Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15p22
         (668 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z19155-4|CAA79560.3|  844|Caenorhabditis elegans Hypothetical pr...    30   1.3  
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr...    30   1.7  
AF025465-9|AAB71020.2|  136|Caenorhabditis elegans Hypothetical ...    29   2.3  
Z74038-6|CAA98496.1|  423|Caenorhabditis elegans Hypothetical pr...    29   3.0  
AC090999-3|AAK26147.1|  536|Caenorhabditis elegans Hypothetical ...    28   5.2  
Z74036-5|CAA98489.3|  171|Caenorhabditis elegans Hypothetical pr...    28   6.9  
AY190131-1|AAO33925.1|  171|Caenorhabditis elegans CNB-1 protein.      28   6.9  
Z81503-2|CAB04112.1|  517|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AF068717-4|AAC17764.2|  357|Caenorhabditis elegans Serpentine re...    27   9.1  
AC024812-8|AAF59557.4|  912|Caenorhabditis elegans Hypothetical ...    27   9.1  

>Z19155-4|CAA79560.3|  844|Caenorhabditis elegans Hypothetical
           protein F54G8.5 protein.
          Length = 844

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = +2

Query: 188 YEHQEELWKEAFKNKSNVKVYSE--YQDEKYDIYTKIPCTMIVDSVHQMFYSLGSNKFMK 361
           Y    E W + F+ K+  K YSE  + DE +    K P     + +   F  +G  + MK
Sbjct: 561 YSSPSEFWLDPFEKKNRGKKYSESDFSDELHTFLAKEPHLKFRNDIR--FTMMGKIEAMK 618

Query: 362 LLKRLQ 379
           ++ R++
Sbjct: 619 MMFRVR 624


>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical
           protein F42C5.10 protein.
          Length = 1292

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 16/62 (25%), Positives = 24/62 (38%)
 Frame = +2

Query: 200 EELWKEAFKNKSNVKVYSEYQDEKYDIYTKIPCTMIVDSVHQMFYSLGSNKFMKLLKRLQ 379
           E ++ E     S   VYS   + KYD  T  P  + +   +  +Y      F+      Q
Sbjct: 320 EHIYDEPIHRTSTTNVYSSTYERKYDFKTTFPPEIEMPEGYHDYYDPSKFMFLDAKGYYQ 379

Query: 380 GN 385
           GN
Sbjct: 380 GN 381


>AF025465-9|AAB71020.2|  136|Caenorhabditis elegans Hypothetical
           protein K02E7.11 protein.
          Length = 136

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
 Frame = +2

Query: 92  PILLIEDDIN----VNTLPLLFALLEDEKNVINFHIY 190
           PILL+   IN    ++++  L  +L+D+K  + FHIY
Sbjct: 51  PILLVLVTINFLWFISSISALICVLQDQKRYLRFHIY 87


>Z74038-6|CAA98496.1|  423|Caenorhabditis elegans Hypothetical
           protein F58B4.5 protein.
          Length = 423

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -1

Query: 335 NKTFDEQNLLS*YMVSLYICHIFHLGI 255
           +K FD++N L  Y++S Y  +I H+G+
Sbjct: 141 SKPFDDENKLKAYLISEYYPNIHHIGM 167


>AC090999-3|AAK26147.1|  536|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.7 protein.
          Length = 536

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -3

Query: 498 LLSKLITALAM*FICILSFDECAIQSL 418
           L ++LIT   +  IC+LS D CA QSL
Sbjct: 40  LNAQLITITNLYGICVLSTDRCACQSL 66


>Z74036-5|CAA98489.3|  171|Caenorhabditis elegans Hypothetical
           protein F55C10.1 protein.
          Length = 171

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
 Frame = +2

Query: 335 SLGSNKFMKLLKRLQGNPCVERIIIILHKDCMAHSSKLRIHMNYIANAVISFDSNNVLKA 514
           SL   +FM L   LQ NP V+R+I I  +D        R  +  I+   +  D N  LK 
Sbjct: 37  SLSVEEFMSL-PELQQNPLVQRVIDIFDEDGNGEVD-FREFIQGISQFSVKGDKNTKLKF 94

Query: 515 LINIKKGAK--FIKTEEIFSL 571
              I    +  FI   E+F +
Sbjct: 95  AFRIYDMDRDGFISNGELFQV 115


>AY190131-1|AAO33925.1|  171|Caenorhabditis elegans CNB-1 protein.
          Length = 171

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
 Frame = +2

Query: 335 SLGSNKFMKLLKRLQGNPCVERIIIILHKDCMAHSSKLRIHMNYIANAVISFDSNNVLKA 514
           SL   +FM L   LQ NP V+R+I I  +D        R  +  I+   +  D N  LK 
Sbjct: 37  SLSVEEFMSL-PELQQNPLVQRVIDIFDEDGNGEVD-FREFIQGISQFSVKGDKNTKLKF 94

Query: 515 LINIKKGAK--FIKTEEIFSL 571
              I    +  FI   E+F +
Sbjct: 95  AFRIYDMDRDGFISNGELFQV 115


>Z81503-2|CAB04112.1|  517|Caenorhabditis elegans Hypothetical
           protein F14F7.2 protein.
          Length = 517

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 23/103 (22%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
 Frame = +2

Query: 239 VKVYSEYQDEKYDIYTKIPCTMIVDS---VHQMFYSLGSNKFMKLLKRLQGNPCVERIII 409
           +K ++    + Y I   +  T+++     +H++F     N + + L  +QG+P  E+ + 
Sbjct: 56  LKKWTSQYGKVYGITEGLLRTLVISDTNLIHEVFVKQYDNFYGRNLNPIQGDPNREKRVT 115

Query: 410 ILHKDCMAHSSKLRIHMNYIANAVISFDSNNVLKALINIKKGA 538
           +       H  K    +  IAN   +F SNN+ K  + ++  A
Sbjct: 116 LF--SAQGHRWK---RLRTIANP--TFSSNNLRKIQVTVEDSA 151


>AF068717-4|AAC17764.2|  357|Caenorhabditis elegans Serpentine
           receptor, class w protein144 protein.
          Length = 357

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
 Frame = -3

Query: 573 HNEKISSVFINLAPFLILINAFKTLLLSKLITALAM*FICILSFDECAIQSLCKIIIILS 394
           H   ++S+FIN+  FLILI+  K L  S +   +A  FI I  FD C++    K +   S
Sbjct: 41  HYLSVASIFINIFHFLILIH--KPLRSSSINIIMA--FIAI--FDICSMFYKMKQVYGRS 94

Query: 393 TQGL--PCNRFNSFINLFDPR 337
            + +  PC +   +++++  +
Sbjct: 95  IEYIFDPCLQSKWYLDVYSEK 115


>AC024812-8|AAF59557.4|  912|Caenorhabditis elegans Hypothetical
           protein Y54E10BR.1 protein.
          Length = 912

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = -3

Query: 570 NEKISSVFINL-APFLILINAFKTLLLSKLITALAM*FICILSFDECAIQSLCKIIIILS 394
           N    ++FI++ +PF + I     LL+  L+   A  F  I+ FD+ +IQ LC   +I +
Sbjct: 777 NPSTLNLFISVFSPFTMAILLILKLLIPILLVTSA--FASIVRFDQESIQRLCCFSLIFT 834


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,265,184
Number of Sequences: 27780
Number of extensions: 270139
Number of successful extensions: 750
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)