Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15o04
         (616 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X92972-1|CAA63549.1|  305|Homo sapiens protein phosphatase 6 pro...    33   0.61 
BT019708-1|AAV38514.1|  305|Homo sapiens protein phosphatase 6, ...    33   0.61 
BC006990-1|AAH06990.1|  305|Homo sapiens protein phosphatase 6, ...    33   0.61 
AL445930-4|CAI13677.1|  305|Homo sapiens protein phosphatase 6, ...    33   0.61 
AL445930-3|CAI13676.1|  125|Homo sapiens protein phosphatase 6, ...    33   0.61 

>X92972-1|CAA63549.1|  305|Homo sapiens protein phosphatase 6
           protein.
          Length = 305

 Score = 33.5 bits (73), Expect = 0.61
 Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = -3

Query: 260 LCDFGCVQNIASILRQSNVGGWAGPTGRVCAARQRQTSYYDLL*IRNTDRENPDLNY-FL 84
           LCD+ C      +L +SNV   + P   VC     Q  +YDL  +  T  + PD NY F+
Sbjct: 27  LCDYVC----DLLLEESNVQPVSTPV-TVCGDIHGQ--FYDLCELFRTGGQVPDTNYIFM 79

Query: 83  VDMVDLCVYSL 51
            D VD   YSL
Sbjct: 80  GDFVDRGYYSL 90


>BT019708-1|AAV38514.1|  305|Homo sapiens protein phosphatase 6,
           catalytic subunit protein.
          Length = 305

 Score = 33.5 bits (73), Expect = 0.61
 Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = -3

Query: 260 LCDFGCVQNIASILRQSNVGGWAGPTGRVCAARQRQTSYYDLL*IRNTDRENPDLNY-FL 84
           LCD+ C      +L +SNV   + P   VC     Q  +YDL  +  T  + PD NY F+
Sbjct: 27  LCDYVC----DLLLEESNVQPVSTPV-TVCGDIHGQ--FYDLCELFRTGGQVPDTNYIFM 79

Query: 83  VDMVDLCVYSL 51
            D VD   YSL
Sbjct: 80  GDFVDRGYYSL 90


>BC006990-1|AAH06990.1|  305|Homo sapiens protein phosphatase 6,
           catalytic subunit protein.
          Length = 305

 Score = 33.5 bits (73), Expect = 0.61
 Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = -3

Query: 260 LCDFGCVQNIASILRQSNVGGWAGPTGRVCAARQRQTSYYDLL*IRNTDRENPDLNY-FL 84
           LCD+ C      +L +SNV   + P   VC     Q  +YDL  +  T  + PD NY F+
Sbjct: 27  LCDYVC----DLLLEESNVQPVSTPV-TVCGDIHGQ--FYDLCELFRTGGQVPDTNYIFM 79

Query: 83  VDMVDLCVYSL 51
            D VD   YSL
Sbjct: 80  GDFVDRGYYSL 90


>AL445930-4|CAI13677.1|  305|Homo sapiens protein phosphatase 6,
           catalytic subunit protein.
          Length = 305

 Score = 33.5 bits (73), Expect = 0.61
 Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = -3

Query: 260 LCDFGCVQNIASILRQSNVGGWAGPTGRVCAARQRQTSYYDLL*IRNTDRENPDLNY-FL 84
           LCD+ C      +L +SNV   + P   VC     Q  +YDL  +  T  + PD NY F+
Sbjct: 27  LCDYVC----DLLLEESNVQPVSTPV-TVCGDIHGQ--FYDLCELFRTGGQVPDTNYIFM 79

Query: 83  VDMVDLCVYSL 51
            D VD   YSL
Sbjct: 80  GDFVDRGYYSL 90


>AL445930-3|CAI13676.1|  125|Homo sapiens protein phosphatase 6,
           catalytic subunit protein.
          Length = 125

 Score = 33.5 bits (73), Expect = 0.61
 Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = -3

Query: 260 LCDFGCVQNIASILRQSNVGGWAGPTGRVCAARQRQTSYYDLL*IRNTDRENPDLNY-FL 84
           LCD+ C      +L +SNV   + P   VC     Q  +YDL  +  T  + PD NY F+
Sbjct: 15  LCDYVC----DLLLEESNVQPVSTPV-TVCGDIHGQ--FYDLCELFRTGGQVPDTNYIFM 67

Query: 83  VDMVDLCVYSL 51
            D VD   YSL
Sbjct: 68  GDFVDRGYYSL 78


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,216,830
Number of Sequences: 237096
Number of extensions: 1261363
Number of successful extensions: 3961
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3953
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)