Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15o07
         (631 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    21   7.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   7.5  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    21   7.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   7.5  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.9  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   9.9  

>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
          protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 74 IQNCRLFS*YIKCLI 30
          +QN R+ + YIKC++
Sbjct: 34 LQNGRILTNYIKCML 48


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 72  DSLFCFQVNSTHISWN 119
           D   C+Q+   HI WN
Sbjct: 497 DKRGCYQLAINHIRWN 512


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
          protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 74 IQNCRLFS*YIKCLI 30
          +QN R+ + YIKC++
Sbjct: 34 LQNGRILTNYIKCML 48


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 72  DSLFCFQVNSTHISWN 119
           D   C+Q+   HI WN
Sbjct: 587 DKRGCYQLAINHIRWN 602


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 152  IIIPEEKMFTARLRHLCPSA 211
            I+   EK F  RLR+  PSA
Sbjct: 1188 ILTWNEKRFWERLRYAIPSA 1207


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/22 (27%), Positives = 12/22 (54%)
 Frame = -3

Query: 419 YPLMFHSNVRCKPHQLYKNHSL 354
           +P  +H +    PH  + NH++
Sbjct: 322 HPSQYHPHRGSSPHHQHGNHTM 343


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,015
Number of Sequences: 438
Number of extensions: 3167
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)