Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte16a09
(718 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 31 0.22
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 30 0.38
SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase Gut2|Schi... 28 1.5
SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy... 27 2.0
SPAC29E6.04 |nnf1|SPAC30.08|kinetochore protein Nnf1|Schizosacch... 27 2.7
SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 2.7
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 3.5
SPAC10F6.17c ||SPAC56E4.01c|mitochondrial pyruvate dehydrogenase... 26 4.7
SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|c... 26 6.2
SPCC16C4.02c |||DUF1941 family protein|Schizosaccharomyces pombe... 26 6.2
SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces p... 26 6.2
SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |S... 25 8.2
SPAP8A3.09c |paa1||protein phosphatase regulatory subunit Paa1|S... 25 8.2
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 30.7 bits (66), Expect = 0.22
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +2
Query: 251 ETIDLSWYESSNSILKMTGPEKIYEELTAMQPLSYMAVDVCSKLVGFEPLARTLRQDYDV 430
E +L WYE +LK +K T + LS A+D+C KL+ P R ++
Sbjct: 502 EVKNLPWYE----LLKPVEEKKSRFVETFKEILSPAAIDLCQKLLALNPFCRP--SAHET 555
Query: 431 ILVENFNSD 457
++ E F S+
Sbjct: 556 LMHEYFTSE 564
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 29.9 bits (64), Expect = 0.38
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Frame = +2
Query: 71 AKILGLFPHTGKSHQMVFDPLLR------RLAEKGHHVTVVSFFPVKNPPANYTNISLES 232
A++L F K+H+++ DP LR RL E G V+ F P K+ P N +IS +
Sbjct: 49 AEVLPQFQLIQKAHEVLKDPKLRELFDQRRLLEAGRPDGVLRFRPKKSGPKN--DISTKV 106
Query: 233 LAKLGV 250
+K+ V
Sbjct: 107 ASKVSV 112
>SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase
Gut2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 649
Score = 27.9 bits (59), Expect = 1.5
Identities = 20/89 (22%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +2
Query: 416 QDYDVILVENFNSDCMLG--LAHIYGQKAPIIALLSSSLMDWSPSRIGVSDNPSYVPIVT 589
++Y L+ ++ L L+H YG +AP+I L S D++ + ++D + P
Sbjct: 489 KNYSARLIHEYHIPLRLAKHLSHNYGSRAPLILELYSK-TDFNKLPVTLADKEVFAPSSD 547
Query: 590 STFTTPMSFVQRLKN-TVLNIYYKLWFRY 673
++ +S+ + TV + Y + + Y
Sbjct: 548 ASSDKSVSYASFDEPFTVAELKYSIKYEY 576
>SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 384
Score = 27.5 bits (58), Expect = 2.0
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +1
Query: 55 TRSRVRENIRPFPAHRQKPSNGVRPFIEKIGGERPPCYCSILFSRQKSPSKLHEHQPR 228
+R R ++ R F H Q+PSN I+ IG SI + + K +QP+
Sbjct: 140 SRLRAEQHKRRFGVHSQQPSNS----IQTIGYSNSDAIKSIAWKEKDKSIKTWNYQPK 193
>SPAC29E6.04 |nnf1|SPAC30.08|kinetochore protein
Nnf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 205
Score = 27.1 bits (57), Expect = 2.7
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 473 AHIYGQKAPIIALLSSSLMDWSPSRIGVSDNPSYVPIVTSTFTTPM-SFVQRLKNTVLNI 649
AH+Y K ++ L+ L+D G+S + T + M S +Q+L+ TV +
Sbjct: 107 AHLYSHKRELLDKLNQDLLDIDKENEGLSTQIAAEEKATEDCISRMQSLIQKLEKTVYGM 166
Query: 650 YYK 658
K
Sbjct: 167 NEK 169
>SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 646
Score = 27.1 bits (57), Expect = 2.7
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +2
Query: 206 NYTNISLESLAKLGVETIDLSWYESSNSIL--KMTGPEKIYEELTAMQPLSYMAVDVCSK 379
N + L+S K+ ++TIDL Y+SS S + + GP Y ++ + + + + SK
Sbjct: 181 NLSRTDLKSSLKIILQTIDLFKYDSSFSSIYFRKDGP---YHKVEKLLKSANIRSSLNSK 237
Query: 380 LVG-FEPLARTLRQDYDVILVENFNSDCML 466
F L L +DY L +S CML
Sbjct: 238 TFNDFRTLFLLLIRDYS--LFHGNSSHCML 265
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 482 YGQKAPIIALLSSSLMDWSPSRIGVSDNPSYVPIVTSTFTTPMS 613
YG +A + + S+L+ SP+ G S+ P+Y P + ++ +S
Sbjct: 481 YGSRAALSSRSQSNLL--SPTSTGASNQPNYSPFADNPSSSNVS 522
Score = 26.2 bits (55), Expect = 4.7
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 515 SSSLMDWSPSRIGVSDNPSYVPIVTSTFTTPMS 613
SSS M S S +S + S P+ +S+FT+P S
Sbjct: 44 SSSSMLSSSSATAISSSSSSSPLSSSSFTSPAS 76
>SPAC10F6.17c ||SPAC56E4.01c|mitochondrial pyruvate dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 444
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 202 WGIFDGKKGYYSNMVAFLRQ 143
WGIFDG G+ N FLRQ
Sbjct: 117 WGIFDGHSGW--NTSLFLRQ 134
>SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 796
Score = 25.8 bits (54), Expect = 6.2
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 209 YTNISLESLAKLGVETIDLSWYESSNSILKMTGPEKIYE 325
Y +I L + KLG+ T+ S Y S N + PE++ E
Sbjct: 297 YWSIYLSNCKKLGISTLPPSNYLSPNRAELESTPEQLLE 335
>SPCC16C4.02c |||DUF1941 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 548
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +2
Query: 587 TSTFTTPMSFVQRLKNTVLNIYYKLWFRYAIQLKEKEIIENHY 715
TS F + ++ + +L N N+ +K W R ++ ++ ++ HY
Sbjct: 79 TSKFVS-LTMLAKLLNDHPNLIFKCWERMDMKFLDRLLLSTHY 120
>SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 417
Score = 25.8 bits (54), Expect = 6.2
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -2
Query: 639 TVFFNLCTNDIGVVNVEVTIG 577
T + NLC N +G +V+ T+G
Sbjct: 248 TAYDNLCENGVGTASVQNTLG 268
>SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1842
Score = 25.4 bits (53), Expect = 8.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 185 PVKNPPANYTNISLESLAKLGVETIDLSWYESS 283
P+ + N L S +KLG+ET+ WY S
Sbjct: 783 PLSPNHGTFGNDGLYSESKLGLETLFNRWYSES 815
>SPAP8A3.09c |paa1||protein phosphatase regulatory subunit
Paa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 590
Score = 25.4 bits (53), Expect = 8.2
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -3
Query: 575 RMMDYLIPQYDSETNPLTSLIIRL*LALSDRI-YVPGPAYSHC*NSPLK 432
R D LIP D + ++ L L + + YV GP Y+H SPL+
Sbjct: 46 RTRDELIPFLDESIDDEDEVLSALADQLGNFVDYVGGPEYAHVLLSPLE 94
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,136,668
Number of Sequences: 5004
Number of extensions: 69621
Number of successful extensions: 220
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 220
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 335201398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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