Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15p14
(503 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34041| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_35730| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.025
SB_39159| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.10
SB_57604| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.54
SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.54
SB_14763| Best HMM Match : Zona_pellucida (HMM E-Value=0) 31 0.71
SB_12715| Best HMM Match : Adeno_E1A (HMM E-Value=1.3) 31 0.71
SB_24814| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.94
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.94
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 29 1.6
SB_19088| Best HMM Match : PSGP (HMM E-Value=2.5) 29 1.6
SB_23760| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_18084| Best HMM Match : DUF801 (HMM E-Value=0.37) 29 2.9
SB_13424| Best HMM Match : Pox_A32 (HMM E-Value=0.073) 29 2.9
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 29 2.9
SB_15137| Best HMM Match : SRCR (HMM E-Value=4.9e-28) 28 3.8
SB_10387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_10056| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=7.7e-05) 28 3.8
SB_35264| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_34931| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.46) 28 3.8
SB_55826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_50209| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_34373| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_22002| Best HMM Match : zf-C2H2 (HMM E-Value=1.7e-25) 27 6.6
SB_386| Best HMM Match : zf-C2H2 (HMM E-Value=1.7e-25) 27 6.6
SB_31502| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_4617| Best HMM Match : Extensin_2 (HMM E-Value=0.38) 27 6.6
SB_38413| Best HMM Match : Peptidase_C5 (HMM E-Value=0.26) 27 8.8
SB_5102| Best HMM Match : Peptidase_C5 (HMM E-Value=0.34) 27 8.8
>SB_34041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 951
Score = 39.9 bits (89), Expect = 0.001
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
Frame = +2
Query: 86 QNDTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHXSS 265
+ND + + G ++NS K+ S P EN V K KT+ S + +N +DD
Sbjct: 659 KNDLNQNRKASMSGKADNSRKTSSGGPV-GNENTVDKGKTKIKSKQQGWFVNSTDDSTGG 717
Query: 266 ASLATTKQRSTATLDKDVAASSS-NIDLYHYLRAPENASVASSVTLNGESETN 421
+ + R + K +A + ++ + N S A+ T NG S TN
Sbjct: 718 IIVKDSTPRKASIPGKQKSAGDEVSTNVRNISVNGSNRSTANEKTSNGTSNTN 770
>SB_35730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 35.5 bits (78), Expect = 0.025
Identities = 24/123 (19%), Positives = 58/123 (47%)
Frame = +2
Query: 80 SVQNDTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHX 259
+V + + R S+ ++++S S S+ + + + + +SSN S + S
Sbjct: 43 AVSSSSSRSSSNSNNSSNSSSSSSSSSNSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSS 102
Query: 260 SSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASSVTLNGESETNCKQNDS 439
SS+S +++ S+++ ++SSS+ + ++S +SS + + S ++ + S
Sbjct: 103 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 162
Query: 440 LXS 448
S
Sbjct: 163 SNS 165
Score = 34.3 bits (75), Expect = 0.058
Identities = 25/123 (20%), Positives = 55/123 (44%)
Frame = +2
Query: 80 SVQNDTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHX 259
S + + S + +S++S S S+ + + + + NSS+ S + S
Sbjct: 120 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSS 179
Query: 260 SSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASSVTLNGESETNCKQNDS 439
SS+S +++ S+++ ++SSS+ + + S +SS + + S ++ N S
Sbjct: 180 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSNNSS 239
Query: 440 LXS 448
S
Sbjct: 240 SSS 242
Score = 33.1 bits (72), Expect = 0.13
Identities = 22/113 (19%), Positives = 55/113 (48%)
Frame = +2
Query: 110 SHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHXSSASLATTKQ 289
++ + +S++S S S+ + + + + NSS+ S + S SS+S +++
Sbjct: 56 NNSSNSSSSSSSSSNSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSSSSSSSSS 115
Query: 290 RSTATLDKDVAASSSNIDLYHYLRAPENASVASSVTLNGESETNCKQNDSLXS 448
S+++ ++SSS+ + ++S +SS + + S ++ ++S S
Sbjct: 116 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSNSSSS 168
Score = 31.1 bits (67), Expect = 0.54
Identities = 25/123 (20%), Positives = 56/123 (45%)
Frame = +2
Query: 80 SVQNDTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHX 259
S + + S + +S++S S S+ + + + + +SSN S + S
Sbjct: 117 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSS 176
Query: 260 SSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASSVTLNGESETNCKQNDS 439
SS+S +++ S+++ ++SSS+ + ++S +SS + N S ++ + S
Sbjct: 177 SSSSSSSSSSSSSSSSSSSSSSSSSSSS------SSSSSSSSSSSSSNSSSSSSSSSSSS 230
Query: 440 LXS 448
S
Sbjct: 231 SSS 233
Score = 28.7 bits (61), Expect = 2.9
Identities = 20/98 (20%), Positives = 42/98 (42%)
Frame = +2
Query: 44 SCEMPNTRRRRFSVQNDTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSN 223
S N+ S + + S + +S++S S S+ + + + + +SSN
Sbjct: 159 SSSSSNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSN 218
Query: 224 EICSLNVSDDHXSSASLATTKQRSTATLDKDVAASSSN 337
S + S SS+S + S+++ ++SSS+
Sbjct: 219 SSSSSSSSSSSSSSSSSNNSSSSSSSSSSSSSSSSSSS 256
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/86 (19%), Positives = 40/86 (46%)
Frame = +2
Query: 80 SVQNDTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHX 259
S + + S + +S++S S S+ + + + + NSS+ S + S
Sbjct: 174 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSS 233
Query: 260 SSASLATTKQRSTATLDKDVAASSSN 337
SS + +++ S+++ ++SSS+
Sbjct: 234 SSNNSSSSSSSSSSSSSSSSSSSSSS 259
>SB_39159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 33.5 bits (73), Expect = 0.10
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Frame = +2
Query: 41 ISCEMPNT--RRRRFSVQNDTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPN 214
+SC + N R + +Q++ Q+ K+H S + + VQK K +
Sbjct: 358 VSCSIINIDDRGTQKKLQDEVQKGKAHVDCDVSCSMVNIDDQGSQKILHDEVQKGKAHVD 417
Query: 215 SSNEICSLNVSDDHXSSASLATTKQRSTATLDKDVAASSSNID 343
+N+ DD + L Q+ TA +D DV+ S NID
Sbjct: 418 CDVSCSIINI-DDRGTQKILQDEVQKGTAHIDGDVSCSMINID 459
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +2
Query: 248 DDHXSSASLATTKQRSTATLDKDVAASSSNID 343
DD S L QR TA +D DV+ S NID
Sbjct: 335 DDQGSQKILQDEVQRGTAHIDGDVSCSIINID 366
>SB_57604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 31.1 bits (67), Expect = 0.54
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -1
Query: 224 HWNC*DVSCSFVHNFLXHGRGARTS-ICSCYWRRPSLGETSVVV 96
+WN V CSFVH+ + HG G T+ C WR+ ++ + +V+
Sbjct: 566 NWND-QVVCSFVHDLVCHGAGRDTAQRRRCPWRQCAVKQHHLVL 608
>SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 31.1 bits (67), Expect = 0.54
Identities = 23/107 (21%), Positives = 49/107 (45%)
Frame = +2
Query: 80 SVQNDTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHX 259
S + + S +S+NS + ++ + + N +SSN + N S +
Sbjct: 137 SSSSSSSSSSSSSGSSSSSNSNSNSNSNSSSSSNSSSNSNSNSSSSSNSSSNSNSSSNSS 196
Query: 260 SSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASSVTL 400
SS++ ++ RS+++ + SSS+ R+ ++SVA +V +
Sbjct: 197 SSSNSSSNSSRSSSSSSNSNSNSSSSSS-----RSSSSSSVAVAVAV 238
Score = 29.1 bits (62), Expect = 2.2
Identities = 19/99 (19%), Positives = 46/99 (46%)
Frame = +2
Query: 41 ISCEMPNTRRRRFSVQNDTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSS 220
++C ++ S + + + + +S++S S S+ ++ N + + NSS
Sbjct: 113 VTCTSSSSSNSSRSSSSSSNSNSNSSSSSSSSSSSSSGSSSSSNSNSNSNSNSSSSSNSS 172
Query: 221 NEICSLNVSDDHXSSASLATTKQRSTATLDKDVAASSSN 337
+ S + S + SS S +++ S++ + + SSS+
Sbjct: 173 SNSNSNSSSSSNSSSNSNSSSNSSSSSNSSSNSSRSSSS 211
Score = 29.1 bits (62), Expect = 2.2
Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Frame = +2
Query: 44 SCEMPNTRRRRFSVQNDTQRPKSHRARGASNNSYKSKSALPD-HAGENCVQKNKTRPNSS 220
S N+ R S N S + +S++S S S+ + ++ N + + NS+
Sbjct: 117 SSSSSNSSRSSSSSSNSNSNSSSSSSSSSSSSSGSSSSSNSNSNSNSNSSSSSNSSSNSN 176
Query: 221 NEICSLNVSDDHXSSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASSVTL 400
+ S + S + +S+S +++ S++ + ++SSSN + + + +S +SSV +
Sbjct: 177 SNSSSSSNSSSNSNSSSNSSSSSNSSSNSSRS-SSSSSNSNS-NSSSSSSRSSSSSSVAV 234
Score = 27.5 bits (58), Expect = 6.6
Identities = 27/123 (21%), Positives = 52/123 (42%)
Frame = +2
Query: 80 SVQNDTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHX 259
S +++ R S + SN+S S S+ +G + +SSN + N +
Sbjct: 118 SSSSNSSRSSSSSSNSNSNSSSSSSSSSSSSSGSS---------SSSNSNSNSNSNSSSS 168
Query: 260 SSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASSVTLNGESETNCKQNDS 439
S++S + S+++ + SSSN + + S +SS N S ++ ++ S
Sbjct: 169 SNSSSNSNSNSSSSSNSSSNSNSSSNSSSSSNSSSNSSRSSSSSSNSNSNSSSSSSRSSS 228
Query: 440 LXS 448
S
Sbjct: 229 SSS 231
>SB_14763| Best HMM Match : Zona_pellucida (HMM E-Value=0)
Length = 689
Score = 30.7 bits (66), Expect = 0.71
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +2
Query: 80 SVQNDTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHX 259
S+ N S+ + SN++ S S +++ N + + NS++ S N S+ +
Sbjct: 558 SISNSNSNSNSN-SNSNSNSNNNSNSNSNNNSNNNNNNNSNSNSNSNSNSNSNNNSNSNS 616
Query: 260 SSASLATTKQRSTATL 307
+S ATT +TAT+
Sbjct: 617 NSTVTATTTTTATATV 632
>SB_12715| Best HMM Match : Adeno_E1A (HMM E-Value=1.3)
Length = 909
Score = 30.7 bits (66), Expect = 0.71
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +2
Query: 290 RSTATLDKDVAASSSNIDLYHYLRAPENASVASSVTLNGESETNCKQND 436
+ T T DK + SN+ L R +N SV SSVTL +S C + D
Sbjct: 197 KKTRTDDK---SGPSNVTLLSQSRHEDNESVPSSVTLLNQSRNECGEID 242
>SB_24814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 30.3 bits (65), Expect = 0.94
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 83 VQNDTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNE 226
V + +R SHR R S ++ S L D+ +++NK SS E
Sbjct: 635 VNSSVKRRPSHRKRQGSEKVHRVGSVLSDYTKPKVIRRNKEGVTSSEE 682
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 30.3 bits (65), Expect = 0.94
Identities = 25/101 (24%), Positives = 43/101 (42%)
Frame = +2
Query: 131 SNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHXSSASLATTKQRSTATLD 310
SN++ S S ++ N N + NS++ S + S+ + +S T +TAT
Sbjct: 492 SNSNSNSNSNSNSNSNSNSDSNNNSNSNSNSNSNSNSNSNSNSNSTVTVTVTATATATAT 551
Query: 311 KDVAASSSNIDLYHYLRAPENASVASSVTLNGESETNCKQN 433
V SSS+ + N++ S+ N S +N N
Sbjct: 552 VTVHNSSSSSS-----NSNSNSNSNSNSNSNSNSNSNSNSN 587
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 29.5 bits (63), Expect = 1.6
Identities = 29/128 (22%), Positives = 53/128 (41%), Gaps = 8/128 (6%)
Frame = +2
Query: 56 PNTRRRRFSVQNDTQR-PKSHRARGASN-------NSYKSKSALPDHAGENCVQKNKTRP 211
PN+R R S + QR P +R R S+ +SY K PD + E + ++
Sbjct: 115 PNSRVDRGSTRYSAQRGPGYNRDRDVSHKRPLPKPDSYNEKVQSPDRSSEGGSDSSHSQS 174
Query: 212 NSSNEICSLNVSDDHXSSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASS 391
+SS+ S + S +S + ++T+ L ++ S+ + + P S
Sbjct: 175 DSSSSSSSSDGESGSDSDSSTTSKTTKTTSALCVQSLSTRSSDEKFEGSDFPPRHRGGGS 234
Query: 392 VTLNGESE 415
++ E E
Sbjct: 235 ISNYSEDE 242
>SB_19088| Best HMM Match : PSGP (HMM E-Value=2.5)
Length = 737
Score = 29.5 bits (63), Expect = 1.6
Identities = 23/78 (29%), Positives = 39/78 (50%)
Frame = +2
Query: 209 PNSSNEICSLNVSDDHXSSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVAS 388
P+ S I N + + + T S++T++ V +++S+I+ + ASVAS
Sbjct: 64 PSISTSILPYNTTVIATPNTTRLVTSTISSSTVNVSVISTTSSIE------STIMASVAS 117
Query: 389 SVTLNGESETNCKQNDSL 442
S+ LN S T ND+L
Sbjct: 118 SIQLNITSNTTMAVNDTL 135
Score = 28.7 bits (61), Expect = 2.9
Identities = 22/78 (28%), Positives = 39/78 (50%)
Frame = +2
Query: 209 PNSSNEICSLNVSDDHXSSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVAS 388
P+ S I N + + + T S++T++ +++S+I+ + ASVAS
Sbjct: 265 PSISTSILPYNTTVIATPNTTRLVTSTISSSTVNVSAISTTSSIE------STIMASVAS 318
Query: 389 SVTLNGESETNCKQNDSL 442
S+ LN S T + ND+L
Sbjct: 319 SIQLNITSNTTVEVNDTL 336
Score = 27.9 bits (59), Expect = 5.0
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +2
Query: 209 PNSSNEICSLNVSDDHXSSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVAS 388
P+ S I N + + + T S++T++ +++S+I+ + ASVAS
Sbjct: 466 PSISTSILPYNTTVIATPNTTRLVTSTISSSTVNVSAISTTSSIE------STIMASVAS 519
Query: 389 SVTLNGESETNCKQNDSL 442
S+ LN S T ND+L
Sbjct: 520 SIQLNITSNTTMAVNDTL 537
>SB_23760| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 29.1 bits (62), Expect = 2.2
Identities = 24/119 (20%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Frame = +2
Query: 110 SHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHXSSASLATTKQ 289
S A A +S + S + A + + + S++ S N++ +S++ A++ +
Sbjct: 23 SANASSAKTSSASASSNIASSASASSASMSSSSSLSAS--ASSNIASSDIASSANASSAK 80
Query: 290 RSTATLDKDVA----ASSSNIDLYHYLRAPENASVASSVTLNGESETNCKQNDSLXSQH 454
S+A+ ++A ASS+++ L A ++++ASS + + ++ K + + S +
Sbjct: 81 TSSASASSNIASSASASSASMSSASSLSASASSNIASSDIASSANASSAKTSSASASSN 139
>SB_18084| Best HMM Match : DUF801 (HMM E-Value=0.37)
Length = 599
Score = 28.7 bits (61), Expect = 2.9
Identities = 19/84 (22%), Positives = 42/84 (50%)
Frame = +2
Query: 203 TRPNSSNEICSLNVSDDHXSSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASV 382
++ SN C +N S S++SL + + A+ +ASS+++ L A ++++
Sbjct: 315 SKAGPSNCSCDMNASPSALSASSLPASASSAIAS---SASASSASMSSASSLSASASSNI 371
Query: 383 ASSVTLNGESETNCKQNDSLXSQH 454
ASS + + ++ K + + S +
Sbjct: 372 ASSDIASSANASSAKTSSASASSN 395
>SB_13424| Best HMM Match : Pox_A32 (HMM E-Value=0.073)
Length = 1387
Score = 28.7 bits (61), Expect = 2.9
Identities = 21/79 (26%), Positives = 32/79 (40%)
Frame = +3
Query: 15 LINKKNKYKFRVKCRTRGDADSPCKMIHNDRSLTERGAPPITATNRSPRSPTMXEKIVYK 194
L+N ++ +K RG +SP H RS + P A P S + +V
Sbjct: 1081 LVNTRDGVHLEIKRTARGSGNSPYNTEHIRRSGMDPENVPFNALIVGPTSCGKTQFVV-D 1139
Query: 195 RTRHVLTVPMRFVL*MCPT 251
R R +++ MCPT
Sbjct: 1140 RLRGPFRGKFDYIVLMCPT 1158
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 28.7 bits (61), Expect = 2.9
Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 1/104 (0%)
Frame = +2
Query: 131 SNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHXSSASLATTKQRSTATLD 310
S+NSY S + +N N N+ N + N + D+ +S + T S +
Sbjct: 230 SDNSYTDNSTSDNSKKDN---SNPNNSNTDNSSSADNSNPDNSNSDNSNTDNSNSDNSSS 286
Query: 311 KDVAASSSNIDLYHYLRA-PENASVASSVTLNGESETNCKQNDS 439
+ + +SN D + PEN S + + N ++ N +DS
Sbjct: 287 DNSNSDNSNTDNSTSNNSNPEN-STSDNSNSNNSNQDNSNSDDS 329
>SB_15137| Best HMM Match : SRCR (HMM E-Value=4.9e-28)
Length = 327
Score = 28.3 bits (60), Expect = 3.8
Identities = 18/97 (18%), Positives = 41/97 (42%)
Frame = +2
Query: 47 CEMPNTRRRRFSVQNDTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNE 226
CE+ + N+ S+ + +NNS + + + + N + NS+N
Sbjct: 112 CEIGMQSNNNNNSNNNNSTSNSNSSTRNNNNSTSNSNNSTRNNNNSTSNSNNSTSNSNNS 171
Query: 227 ICSLNVSDDHXSSASLATTKQRSTATLDKDVAASSSN 337
+ N S ++ +S S + ++ ++ +SS+N
Sbjct: 172 TSNSNNSSNNNNSTSNSNNSTSNSNNSTRNNNSSSNN 208
>SB_10387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 597
Score = 28.3 bits (60), Expect = 3.8
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +2
Query: 320 AASSSNIDLYH-YLRAPENASVASSVTLNGESETNCKQN-DSLXSQHRIKVRSPK 478
A +SN++ Y Y P N+ + TLN + TN QN S HR+ S K
Sbjct: 370 AMFTSNVNNYRSYSVKPSNSMRSQHETLNKSAATNANQNCQRFNSSHRMSDGSNK 424
>SB_10056| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=7.7e-05)
Length = 1960
Score = 28.3 bits (60), Expect = 3.8
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +2
Query: 209 PNSSNEICSLNVSDDHXSSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVAS 388
P+ S I N + + + T S++T++ +++S+I+ + ASVAS
Sbjct: 958 PSISTSILPYNTTVIATPNTTRLVTSMISSSTVNVSAISTTSSIE------STIMASVAS 1011
Query: 389 SVTLNGESETNCKQNDSL 442
S+ LN S T ND+L
Sbjct: 1012 SIQLNITSNTTMAVNDTL 1029
Score = 27.9 bits (59), Expect = 5.0
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +2
Query: 209 PNSSNEICSLNVSDDHXSSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVAS 388
P+ S I N + + + T S++T++ +++S+I+ + ASVAS
Sbjct: 154 PSISTSILPYNTTVIATPNTTRLVTSTISSSTVNVSAISTTSSIE------STIMASVAS 207
Query: 389 SVTLNGESETNCKQNDSL 442
S+ LN S T ND+L
Sbjct: 208 SIQLNITSNTTMAVNDTL 225
Score = 27.9 bits (59), Expect = 5.0
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +2
Query: 209 PNSSNEICSLNVSDDHXSSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVAS 388
P+ S I N + + + T S++T++ +++S+I+ + ASVAS
Sbjct: 757 PSISTSILPYNTTVIATPNTTRLATSTISSSTVNVSAISTTSSIE------STIMASVAS 810
Query: 389 SVTLNGESETNCKQNDSL 442
S+ LN S T ND+L
Sbjct: 811 SIQLNITSNTTMAVNDTL 828
Score = 27.9 bits (59), Expect = 5.0
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +2
Query: 209 PNSSNEICSLNVSDDHXSSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVAS 388
P+ S I N + + + T S++T++ +++S+I+ + ASVAS
Sbjct: 1360 PSISTSILPYNTTVIATPNTTRLVTSTISSSTVNVSAISTTSSIE------STIMASVAS 1413
Query: 389 SVTLNGESETNCKQNDSL 442
S+ LN S T ND+L
Sbjct: 1414 SIQLNITSNTTMAVNDTL 1431
Score = 27.5 bits (58), Expect = 6.6
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 281 TKQRSTATLDKDVAASSSNIDLYHYLRAPEN---ASVASSVTLNGESETNCKQNDSL 442
T +T + +++S+ N+ + E+ ASVASS+ LN S T ND+L
Sbjct: 1576 TTPNTTRLVTSTISSSTVNVSAISTTSSIESTIMASVASSIQLNITSNTTMAVNDTL 1632
Score = 27.1 bits (57), Expect = 8.8
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +2
Query: 215 SSNEICSLNVSDDHXSSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPEN---ASVA 385
S+ I S++ S ++ +AT AT +++S+ N+ + E+ ASVA
Sbjct: 1154 STTLIPSISTSMLPYNTTVIATPNTTRLAT--STISSSTVNVSAISTTSSIESTIMASVA 1211
Query: 386 SSVTLNGESETNCKQNDSL 442
SS+ LN S T ND+L
Sbjct: 1212 SSIQLNITSNTTMAVNDTL 1230
>SB_35264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 86 QNDTQRPKSHRARGASNNSYKSKSALPDHAGENCVQKNKTRPNSSNE 226
+N +Q + H RG+ +S + LP GE+ +K+ P + E
Sbjct: 138 RNRSQYQRLHSYRGSRTSSRHRELCLPSKGGESRPDHDKSHPTNGGE 184
>SB_34931| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.46)
Length = 572
Score = 28.3 bits (60), Expect = 3.8
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +2
Query: 209 PNSSNEICSLNVSDDHXSSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVAS 388
P+ S I N + + + T S++T++ +++S+I+ + ASVAS
Sbjct: 137 PSISTSILPYNTTVIATPNTTRMVTSSISSSTVNVSAISTTSSIE------STIMASVAS 190
Query: 389 SVTLNGESETNCKQNDSL 442
S+ LN S T ND+L
Sbjct: 191 SIQLNITSNTTMAVNDTL 208
>SB_55826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1199
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = +3
Query: 27 KNKYKFRVKCRTRGDADSPCKMIHNDRSLTERGAPPITATNRSPRSPTMXEKI 185
K K K + K ++ ADSP + + +S G PP T P E +
Sbjct: 570 KRKKKKKCKSKSPTKADSPQRPLRRSKSSKRIGRPPKTNKKSQPLDSDSEENV 622
>SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1229
Score = 27.9 bits (59), Expect = 5.0
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +2
Query: 209 PNSSNEICSLNVSDDHXSSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVAS 388
P+ S I N + + + T S++T++ +++S+I+ + ASVAS
Sbjct: 154 PSISTSILPYNTTVIATPNTTRLVTSTISSSTVNVSAISTTSSIE------STIMASVAS 207
Query: 389 SVTLNGESETNCKQNDSL 442
S+ LN S T ND+L
Sbjct: 208 SIQLNITSNTTMAVNDTL 225
Score = 27.9 bits (59), Expect = 5.0
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +2
Query: 209 PNSSNEICSLNVSDDHXSSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVAS 388
P+ S I N + + + T S++T++ +++S+I+ + ASVAS
Sbjct: 355 PSISTSILPYNTTVIATPNTTRLVTSTISSSTVNVSAISTTSSIE------STIMASVAS 408
Query: 389 SVTLNGESETNCKQNDSL 442
S+ LN S T ND+L
Sbjct: 409 SIQLNITSNTTMAVNDTL 426
>SB_50209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 27.5 bits (58), Expect = 6.6
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +2
Query: 128 ASNNSYKSKSALPDHAGE---NCVQKNKTRPNSSNEICSLNVSDDHXSSASLATTKQRST 298
++NN +KS DH E N N NS+N + N +D + S+ + S
Sbjct: 274 SNNNHGNNKSNSNDHNNENNNNNSNNNDNNSNSNNNDNNSNNNDFNNSNRNDHNVDNNSH 333
Query: 299 ATLDKDVAASSSNIDLYHYLRAPENASVASSVTLNGESETNCKQNDS 439
+K+ + S+ N D + + S S + +S +N +N+S
Sbjct: 334 NNDEKNKSNSNDNNDENNNNNSNNKDSNNKSNNNDNKSNSNNTENNS 380
Score = 27.1 bits (57), Expect = 8.8
Identities = 26/126 (20%), Positives = 52/126 (41%), Gaps = 3/126 (2%)
Frame = +2
Query: 59 NTRRRRFSVQNDTQRPKSHRARGASNNSYKSKSALP---DHAGENCVQKNKTRPNSSNEI 229
N S ND ++ ++NN + + + D+ N +KNK+ N +N+
Sbjct: 290 NENNNNNSNNNDNNSNSNNNDNNSNNNDFNNSNRNDHNVDNNSHNNDEKNKSNSNDNNDE 349
Query: 230 CSLNVSDDHXSSASLATTKQRSTATLDKDVAASSSNIDLYHYLRAPENASVASSVTLNGE 409
+ N S++ S+ +S + + +S+N + +R NA S+ N +
Sbjct: 350 NNNNNSNNKDSNNKSNNNDNKSNS---NNTENNSNNDGFDNSIRNDNNAGNKSN---NKD 403
Query: 410 SETNCK 427
+ N K
Sbjct: 404 EKNNSK 409
>SB_34373| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 538
Score = 27.5 bits (58), Expect = 6.6
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +2
Query: 80 SVQNDTQRPKSHRARGASNNSYKSKSA 160
S++ND Q+ +SH++ G S++S + K A
Sbjct: 368 SLKNDIQKRRSHQSEGDSHSSPRLKGA 394
>SB_22002| Best HMM Match : zf-C2H2 (HMM E-Value=1.7e-25)
Length = 431
Score = 27.5 bits (58), Expect = 6.6
Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 1/111 (0%)
Frame = +2
Query: 128 ASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHXSSASLATTK-QRSTAT 304
+SN KS++ + Q + + P +LN+ S+++ Q T+
Sbjct: 186 SSNPLIKSQATIAQRPSSQ-PQTSSSGPMFMEATATLNMKWPILGSSNVYQNNLQSDTSV 244
Query: 305 LDKDVAASSSNIDLYHYLRAPENASVASSVTLNGESETNCKQNDSLXSQHR 457
LDK SS N+D AP S G + K+++ S+ R
Sbjct: 245 LDKLFLQSSGNMDFLSTPTAPSKPSQRGRPAKGGSAILKAKRSNPTDSRSR 295
>SB_386| Best HMM Match : zf-C2H2 (HMM E-Value=1.7e-25)
Length = 669
Score = 27.5 bits (58), Expect = 6.6
Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 1/111 (0%)
Frame = +2
Query: 128 ASNNSYKSKSALPDHAGENCVQKNKTRPNSSNEICSLNVSDDHXSSASLATTK-QRSTAT 304
+SN KS++ + Q + + P +LN+ S+++ Q T+
Sbjct: 424 SSNPLIKSQATIAQRPSSQ-PQTSSSGPMFMEATATLNMKWPILGSSNVYQNNLQSDTSV 482
Query: 305 LDKDVAASSSNIDLYHYLRAPENASVASSVTLNGESETNCKQNDSLXSQHR 457
LDK SS N+D AP S G + K+++ S+ R
Sbjct: 483 LDKLFLQSSGNMDFLSTPTAPSKPSQRGRPAKGGSAILKAKRSNPTDSRSR 533
>SB_31502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 282
Score = 27.5 bits (58), Expect = 6.6
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Frame = +2
Query: 161 LPDHAGENCVQKNKTRPNSSNEICSLN-------VSDDHXSSAS 271
LPD +N +++ + RP S ++C VSD H SAS
Sbjct: 36 LPDIESDNLIKRYQRRPKKSEKLCLAEFAAWFNCVSDKHADSAS 79
>SB_4617| Best HMM Match : Extensin_2 (HMM E-Value=0.38)
Length = 450
Score = 27.5 bits (58), Expect = 6.6
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 131 SNNSYKSKSALPDHAGENCVQKNKTRPNSSNEI--CSLNVSDDHXSSASLATTKQRST 298
SNN+ S S+ + NC N N+ N C+ N + ++ ++A+ ATT +T
Sbjct: 29 SNNNNNSSSSSSNCNNSNCNNSNCNNINNCNNSNNCNNNNNCNNTTAATTATTTTAAT 86
>SB_38413| Best HMM Match : Peptidase_C5 (HMM E-Value=0.26)
Length = 171
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 224 HWNC*DVSCSFVHNFLXHGRG 162
+WN V CSFVH+ + HG G
Sbjct: 138 NWND-QVVCSFVHDLVCHGAG 157
>SB_5102| Best HMM Match : Peptidase_C5 (HMM E-Value=0.34)
Length = 180
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 224 HWNC*DVSCSFVHNFLXHGRG 162
+WN V CSFVH+ + HG G
Sbjct: 147 NWND-QVVCSFVHDLVCHGAG 166
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,354,176
Number of Sequences: 59808
Number of extensions: 313426
Number of successful extensions: 1183
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1169
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1099461690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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