKYHPS 656
H +W T + + + S + + V L +HP+
Sbjct: 174 LDHGDWSTLKSFVCAWNLDRRDLRPQQPSAVVEVPSAVLCLAFHPT 219
>AL356481-6|CAH71407.1| 536|Homo sapiens WD repeat domain 34
protein.
Length = 536
Score = 46.0 bits (104), Expect = 1e-04
Identities = 37/166 (22%), Positives = 70/166 (42%), Gaps = 2/166 (1%)
Frame = +3
Query: 165 QTTEFFEAAVATQTVAYKDGSSMT-SPTEDLTTKDVKYSAANLNAFLQRVMPGMLEQLDE 341
QT A+ + Q + D T +P +Y L AFL+RV ++ +L++
Sbjct: 66 QTASIATASASAQARNHVDAQVQTEAPVPVSVQPPSQYDIPRLAAFLRRVEAMVIRELNK 125
Query: 342 N-KENAYESSESDEDNEILTAKLVQELKVREVQGSGDQALSVLDLSWSNTGNSLAVSLGQ 518
N + +A++ E + + + L Q G L V +SW++TG+ +A + G+
Sbjct: 126 NWQSHAFDGFEVNWTEQQQMVSCLYTLGYPPAQAQG---LHVTSISWNSTGSVVACAYGR 182
Query: 519 KQHENWCTDNGLIRFYTVKVSAGDKLVHSMDINEKNCVSVLKYHPS 656
H +W T + + + S + + V L +HP+
Sbjct: 183 LDHGDWSTLKSFVCAWNLDRRDLRPQQPSAVVEVPSAVLCLAFHPT 228
>BC001614-1|AAH01614.2| 419|Homo sapiens WDR34 protein protein.
Length = 419
Score = 33.1 bits (72), Expect = 0.94
Identities = 17/69 (24%), Positives = 32/69 (46%)
Frame = +3
Query: 450 QALSVLDLSWSNTGNSLAVSLGQKQHENWCTDNGLIRFYTVKVSAGDKLVHSMDINEKNC 629
Q L V +SW++TG+ +A + G+ H +W T + + + S + +
Sbjct: 43 QGLHVTSISWNSTGSVVACAYGRLDHGDWSTLKSFVCAWNLDRRDLRPQQPSAVVEVPSA 102
Query: 630 VSVLKYHPS 656
V L +HP+
Sbjct: 103 VLCLAFHPT 111
>BC022537-1|AAH22537.1| 365|Homo sapiens family with sequence
similarity 81, member A protein.
Length = 365
Score = 32.7 bits (71), Expect = 1.2
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +3
Query: 324 LEQLDENKENAYESSESDEDNEILTAKLVQELKVREVQGSGDQALSVLDLSWSNTGNSLA 503
+ +L + YE + + E AKL+ E K+++ +G Q L+ +DLS S L
Sbjct: 140 IARLSAEHKTTYEGLQH-LNKEQQAAKLILETKIKDAEGQISQLLNRVDLSISEQSTKLK 198
Query: 504 VSLGQKQHE 530
+S H+
Sbjct: 199 MSHRDSNHQ 207
>BC045639-1|AAH45639.2| 644|Homo sapiens SUMO1/sentrin specific
peptidase 1 protein.
Length = 644
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +3
Query: 84 NLSGYDSEAVGFDSVAVKKTEDASTGTQTTEFFEA 188
NL+ ++++ G DSV + K +D+ T T ++ FF+A
Sbjct: 304 NLAASNTQSEGSDSVILLKVKDSQTPTPSSTFFQA 338
>AY172978-1|AAO23914.1| 584|Homo sapiens POTE protein.
Length = 584
Score = 31.1 bits (67), Expect = 3.8
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Frame = +3
Query: 327 EQLDENKENAYESSESDEDNEILTAKLVQELKVREVQGSGDQALSVL---DLSWSNT--G 491
EQ D K+ + E + +EILT K Q ++V E + + + +LS DL N+
Sbjct: 472 EQNDTRKQLSEEQNTGISQDEILTNKQKQ-IEVAEQKMNSELSLSHKKEEDLLRENSVLQ 530
Query: 492 NSLAV---SLGQKQHENWCTDNGLIRFYTVKVSAGDKLVHSMDINEK 623
+AV L + +H+N +N ++ DKL+ +M +NE+
Sbjct: 531 EEIAVLRLELDETKHQNQLRENKILEEIESVKEKTDKLLRAMQLNEE 577
>AF149770-1|AAF31171.1| 643|Homo sapiens sentrin/SUMO-specific
protease protein.
Length = 643
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +3
Query: 84 NLSGYDSEAVGFDSVAVKKTEDASTGTQTTEFFEA 188
NL+ ++++ G DSV + K +D+ T T ++ FF+A
Sbjct: 304 NLAASNTQSEGSDSVILLKVKDSQTPTPSSTFFQA 338
>AL731868-7|CAI40830.1| 1501|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila);
tra protein.
Length = 1501
Score = 30.3 bits (65), Expect = 6.6
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +3
Query: 327 EQLDENKENAYESSESDEDNEILTAKLVQELKVREVQGSGDQALSVLDL 473
++L E+K+ E E +ED+++ T ++Q L+ + A+SVLDL
Sbjct: 1234 KRLQESKQKD-EDDEEEEDDDVDTMLIMQRLEAERRARTAMPAISVLDL 1281
>AL161973-1|CAB82312.1| 1410|Homo sapiens hypothetical protein
protein.
Length = 1410
Score = 30.3 bits (65), Expect = 6.6
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +3
Query: 327 EQLDENKENAYESSESDEDNEILTAKLVQELKVREVQGSGDQALSVLDL 473
++L E+K+ E E +ED+++ T ++Q L+ + A+SVLDL
Sbjct: 1234 KRLQESKQKD-EDDEEEEDDDVDTMLIMQRLEAERRARTAMPAISVLDL 1281
>AL049698-5|CAI42816.1| 1501|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila);
tra protein.
Length = 1501
Score = 30.3 bits (65), Expect = 6.6
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +3
Query: 327 EQLDENKENAYESSESDEDNEILTAKLVQELKVREVQGSGDQALSVLDL 473
++L E+K+ E E +ED+++ T ++Q L+ + A+SVLDL
Sbjct: 1234 KRLQESKQKD-EDDEEEEDDDVDTMLIMQRLEAERRARTAMPAISVLDL 1281
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,732,002
Number of Sequences: 237096
Number of extensions: 1723508
Number of successful extensions: 4178
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4178
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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