Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15o07
(631 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39644-2|AAA80360.2| 966|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z73906-12|CAE17767.1| 170|Caenorhabditis elegans Hypothetical p... 29 3.6
U56966-2|AAA98718.1| 755|Caenorhabditis elegans Unidentified vi... 29 3.6
AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical ... 29 3.6
Z48009-9|CAA88085.1| 329|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z14092-10|CAA78472.2| 1020|Caenorhabditis elegans Hypothetical p... 28 6.3
AF324489-1|AAK49910.1| 351|Caenorhabditis elegans F44C8.7-like ... 28 6.3
AF016438-4|AAB65894.2| 351|Caenorhabditis elegans Hypothetical ... 28 6.3
AF003151-20|AAK18920.2| 251|Caenorhabditis elegans Hypothetical... 27 8.4
AC024857-3|AAK31568.6| 611|Caenorhabditis elegans Hypothetical ... 27 8.4
AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical ... 27 8.4
>U39644-2|AAA80360.2| 966|Caenorhabditis elegans Hypothetical
protein T10E10.4 protein.
Length = 966
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -2
Query: 609 TCLSNFFTTGTVTGKLSANFSGVHSSGCVVAKCLICSFSLQVNKLGIFC 463
+C S F TGK F V+S C + +C S+Q +GI C
Sbjct: 578 SCPSGGFAISMCTGKCGTGFECVNSGCCSLPRCPSGLMSVQRCAMGIGC 626
>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical protein
ZC116.3 protein.
Length = 3871
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +2
Query: 305 DGFKVDDED-AEEYVEQSESDFYKVGEVYNEHLNETLMGKYEQRHQIIKEKYFKQNMPNL 481
D KVDD D AE V ++D Y + N++ ++ + RH +K Y Q P
Sbjct: 1377 DMLKVDDTDLAEAEVTFKKTD-YNITNSVNKYCDKAIPRVIRSRHNSMKLTYSSQGDPTN 1435
Query: 482 LTW 490
W
Sbjct: 1436 QFW 1438
>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical protein
ZC116.3 protein.
Length = 3871
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +2
Query: 305 DGFKVDDED-AEEYVEQSESDFYKVGEVYNEHLNETLMGKYEQRHQIIKEKYFKQNMPNL 481
D KVDD D AE V ++D Y + N++ ++ + RH +K Y Q P
Sbjct: 1377 DMLKVDDTDLAEAEVTFKKTD-YNITNSVNKYCDKAIPRVIRSRHNSMKLTYSSQGDPTN 1435
Query: 482 LTW 490
W
Sbjct: 1436 QFW 1438
>Z73906-12|CAE17767.1| 170|Caenorhabditis elegans Hypothetical
protein D2030.12 protein.
Length = 170
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = -1
Query: 388 VNLTNFIKITL*LFDILFSIFVVNFKAVSFECRNSLVQTWIWS 260
++L+++IK+ L + IL + ++ A C + WI S
Sbjct: 47 ISLSSYIKVVLVILSILLILLIIRLSAFGIRCLVFKARDWIHS 89
>U56966-2|AAA98718.1| 755|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 3 protein.
Length = 755
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +2
Query: 326 EDAEEYVEQSESDFYKVGEVYNEHL----NETLMGKYEQRHQIIKEKYF 460
ED E +SDF K ++ EH N E R QI++EK F
Sbjct: 448 EDLTNRAEDFQSDFVKTMDIIKEHHVAYGNSNARNMLEVREQILQEKGF 496
>AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical
protein K10B4.1 protein.
Length = 1210
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/42 (23%), Positives = 23/42 (54%)
Frame = +2
Query: 359 SDFYKVGEVYNEHLNETLMGKYEQRHQIIKEKYFKQNMPNLL 484
SDF + ++Y+ E ++G +HQ++ +++ + N L
Sbjct: 1011 SDFLNMSKIYDNEAVEQILGGMHGKHQMMTDRFVDDAIRNFL 1052
>Z48009-9|CAA88085.1| 329|Caenorhabditis elegans Hypothetical
protein AH6.12 protein.
Length = 329
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 127 YIIFHDICVEFT*KQNNESKIAVCFLNILSV*SMFLFDRNQS 2
Y + IC F +Q ES +CFLN MF++ S
Sbjct: 216 YQVRFKICARFHKRQVIESTETICFLNFTQFVFMFIYSSGNS 257
>Z14092-10|CAA78472.2| 1020|Caenorhabditis elegans Hypothetical
protein R107.6 protein.
Length = 1020
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 392 EHLNETLMGKYEQRHQIIKEKYFKQNMPNLLTWSEKEQIRHLAT 523
E+LNE L+GKY +R K K + + +W ++ L T
Sbjct: 602 EYLNE-LLGKYMERGSSFNTKEMKATILKMFSWMADQRNEQLIT 644
>AF324489-1|AAK49910.1| 351|Caenorhabditis elegans F44C8.7-like
protein protein.
Length = 351
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = -1
Query: 406 FIQMFVVNLTNFIKIT----L*LFDILFSIFVVNFKAVSFECRNSLVQTWIWSE*V*PLS 239
F+QM N ++F+ T + + +LF + +V FK SFE + IW V L
Sbjct: 49 FVQM--ANTSHFLPTTSVFMMEVLKLLFCLIIVLFKTKSFEKTGKKLYEHIWKNRVETLK 106
Query: 238 VS 233
VS
Sbjct: 107 VS 108
>AF016438-4|AAB65894.2| 351|Caenorhabditis elegans Hypothetical
protein F44C8.7 protein.
Length = 351
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = -1
Query: 406 FIQMFVVNLTNFIKIT----L*LFDILFSIFVVNFKAVSFECRNSLVQTWIWSE*V*PLS 239
F+QM N ++F+ T + + +LF + +V FK SFE + IW V L
Sbjct: 49 FVQM--ANTSHFLPTTSVFMMEVLKLLFCLIIVLFKTKSFEKTGKKLYEHIWKNRVETLK 106
Query: 238 VS 233
VS
Sbjct: 107 VS 108
>AF003151-20|AAK18920.2| 251|Caenorhabditis elegans Hypothetical
protein D1007.16 protein.
Length = 251
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 279 TRELRHSNETALKLTTKMLKSMSNNQR 359
TR+L E ALK + L++ SNNQR
Sbjct: 113 TRDLDQGTELALKRGIERLRTSSNNQR 139
>AC024857-3|AAK31568.6| 611|Caenorhabditis elegans Hypothetical
protein Y71G12A.2 protein.
Length = 611
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = +3
Query: 96 NSTHISWNIIYRTMNYSY*LSSQKKKCSPLAYGICVQALKLLSVTFET 239
N WNI Y+ NY L S KC I Q LK L + T
Sbjct: 508 NRHRFVWNITYKLFNY---LRSSNSKCPLQKLSINRQMLKTLPIQAST 552
>AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical
protein F55A3.1 protein.
Length = 958
Score = 27.5 bits (58), Expect = 8.4
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Frame = +2
Query: 320 DDEDAEEYVEQSESDFYK--VGEVYNE---HLNETLMGKYEQRHQIIKEKY-FKQNMPNL 481
DDED EE E SES + + V E E ++ + E+R I++ ++ F+ MPNL
Sbjct: 254 DDEDDEEEEEDSESGYEEDPVPEFREEGEAYVARRRVPFEERRRDILEARHGFRPQMPNL 313
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,729,294
Number of Sequences: 27780
Number of extensions: 281830
Number of successful extensions: 861
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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