Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15n01
(665 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 42 3e-04
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 42 4e-04
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 42 4e-04
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 42 4e-04
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 41 0.001
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 39 0.003
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 39 0.003
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 39 0.003
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 39 0.004
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 39 0.004
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 39 0.004
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 38 0.005
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 38 0.005
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 38 0.005
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 38 0.006
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 38 0.006
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 38 0.006
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 38 0.006
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 38 0.006
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 38 0.008
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 38 0.008
Z92777-10|CAB07172.2| 304|Caenorhabditis elegans Hypothetical p... 37 0.015
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 37 0.015
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 36 0.026
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 36 0.026
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 36 0.026
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 36 0.026
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 35 0.045
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 35 0.045
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 35 0.045
Z92777-8|CAJ58494.1| 293|Caenorhabditis elegans Hypothetical pr... 35 0.060
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 35 0.060
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 35 0.060
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 35 0.060
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 35 0.060
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 35 0.060
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 35 0.060
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 35 0.060
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 35 0.060
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 35 0.060
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 35 0.060
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 34 0.079
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 34 0.079
U00066-1|AAA50742.1| 490|Caenorhabditis elegans High incidence ... 34 0.10
Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical p... 33 0.18
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 33 0.18
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 33 0.18
Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical pr... 33 0.24
AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical... 33 0.24
AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical... 33 0.24
AF026207-1|AAB71266.1| 522|Caenorhabditis elegans Hypothetical ... 33 0.24
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 32 0.32
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 32 0.32
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 32 0.32
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 32 0.32
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 32 0.32
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 32 0.42
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 32 0.42
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 32 0.42
Z81084-7|CAB03111.1| 312|Caenorhabditis elegans Hypothetical pr... 31 0.56
Z81037-10|CAB02754.1| 312|Caenorhabditis elegans Hypothetical p... 31 0.56
X95609-1|CAA64867.1| 312|Caenorhabditis elegans mec-8 protein. 31 0.56
X95608-1|CAA64866.1| 312|Caenorhabditis elegans mec-8 protein. 31 0.56
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 31 0.56
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 31 0.56
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 31 0.73
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 31 0.73
AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical ... 31 0.73
AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical ... 31 0.73
AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical ... 31 0.73
Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical pr... 31 0.97
Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical pr... 31 0.97
U40160-1|AAA81155.3| 531|Caenorhabditis elegans Hypothetical pr... 31 0.97
L10986-10|AAL08032.1| 111|Caenorhabditis elegans Hypothetical p... 31 0.97
AL117193-9|CAB60302.2| 737|Caenorhabditis elegans Hypothetical ... 31 0.97
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 31 0.97
U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna bi... 30 1.3
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 30 1.7
AF357877-1|AAK27715.1| 835|Caenorhabditis elegans receptor-medi... 29 2.2
AC006695-13|AAF39978.1| 786|Caenorhabditis elegans Receptor med... 29 2.2
AC006695-11|AAF39979.1| 835|Caenorhabditis elegans Receptor med... 29 2.2
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 29 3.0
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 29 3.0
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 29 3.0
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 29 3.0
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 29 3.0
AL021492-14|CAA16388.2| 473|Caenorhabditis elegans Hypothetical... 29 3.0
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical p... 29 3.9
Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical p... 29 3.9
U55854-8|AAK68159.1| 131|Caenorhabditis elegans Hypothetical pr... 29 3.9
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 29 3.9
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 29 3.9
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 3.9
AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical... 29 3.9
Z30973-4|CAA83220.3| 431|Caenorhabditis elegans Hypothetical pr... 28 5.2
AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical ... 28 5.2
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 28 5.2
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 28 5.2
Z83230-2|CAC42304.1| 444|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 28 6.8
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 28 6.8
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 28 6.8
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 28 6.8
L14745-11|AAA27919.2| 315|Caenorhabditis elegans Hypothetical p... 28 6.8
AF026208-2|AAB71269.3| 774|Caenorhabditis elegans Prion-like-(q... 28 6.8
AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical ... 28 6.8
Z68114-10|CAA92157.2| 322|Caenorhabditis elegans Hypothetical p... 27 9.1
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 27 9.1
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 27 9.1
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 27 9.1
U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis def... 27 9.1
U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis def... 27 9.1
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 27 9.1
AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical ... 27 9.1
AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin c-t... 27 9.1
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/134 (23%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Frame = +2
Query: 128 TRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCI 307
T ++V N ++ N++ L F+KFG + S ++ ++K F F+ A+ + E+ +
Sbjct: 213 TNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEG--KSKGFGFVAF-ANPEEAETAV 269
Query: 308 KCFTSEEFKGS--RLYVTRARESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSE 481
+ +G+ +L+V RA++ + ++ Q K E+ Q+++ + + NL E
Sbjct: 270 QALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHK-AERMQKYQGV--NLYVKNLDE 326
Query: 482 KLNP--RKRKFESH 517
++ K++FES+
Sbjct: 327 TVDDDGLKKQFESY 340
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 41.9 bits (94), Expect = 4e-04
Identities = 31/134 (23%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Frame = +2
Query: 128 TRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCI 307
T ++V N ++ N++ L F+KFG + S ++ ++K F F+ A+ + E+ +
Sbjct: 153 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEG--KSKGFGFVAF-ANPEEAETAV 209
Query: 308 KCFTSEEFKGS--RLYVTRARESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSE 481
+ +G+ +L+V RA++ + ++ Q K E+ Q+++ + + NL E
Sbjct: 210 QALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHK-AERMQKYQGV--NLYVKNLDE 266
Query: 482 KLNP--RKRKFESH 517
++ K++FES+
Sbjct: 267 TVDDDGLKKQFESY 280
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 41.9 bits (94), Expect = 4e-04
Identities = 31/134 (23%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Frame = +2
Query: 128 TRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCI 307
T ++V N ++ N++ L F+KFG + S ++ ++K F F+ A+ + E+ +
Sbjct: 150 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEG--KSKGFGFVAF-ANPEEAETAV 206
Query: 308 KCFTSEEFKGS--RLYVTRARESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSE 481
+ +G+ +L+V RA++ + ++ Q K E+ Q+++ + + NL E
Sbjct: 207 QALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHK-AERMQKYQGV--NLYVKNLDE 263
Query: 482 KLNP--RKRKFESH 517
++ K++FES+
Sbjct: 264 TVDDDGLKKQFESY 277
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 41.9 bits (94), Expect = 4e-04
Identities = 31/134 (23%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Frame = +2
Query: 128 TRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCI 307
T ++V N ++ N++ L F+KFG + S ++ ++K F F+ A+ + E+ +
Sbjct: 213 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEG--KSKGFGFVAF-ANPEEAETAV 269
Query: 308 KCFTSEEFKGS--RLYVTRARESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSE 481
+ +G+ +L+V RA++ + ++ Q K E+ Q+++ + + NL E
Sbjct: 270 QALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHK-AERMQKYQGV--NLYVKNLDE 326
Query: 482 KLNP--RKRKFESH 517
++ K++FES+
Sbjct: 327 TVDDDGLKKQFESY 340
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/78 (29%), Positives = 36/78 (46%)
Frame = +2
Query: 134 LFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCIKC 313
++V N P T E+EL FS G++N++ + C + FAFI A + ++
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEF-AEEGSAQRAVEQ 65
Query: 314 FTSEEFKGSRLYVTRARE 367
EF G L V A +
Sbjct: 66 MNGAEFNGRPLRVNLANK 83
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 40.7 bits (91), Expect = 0.001
Identities = 34/113 (30%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Frame = +2
Query: 125 GTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEEN---KTFAFITLSASNYDI 295
G L+V NI E+ N+D LR FS FG + S K ++EN K F F+ +
Sbjct: 342 GVNLYVKNIEEDLNDDGLRDHFSSFGTITS----AKVMVDENGRSKGFGFVCFEKPE-EA 396
Query: 296 ESCIKCFTSEEFKGSRLYVTRARESFLERLQRERNEAQRKET-EKEQQHETIP 451
+ + S+ LYV A+ R Q QR T QQ +P
Sbjct: 397 TAAVTDMNSKMIGAKPLYVALAQRKEDRRAQLASQYMQRLATLRMGQQASGVP 449
Score = 34.3 bits (75), Expect = 0.079
Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +2
Query: 128 TRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCI 307
T +FV N E+ ++++L FSKFG++ S + + + K F F+ + + ++
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVE 296
Query: 308 KCFTS-EEFKGSRLYVTRARESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSEK 484
K S E +L V RA++ ER + + + + E+ Q+++ + + N+ E
Sbjct: 297 KLNDSILEGTDCKLSVCRAQKK-SERSAELKRKYEALKQERVQRYQGV--NLYVKNIEED 353
Query: 485 LN 490
LN
Sbjct: 354 LN 355
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 40.7 bits (91), Expect = 0.001
Identities = 34/113 (30%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Frame = +2
Query: 125 GTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEEN---KTFAFITLSASNYDI 295
G L+V NI E+ N+D LR FS FG + S K ++EN K F F+ +
Sbjct: 342 GVNLYVKNIEEDLNDDGLRDHFSSFGTITS----AKVMVDENGRSKGFGFVCFEKPE-EA 396
Query: 296 ESCIKCFTSEEFKGSRLYVTRARESFLERLQRERNEAQRKET-EKEQQHETIP 451
+ + S+ LYV A+ R Q QR T QQ +P
Sbjct: 397 TAAVTDMNSKMIGAKPLYVALAQRKEDRRAQLASQYMQRLATLRMGQQASGVP 449
Score = 34.3 bits (75), Expect = 0.079
Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +2
Query: 128 TRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCI 307
T +FV N E+ ++++L FSKFG++ S + + + K F F+ + + ++
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVE 296
Query: 308 KCFTS-EEFKGSRLYVTRARESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSEK 484
K S E +L V RA++ ER + + + + E+ Q+++ + + N+ E
Sbjct: 297 KLNDSILEGTDCKLSVCRAQKK-SERSAELKRKYEALKQERVQRYQGV--NLYVKNIEED 353
Query: 485 LN 490
LN
Sbjct: 354 LN 355
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 113 SMSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFI 268
++S +R++V +I ED LR AF FG + S+++ + +KTFAF+
Sbjct: 97 ALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFV 148
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 113 SMSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFI 268
++S +R++V +I ED LR AF FG + S+++ + +KTFAF+
Sbjct: 97 ALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFV 148
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 113 SMSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFI 268
++S +R++V +I ED LR AF FG + S+++ + +KTFAF+
Sbjct: 97 ALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFV 148
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/133 (21%), Positives = 58/133 (43%), Gaps = 2/133 (1%)
Frame = +2
Query: 122 PGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIES 301
P LFV + T +++L FS+FGK+N+ ++ ++ +AFI + +S
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFD----NAKS 294
Query: 302 CIKCFTSEEFKGSRLYV--TRARESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINL 475
C + F FK + + R F + + + + + ++ + P + P +
Sbjct: 295 CEQAF----FKMDNVLIDDRRIHVDFSQSVSQNYKYKPKSQQQEAPKRRQSPQRRPEVKR 350
Query: 476 SEKLNPRKRKFES 514
S + +P R+ S
Sbjct: 351 SHQRSPSPRRRRS 363
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/133 (21%), Positives = 58/133 (43%), Gaps = 2/133 (1%)
Frame = +2
Query: 122 PGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIES 301
P LFV + T +++L FS+FGK+N+ ++ ++ +AFI + +S
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFD----NAKS 294
Query: 302 CIKCFTSEEFKGSRLYV--TRARESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINL 475
C + F FK + + R F + + + + + ++ + P + P +
Sbjct: 295 CEQAF----FKMDNVLIDDRRIHVDFSQSVSQNYKYKPKSQQQEAPKRRQSPQRRPEVKR 350
Query: 476 SEKLNPRKRKFES 514
S + +P R+ S
Sbjct: 351 SHQRSPSPRRRRS 363
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/133 (21%), Positives = 58/133 (43%), Gaps = 2/133 (1%)
Frame = +2
Query: 122 PGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIES 301
P LFV + T +++L FS+FGK+N+ ++ ++ +AFI + +S
Sbjct: 170 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFD----NAKS 225
Query: 302 CIKCFTSEEFKGSRLYV--TRARESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINL 475
C + F FK + + R F + + + + + ++ + P + P +
Sbjct: 226 CEQAF----FKMDNVLIDDRRIHVDFSQSVSQNYKYKPKSQQQEAPKRRQSPQRRPEVKR 281
Query: 476 SEKLNPRKRKFES 514
S + +P R+ S
Sbjct: 282 SHQRSPSPRRRRS 294
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/82 (26%), Positives = 38/82 (46%)
Frame = +2
Query: 119 SPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIE 298
S +++V N+P + E E+ F K+G++ +D+K FAF+ + D E
Sbjct: 6 SEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKS----GRGPAFAFVEFE-DHRDAE 60
Query: 299 SCIKCFTSEEFKGSRLYVTRAR 364
++ EF G R+ V R
Sbjct: 61 DAVRARDGYEFDGRRIRVEFTR 82
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/82 (26%), Positives = 38/82 (46%)
Frame = +2
Query: 119 SPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIE 298
S +++V N+P + E E+ F K+G++ +D+K FAF+ + D E
Sbjct: 6 SEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKS----GRGPAFAFVEFE-DHRDAE 60
Query: 299 SCIKCFTSEEFKGSRLYVTRAR 364
++ EF G R+ V R
Sbjct: 61 DAVRARDGYEFDGRRIRVEFTR 82
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +2
Query: 125 GTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESC 304
G ++V N P T ED+L FS+ G V+++ + C + FAF+ + +
Sbjct: 3 GFSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFT-EEAAAQRA 61
Query: 305 IKCFTSEEFKGSRLYVTRAR 364
+ F +F G L V A+
Sbjct: 62 VDQFNGVDFNGRALRVNLAQ 81
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 38.3 bits (85), Expect = 0.005
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCIK 310
R++VSNIP + E +L F +G+V S+++ ++ +K F F+TL + IESC K
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEI--VTNDRGSKGFGFVTLDS----IESCEK 105
Query: 311 ---CFTSEEFKGSRLYVTRARESFLERLQRERNE 403
+G + V RA + + + +NE
Sbjct: 106 ARAALHESHVQGRIIEVRRATPTRRKLINNPQNE 139
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 38.3 bits (85), Expect = 0.005
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCIK 310
R++VSNIP + E +L F +G+V S+++ ++ +K F F+TL + IESC K
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEI--VTNDRGSKGFGFVTLDS----IESCEK 105
Query: 311 ---CFTSEEFKGSRLYVTRARESFLERLQRERNE 403
+G + V RA + + + +NE
Sbjct: 106 ARAALHESHVQGRIIEVRRATPTRRKLINNPQNE 139
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 134 LFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIES 301
LFV N+P + E E+R F + GKV +D+ K+ I + +AF+ + I++
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI--KTPINTDAAYAFVMFQTVDQAIQA 224
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 134 LFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIES 301
LFV N+P + E E+R F + GKV +D+ K+ I + +AF+ + I++
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI--KTPINTDAAYAFVMFQTVDQAIQA 224
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 134 LFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIES 301
LFV N+P + E E+R F + GKV +D+ K+ I + +AF+ + I++
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI--KTPINTDAAYAFVMFQTVDQAIQA 201
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/99 (24%), Positives = 49/99 (49%)
Frame = +2
Query: 128 TRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCI 307
T + V N+ +E +R F FG++ +DL+ S+ EN+ FA IT ++ +SC
Sbjct: 127 THVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSN-RENRGFATITFRNADDAQKSC- 184
Query: 308 KCFTSEEFKGSRLYVTRARESFLERLQRERNEAQRKETE 424
+ + E G + ++ +ES +++E ++ +
Sbjct: 185 EQLNNFELAGRCIRLSIKQESQAPAVKKEEASIHQRSLD 223
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/99 (24%), Positives = 49/99 (49%)
Frame = +2
Query: 128 TRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCI 307
T + V N+ +E +R F FG++ +DL+ S+ EN+ FA IT ++ +SC
Sbjct: 272 THVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSN-RENRGFATITFRNADDAQKSC- 329
Query: 308 KCFTSEEFKGSRLYVTRARESFLERLQRERNEAQRKETE 424
+ + E G + ++ +ES +++E ++ +
Sbjct: 330 EQLNNFELAGRCIRLSIKQESQAPAVKKEEASIHQRSLD 368
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFI 268
++FV +P + +E +LR F +FGKV+ ++ + + FAFI
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFI 156
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFI 268
++FV +P + +E +LR F +FGKV+ ++ + + FAFI
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFI 156
>Z92777-10|CAB07172.2| 304|Caenorhabditis elegans Hypothetical
protein C17H1.8 protein.
Length = 304
Score = 36.7 bits (81), Expect = 0.015
Identities = 28/94 (29%), Positives = 45/94 (47%)
Frame = +2
Query: 341 RLYVTRARESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSEKLNPRKRKFESHV 520
R+ + ++S L+ +RNE Q E+EQ +I N + + K R E H
Sbjct: 20 RIALANKKKSNNSELENKRNELQ---LEEEQLKRSIQNMEHDMRMQAKEEQRS-DIEKHE 75
Query: 521 VNTYSDTEQQHETIPNQNPIINLSEKLNPRKRKF 622
+ EQ ETI N N ++ +EK + R++KF
Sbjct: 76 LTKREIIEQHQETISNLNRSMSEAEK-SMREQKF 108
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 140 VSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSA 280
V+N+P+ NEDELR F K G+V + + K FAF+T +
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFES 226
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFI 268
RLF+ N+P T ED+L+ F K+G+V+ + + K FA +
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIV 325
Score = 35.1 bits (77), Expect = 0.045
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 128 TRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFI 268
TRL V N+P E +LR F K+G+++ LK + + FAF+
Sbjct: 3 TRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFV 48
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 35.9 bits (79), Expect = 0.026
Identities = 14/60 (23%), Positives = 35/60 (58%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCIK 310
++FV + NT +D +R +S+FG++ + + + + ++ F F+T S ++++ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKT-EVDAAMK 82
Score = 35.1 bits (77), Expect = 0.045
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCI 307
RL+VS + E+ ED L F+K+G V ++ + ++ + F F+T + ++ C+
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFD-DHDSVDQCV 172
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 35.9 bits (79), Expect = 0.026
Identities = 14/60 (23%), Positives = 35/60 (58%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCIK 310
++FV + NT +D +R +S+FG++ + + + + ++ F F+T S ++++ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKT-EVDAAMK 82
Score = 35.1 bits (77), Expect = 0.045
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCI 307
RL+VS + E+ ED L F+K+G V ++ + ++ + F F+T + ++ C+
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFD-DHDSVDQCV 172
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 35.9 bits (79), Expect = 0.026
Identities = 14/60 (23%), Positives = 35/60 (58%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCIK 310
++FV + NT +D +R +S+FG++ + + + + ++ F F+T S ++++ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKT-EVDAAMK 82
Score = 35.1 bits (77), Expect = 0.045
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCI 307
RL+VS + E+ ED L F+K+G V ++ + ++ + F F+T + ++ C+
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFD-DHDSVDQCV 172
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 35.1 bits (77), Expect = 0.045
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCI 307
RL+VS + E+ ED L F+K+G V ++ + ++ + F F+T + ++ C+
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFD-DHDSVDQCV 134
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 35.1 bits (77), Expect = 0.045
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCI 307
RL+VS + E+ ED L F+K+G V ++ + ++ + F F+T + ++ C+
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFD-DHDSVDQCV 134
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 35.1 bits (77), Expect = 0.045
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 128 TRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENK 253
T ++VSNIP + ED+L F FG + +L + S EE +
Sbjct: 200 TNVYVSNIPHSVTEDDLLFTFGSFGPLAALKILYPRSEEERR 241
>Z92777-8|CAJ58494.1| 293|Caenorhabditis elegans Hypothetical
protein C17H1.13 protein.
Length = 293
Score = 34.7 bits (76), Expect = 0.060
Identities = 27/94 (28%), Positives = 45/94 (47%)
Frame = +2
Query: 341 RLYVTRARESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSEKLNPRKRKFESHV 520
R+ + ++S L+ +RNE Q E+EQ I N + + K R E+H
Sbjct: 9 RIALADKKKSNNSELENKRNELQ---LEEEQFRSNIQNMEHSMRMQAKEEQRS-DIENHE 64
Query: 521 VNTYSDTEQQHETIPNQNPIINLSEKLNPRKRKF 622
+ E+ ETI N N ++ +EK + R++KF
Sbjct: 65 LRKREIIEKHQETISNLNRSMSEAEK-SMREQKF 97
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 34.7 bits (76), Expect = 0.060
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFIT 271
++FV IP NE + R F K+G V S ++ S + +K F+T
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVT 102
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/69 (21%), Positives = 35/69 (50%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCIK 310
+LF+ + + NE+ LR F+KFG + + + +++ AF+T + + + + +
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSV-LRDQDGKSRGCAFVTFTNRSCAVVATKE 201
Query: 311 CFTSEEFKG 337
S+ +G
Sbjct: 202 MHHSQTMEG 210
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/66 (24%), Positives = 30/66 (45%)
Frame = +2
Query: 74 TTSLRYFQ*NCKLSMSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENK 253
TTS N + G LF+ ++P++ + +L F+ FG + S + +K
Sbjct: 481 TTSAAQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSK 540
Query: 254 TFAFIT 271
F F++
Sbjct: 541 CFGFVS 546
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 34.7 bits (76), Expect = 0.060
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFIT 271
++FV IP NE + R F K+G V S ++ S + +K F+T
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVT 102
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/69 (21%), Positives = 35/69 (50%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCIK 310
+LF+ + + NE+ LR F+KFG + + + +++ AF+T + + + + +
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSV-LRDQDGKSRGCAFVTFTNRSCAVVATKE 201
Query: 311 CFTSEEFKG 337
S+ +G
Sbjct: 202 MHHSQTMEG 210
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/66 (24%), Positives = 30/66 (45%)
Frame = +2
Query: 74 TTSLRYFQ*NCKLSMSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENK 253
TTS N + G LF+ ++P++ + +L F+ FG + S + +K
Sbjct: 481 TTSAAQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSK 540
Query: 254 TFAFIT 271
F F++
Sbjct: 541 CFGFVS 546
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 34.7 bits (76), Expect = 0.060
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIE-ENKTFAFITLSASN 286
R+FV P +T E ELR F KF V D+K S++ ++K + FIT +
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVK--DVKMVKSLDGQSKGYGFITFETED 117
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 34.7 bits (76), Expect = 0.060
Identities = 29/122 (23%), Positives = 51/122 (41%)
Frame = +2
Query: 101 NCKLSMSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSA 280
N + S P LFV I T+E +LR F +GK+ L + + + +AFI S
Sbjct: 95 NPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTM-VHDEAGKPRGYAFIEYS- 152
Query: 281 SNYDIESCIKCFTSEEFKGSRLYVTRARESFLERLQRERNEAQRKETEKEQQHETIPNQN 460
++ + K + G RL V R + R + +T K ++ +++ +
Sbjct: 153 DKAEMHTAYKKADGIKVDGKRLVVDYERGRTQKTWLPRRLGGGKGDTRKTREAKSVIEER 212
Query: 461 PI 466
I
Sbjct: 213 EI 214
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 34.7 bits (76), Expect = 0.060
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFIT 271
++FV IP NE + R F K+G V S ++ S + +K F+T
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVT 102
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/69 (21%), Positives = 35/69 (50%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCIK 310
+LF+ + + NE+ LR F+KFG + + + +++ AF+T + + + + +
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSV-LRDQDGKSRGCAFVTFTNRSCAVVATKE 201
Query: 311 CFTSEEFKG 337
S+ +G
Sbjct: 202 MHHSQTMEG 210
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/66 (24%), Positives = 30/66 (45%)
Frame = +2
Query: 74 TTSLRYFQ*NCKLSMSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENK 253
TTS N + G LF+ ++P++ + +L F+ FG + S + +K
Sbjct: 410 TTSAAQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSK 469
Query: 254 TFAFIT 271
F F++
Sbjct: 470 CFGFVS 475
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 34.7 bits (76), Expect = 0.060
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFIT 271
++FV IP NE + R F K+G V S ++ S + +K F+T
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVT 102
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/101 (20%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCIK 310
+LF+ + + NE+ LR F+KFG + + + +++ AF+T + + + + +
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSV-LRDQDGKSRGCAFVTFTNRSCAVVATKE 201
Query: 311 CFTSE--EFKGSRLYVTRARESFLERLQRERNEAQRKETEK 427
S+ E G + Y +A S L + ++ + Q+ + ++
Sbjct: 202 MHHSQTMELGGGQNY--QAVASLLSLINGQQGQQQQHQQQQ 240
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 34.7 bits (76), Expect = 0.060
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFIT 271
++FV IP NE + R F K+G V S ++ S + +K F+T
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVT 102
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/69 (21%), Positives = 35/69 (50%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCIK 310
+LF+ + + NE+ LR F+KFG + + + +++ AF+T + + + + +
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSV-LRDQDGKSRGCAFVTFTNRSCAVVATKE 201
Query: 311 CFTSEEFKG 337
S+ +G
Sbjct: 202 MHHSQTMEG 210
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 34.7 bits (76), Expect = 0.060
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFIT 271
++FV IP NE + R F K+G V S ++ S + +K F+T
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVT 102
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKV 208
+LF+ + + NE+ LR F+KFG +
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHI 168
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 34.7 bits (76), Expect = 0.060
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFIT 271
++FV IP NE + R F K+G V S ++ S + +K F+T
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVT 102
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/69 (21%), Positives = 35/69 (50%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCIK 310
+LF+ + + NE+ LR F+KFG + + + +++ AF+T + + + + +
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSV-LRDQDGKSRGCAFVTFTNRSCAVVATKE 201
Query: 311 CFTSEEFKG 337
S+ +G
Sbjct: 202 MHHSQTMEG 210
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/66 (24%), Positives = 30/66 (45%)
Frame = +2
Query: 74 TTSLRYFQ*NCKLSMSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENK 253
TTS N + G LF+ ++P++ + +L F+ FG + S + +K
Sbjct: 481 TTSAAQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSK 540
Query: 254 TFAFIT 271
F F++
Sbjct: 541 CFGFVS 546
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 34.7 bits (76), Expect = 0.060
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIE-ENKTFAFITLSASN 286
R+FV P +T E ELR F KF V D+K S++ ++K + FIT +
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVK--DVKMVKSLDGQSKGYGFITFETED 118
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 34.3 bits (75), Expect = 0.079
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFIT 271
+LFV IP N E +LR F +FGK+ + +K AF+T
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLT 76
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSL 217
+LF+ + + +EDE+R F+ FG+++ +
Sbjct: 125 KLFIGMLSKQQSEDEVRALFATFGELDEV 153
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 34.3 bits (75), Expect = 0.079
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFIT 271
+LFV IP N E +LR F +FGK+ + +K AF+T
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLT 76
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSL 217
+LF+ + + +EDE+R F+ FG+++ +
Sbjct: 125 KLFIGMLSKQQSEDEVRALFATFGELDEV 153
>U00066-1|AAA50742.1| 490|Caenorhabditis elegans High incidence of
males (increasedx chromosome loss) protein 10 protein.
Length = 490
Score = 33.9 bits (74), Expect = 0.10
Identities = 23/84 (27%), Positives = 40/84 (47%)
Frame = +2
Query: 320 SEEFKGSRLYVTRARESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSEKLNPRK 499
SEEF + + + RE LE +++ + ++ K +HE I Q+ N +L
Sbjct: 141 SEEFSDRKFEMEKIREELLEAEKKKNDLLAKQSIRKRHEHELINEQS---NAKAEL---- 193
Query: 500 RKFESHVVNTYSDTEQQHETIPNQ 571
+VVN Y++T Q +E + Q
Sbjct: 194 ----KNVVNEYTETRQINEELDKQ 213
>Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 33.1 bits (72), Expect = 0.18
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +2
Query: 371 FLERLQRERNEAQRKETEKEQQHETIPN-QNPIINLSEKL-NPRKRKFESHVVNTYSDTE 544
F E+++ ++K +EK+ TI N +N + L EK N K + V N Y D
Sbjct: 343 FEEKIRECEQSIRKKTSEKKYMERTIVNAKNEVRILLEKQGNQDLTKRLTKVENDYKDIS 402
Query: 545 QQHETIPNQNPIINLSEKLN 604
QQ E + L EKL+
Sbjct: 403 QQRENMELGGESAKLREKLD 422
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +2
Query: 122 PGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFI 268
P L V N+ T E +LR F +FG++N DL ++ F FI
Sbjct: 74 PSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFI 122
>Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 33.1 bits (72), Expect = 0.18
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +2
Query: 371 FLERLQRERNEAQRKETEKEQQHETIPN-QNPIINLSEKL-NPRKRKFESHVVNTYSDTE 544
F E+++ ++K +EK+ TI N +N + L EK N K + V N Y D
Sbjct: 343 FEEKIRECEQSIRKKTSEKKYMERTIVNAKNEVRILLEKQGNQDLTKRLTKVENDYKDIS 402
Query: 545 QQHETIPNQNPIINLSEKLN 604
QQ E + L EKL+
Sbjct: 403 QQRENMELGGESAKLREKLD 422
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITL 274
RL VSNIP + +L+ F KFG V+ D++ + +K F F+T+
Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVS--DVEIIFNERGSKGFGFVTM 199
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITL 274
RL VSNIP + +L+ F KFG V+ D++ + +K F F+T+
Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVS--DVEIIFNERGSKGFGFVTM 199
>Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 32.7 bits (71), Expect = 0.24
Identities = 22/97 (22%), Positives = 46/97 (47%)
Frame = +2
Query: 371 FLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSEKLNPRKRKFESHVVNTYSDTEQQ 550
+LE++++ER + +E+E E IP + + +E N + VV+ +SD++
Sbjct: 570 YLEQVKKERESMEAQESESESMELEIPVVSEVSVTTESENLEE------VVSEHSDSKSP 623
Query: 551 HETIPNQNPIINLSEKLNPRKRKFESHVVNTYSDTEK 661
+ + N + +P +FE H + + + EK
Sbjct: 624 ETLVASDNGEDSSGGSEDPNATQFE-HEIEEHKEPEK 659
>Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 32.7 bits (71), Expect = 0.24
Identities = 22/97 (22%), Positives = 46/97 (47%)
Frame = +2
Query: 371 FLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSEKLNPRKRKFESHVVNTYSDTEQQ 550
+LE++++ER + +E+E E IP + + +E N + VV+ +SD++
Sbjct: 568 YLEQVKKERESMEAQESESESMELEIPVVSEVSVTTESENLEE------VVSEHSDSKSP 621
Query: 551 HETIPNQNPIINLSEKLNPRKRKFESHVVNTYSDTEK 661
+ + N + +P +FE H + + + EK
Sbjct: 622 ETLVASDNGEDSSGGSEDPNATQFE-HEIEEHKEPEK 657
>AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 32.7 bits (71), Expect = 0.24
Identities = 22/97 (22%), Positives = 46/97 (47%)
Frame = +2
Query: 371 FLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSEKLNPRKRKFESHVVNTYSDTEQQ 550
+LE++++ER + +E+E E IP + + +E N + VV+ +SD++
Sbjct: 570 YLEQVKKERESMEAQESESESMELEIPVVSEVSVTTESENLEE------VVSEHSDSKSP 623
Query: 551 HETIPNQNPIINLSEKLNPRKRKFESHVVNTYSDTEK 661
+ + N + +P +FE H + + + EK
Sbjct: 624 ETLVASDNGEDSSGGSEDPNATQFE-HEIEEHKEPEK 659
>AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 32.7 bits (71), Expect = 0.24
Identities = 22/97 (22%), Positives = 46/97 (47%)
Frame = +2
Query: 371 FLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSEKLNPRKRKFESHVVNTYSDTEQQ 550
+LE++++ER + +E+E E IP + + +E N + VV+ +SD++
Sbjct: 568 YLEQVKKERESMEAQESESESMELEIPVVSEVSVTTESENLEE------VVSEHSDSKSP 621
Query: 551 HETIPNQNPIINLSEKLNPRKRKFESHVVNTYSDTEK 661
+ + N + +P +FE H + + + EK
Sbjct: 622 ETLVASDNGEDSSGGSEDPNATQFE-HEIEEHKEPEK 657
>AF026207-1|AAB71266.1| 522|Caenorhabditis elegans Hypothetical
protein H42K12.3 protein.
Length = 522
Score = 32.7 bits (71), Expect = 0.24
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +2
Query: 200 GKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCIKCFTSEE 328
G V S +K K S EE+KT F+T +AS + + TSEE
Sbjct: 13 GSVTSKAVKAKDSCEESKTHFFVTDNASLQSADPIVYKATSEE 55
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 32.3 bits (70), Expect = 0.32
Identities = 20/83 (24%), Positives = 35/83 (42%)
Frame = +2
Query: 119 SPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIE 298
S G ++V N+P E+E+ F+ G VN++ + + FAF+ S +
Sbjct: 3 SQGFSVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFS-EEAGAQ 61
Query: 299 SCIKCFTSEEFKGSRLYVTRARE 367
++ F G L V A +
Sbjct: 62 RAVEQLNGVAFNGRNLRVNYANK 84
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 32.3 bits (70), Expect = 0.32
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 128 TRLFVSNIPENTNEDELRCAFSKFGKVNSLDL 223
++LFV N+P+N + ++L+ F F KV D+
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDI 34
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 128 TRLFVSNIPENTNEDELRCAFSKFGKVNSL 217
+++FV N+ +DEL+ FSKFG V S+
Sbjct: 683 SKVFVRNVHFQATDDELKALFSKFGTVTSV 712
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 125 GTRLFVSNIPENTNEDELRCAFSKFGKVNSLDL 223
G +FV+NI E ED++ FS++GK+ ++ L
Sbjct: 54 GWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHL 86
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 32.3 bits (70), Expect = 0.32
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 128 TRLFVSNIPENTNEDELRCAFSKFGKVNSLDL 223
++LFV N+P+N + ++L+ F F KV D+
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDI 34
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 113 SMSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFIT 271
S PG ++F+ + T + LR F +FG+VN + + + + F FIT
Sbjct: 41 SQDPG-KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFIT 92
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/58 (17%), Positives = 27/58 (46%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESC 304
++F+ + + ++++ F +GKV L + + ++ F F+T + + C
Sbjct: 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVC 192
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 31.9 bits (69), Expect = 0.42
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITL 274
++ VSNI + +L+ FS++GK+ S C EE KT F TL
Sbjct: 113 KIVVSNISAKVTQSQLQSFFSQYGKITS----CILPREEKKTSVFGTL 156
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 113 SMSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFIT 271
S PG ++F+ + T + LR F +FG+VN + + + + F FIT
Sbjct: 41 SQDPG-KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFIT 92
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/58 (17%), Positives = 27/58 (46%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESC 304
++F+ + + ++++ F +GKV L + + ++ F F+T + + C
Sbjct: 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVC 192
>Z81084-7|CAB03111.1| 312|Caenorhabditis elegans Hypothetical
protein F46A9.6 protein.
Length = 312
Score = 31.5 bits (68), Expect = 0.56
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +2
Query: 80 SLRYFQ*NCKLSMSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKS 235
SL++ Q + S S + LFV+N+ NED LR F F L L K+
Sbjct: 212 SLQHSQQASQASTSACSTLFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKN 263
>Z81037-10|CAB02754.1| 312|Caenorhabditis elegans Hypothetical
protein F46A9.6 protein.
Length = 312
Score = 31.5 bits (68), Expect = 0.56
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +2
Query: 80 SLRYFQ*NCKLSMSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKS 235
SL++ Q + S S + LFV+N+ NED LR F F L L K+
Sbjct: 212 SLQHSQQASQASTSACSTLFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKN 263
>X95609-1|CAA64867.1| 312|Caenorhabditis elegans mec-8 protein.
Length = 312
Score = 31.5 bits (68), Expect = 0.56
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +2
Query: 80 SLRYFQ*NCKLSMSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKS 235
SL++ Q + S S + LFV+N+ NED LR F F L L K+
Sbjct: 212 SLQHSQQASQASTSACSTLFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKN 263
>X95608-1|CAA64866.1| 312|Caenorhabditis elegans mec-8 protein.
Length = 312
Score = 31.5 bits (68), Expect = 0.56
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +2
Query: 80 SLRYFQ*NCKLSMSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKS 235
SL++ Q + S S + LFV+N+ NED LR F F L L K+
Sbjct: 212 SLQHSQQASQASTSACSTLFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKN 263
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 31.5 bits (68), Expect = 0.56
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +2
Query: 125 GTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESC 304
G ++V +IP + ED L F K GK+ L L ++ +AF+T + D +
Sbjct: 199 GHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTY-CNKEDAAAA 257
Query: 305 IKCFTSEE 328
K + E
Sbjct: 258 AKTYDGHE 265
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 31.5 bits (68), Expect = 0.56
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 128 TRLFVSNIPENTNEDELRCAFSKFGKVNSL 217
T ++V NI N EDE+R AF +FG +N +
Sbjct: 256 TSVYVGNIA-NLGEDEIRRAFDRFGPINEV 284
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 31.1 bits (67), Expect = 0.73
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 134 LFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFI 268
+FV NI + +ED +R FSK G V S+ + + K + FI
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFI 64
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 31.1 bits (67), Expect = 0.73
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +2
Query: 113 SMSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCK-SSIEENKTFAFITLSASNY 289
S++ G +F+ N+ +T E+ ++ SKFGK++ L + CK +K AF+ S +
Sbjct: 258 SITEGKVVFLRNLSYDTKEELIKEELSKFGKID-LAIICKYKDSGHSKGTAFVHFS-TPI 315
Query: 290 DIESCIK 310
+ +CI+
Sbjct: 316 EASNCIE 322
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +2
Query: 65 EYLTTSLRYFQ*NCKLSMSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIE 244
E + ++R N + +SP RL + N+P+ N+ +L+ KF +L +C+ ++
Sbjct: 391 ERIAEAMRKKLENTNMFISP-VRLCIHNLPQKINDVKLKELAQKFTSPGALITECRVWMD 449
Query: 245 ENK 253
+ +
Sbjct: 450 KKR 452
>AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical
protein M01B12.4b protein.
Length = 644
Score = 31.1 bits (67), Expect = 0.73
Identities = 18/75 (24%), Positives = 40/75 (53%)
Frame = +2
Query: 356 RARESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSEKLNPRKRKFESHVVNTYS 535
R R+ + ER +ER+ A RKE E++++H T+ ++ + ++ L + + +
Sbjct: 7 RKRKEYAERKVKERHAALRKEAEEKRKH-TVEHRERVQSV---LKREQIALQKRMQQLNE 62
Query: 536 DTEQQHETIPNQNPI 580
D E++ T+ Q+ +
Sbjct: 63 DEERKKVTLAKQHEV 77
>AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical
protein M01B12.4c protein.
Length = 678
Score = 31.1 bits (67), Expect = 0.73
Identities = 18/75 (24%), Positives = 40/75 (53%)
Frame = +2
Query: 356 RARESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSEKLNPRKRKFESHVVNTYS 535
R R+ + ER +ER+ A RKE E++++H T+ ++ + ++ L + + +
Sbjct: 7 RKRKEYAERKVKERHAALRKEAEEKRKH-TVEHRERVQSV---LKREQIALQKRMQQLNE 62
Query: 536 DTEQQHETIPNQNPI 580
D E++ T+ Q+ +
Sbjct: 63 DEERKKVTLAKQHEV 77
>AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical
protein M01B12.4a protein.
Length = 634
Score = 31.1 bits (67), Expect = 0.73
Identities = 18/75 (24%), Positives = 40/75 (53%)
Frame = +2
Query: 356 RARESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSEKLNPRKRKFESHVVNTYS 535
R R+ + ER +ER+ A RKE E++++H T+ ++ + ++ L + + +
Sbjct: 7 RKRKEYAERKVKERHAALRKEAEEKRKH-TVEHRERVQSV---LKREQIALQKRMQQLNE 62
Query: 536 DTEQQHETIPNQNPI 580
D E++ T+ Q+ +
Sbjct: 63 DEERKKVTLAKQHEV 77
>Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical
protein F43D9.1 protein.
Length = 1226
Score = 30.7 bits (66), Expect = 0.97
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +2
Query: 275 SASNYDIESCIKCFTSEEFKGSRLYVTRARESFLERLQRERNEAQRKETEKEQQHETIPN 454
S +NY S + T E + S L + ER++RER E + K ++++ + N
Sbjct: 57 SNNNYSSTSTVAAPTREPTRVSTLKREEKEKKQKERMERERRELEEKRVQEDEMKKEEHN 116
Query: 455 QNPIINLSEK 484
+L E+
Sbjct: 117 HTVHPSLGER 126
>Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical
protein F43D9.1 protein.
Length = 1226
Score = 30.7 bits (66), Expect = 0.97
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +2
Query: 275 SASNYDIESCIKCFTSEEFKGSRLYVTRARESFLERLQRERNEAQRKETEKEQQHETIPN 454
S +NY S + T E + S L + ER++RER E + K ++++ + N
Sbjct: 57 SNNNYSSTSTVAAPTREPTRVSTLKREEKEKKQKERMERERRELEEKRVQEDEMKKEEHN 116
Query: 455 QNPIINLSEK 484
+L E+
Sbjct: 117 HTVHPSLGER 126
>U40160-1|AAA81155.3| 531|Caenorhabditis elegans Hypothetical
protein C56E10.3 protein.
Length = 531
Score = 30.7 bits (66), Expect = 0.97
Identities = 14/64 (21%), Positives = 32/64 (50%)
Frame = +2
Query: 233 SSIEENKTFAFITLSASNYDIESCIKCFTSEEFKGSRLYVTRARESFLERLQRERNEAQR 412
+ +E+N +F+ N ++ ++ + + + K +LYV E+ LE+ +ER +
Sbjct: 88 TKVEQNAEASFLLQQQKNNEMNEAVQQWAAVDVKEEKLYVDLTHETELEKQFKERYDEIT 147
Query: 413 KETE 424
+ E
Sbjct: 148 RNLE 151
Score = 27.5 bits (58), Expect = 9.1
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Frame = +2
Query: 200 GKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCIKCFTSEEFKGSRLYVTR-ARESFL 376
GK LD KC + K A + S D+ES S+E S V + A SFL
Sbjct: 40 GKRKQLDKKCGEYEQLCKKTAKLKAEKSRLDVESTQLTAQSDEIDQSFTKVEQNAEASFL 99
Query: 377 ERLQR--ERNEAQRKETEKEQQHETI 448
+ Q+ E NEA ++ + + E +
Sbjct: 100 LQQQKNNEMNEAVQQWAAVDVKEEKL 125
>L10986-10|AAL08032.1| 111|Caenorhabditis elegans Hypothetical
protein F10E9.11 protein.
Length = 111
Score = 30.7 bits (66), Expect = 0.97
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +2
Query: 332 KGSRLYVTRARESFLERLQRERNEAQRKETEKEQQHETIPNQN 460
K ++ ++A++ +L Q + E QR+ E+E+++ETI N
Sbjct: 25 KQKKMSFSQAQDVYLRLKQEKEEEKQRERAEREKRNETIAATN 67
>AL117193-9|CAB60302.2| 737|Caenorhabditis elegans Hypothetical
protein Y105C5A.15 protein.
Length = 737
Score = 30.7 bits (66), Expect = 0.97
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 242 EENKTFAFITLSASNYDIESCIKCF 316
E N+TF IT+ SN D+E +KCF
Sbjct: 421 ELNRTFLRITIPNSNNDLEGNVKCF 445
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 30.7 bits (66), Expect = 0.97
Identities = 11/49 (22%), Positives = 28/49 (57%)
Frame = +2
Query: 128 TRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITL 274
T++FV +P +T++ L F +FG + + + ++++ + F+T+
Sbjct: 35 TKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTM 83
>U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 3 protein.
Length = 217
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 122 PGTRLFVSNIPENTNEDELRCAFSKF 199
P LF SNIPE T ++++ FS+F
Sbjct: 141 PNNILFCSNIPEGTEPEQIQTIFSQF 166
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 128 TRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFI 268
T L++ + NTN+D LR SK+G + S + K + F+
Sbjct: 107 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFV 153
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 128 TRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFI 268
T L++ + NTN+D LR SK+G + S + K + F+
Sbjct: 81 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFV 127
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/97 (20%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +2
Query: 377 ERLQRERNEAQRKETE-KEQQHETIPNQNPIINLSEKLNPRKRKFESHVVNTYSDTEQQH 553
E ++E+NE ++KE E KE HE ++ +E +++ + + D +++
Sbjct: 69 EEAEKEKNEKEKKEEEKKEDGHEKKEDKKEDKKENENDEKKEKSKDDKKEESKEDKKEKT 128
Query: 554 ETIPNQNPIINLSEKLNPRKRKFESHVVNTYSDTEKK 664
+T N+ ++ K+ + T D EK+
Sbjct: 129 KTEDNEGKNEEKKKEKKEEKKDEKEKKEKTEDDKEKE 165
>AF357877-1|AAK27715.1| 835|Caenorhabditis elegans
receptor-mediated endocytosis 1isoform II protein.
Length = 835
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +2
Query: 368 SFLERLQRERNE-AQRKETEKEQQHETIPNQN--PIINLSEKLNPRKRKFESHVVNTYSD 538
S E L E + ++R E EK++ + ++ P E P K E H S+
Sbjct: 122 SSFEELNAETEDLSERSEVEKDEDLGRVVEEHKEPAQVPVESETPETSKKEIHQEEEISE 181
Query: 539 TEQQHETIPNQNPIINLSEKLNPRKRK 619
E+ ET+ + ++N S ++ K++
Sbjct: 182 LEKVPETVEEEIEVVNTSVEITEVKKE 208
>AC006695-13|AAF39978.1| 786|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform a protein.
Length = 786
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +2
Query: 368 SFLERLQRERNE-AQRKETEKEQQHETIPNQN--PIINLSEKLNPRKRKFESHVVNTYSD 538
S E L E + ++R E EK++ + ++ P E P K E H S+
Sbjct: 73 SSFEELNAETEDLSERSEVEKDEDLGRVVEEHKEPAQVPVESETPETSKKEIHQEEEISE 132
Query: 539 TEQQHETIPNQNPIINLSEKLNPRKRK 619
E+ ET+ + ++N S ++ K++
Sbjct: 133 LEKVPETVEEEIEVVNTSVEITEVKKE 159
>AC006695-11|AAF39979.1| 835|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform b protein.
Length = 835
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +2
Query: 368 SFLERLQRERNE-AQRKETEKEQQHETIPNQN--PIINLSEKLNPRKRKFESHVVNTYSD 538
S E L E + ++R E EK++ + ++ P E P K E H S+
Sbjct: 122 SSFEELNAETEDLSERSEVEKDEDLGRVVEEHKEPAQVPVESETPETSKKEIHQEEEISE 181
Query: 539 TEQQHETIPNQNPIINLSEKLNPRKRK 619
E+ ET+ + ++N S ++ K++
Sbjct: 182 LEKVPETVEEEIEVVNTSVEITEVKKE 208
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/55 (29%), Positives = 33/55 (60%)
Frame = +2
Query: 113 SMSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLS 277
S + G LFV N+ +T++ L FS+FG + ++ + + ++ K +AF+++S
Sbjct: 369 SDTAGYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKI-LRDLTQQCKGYAFVSMS 422
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/66 (24%), Positives = 30/66 (45%)
Frame = +2
Query: 74 TTSLRYFQ*NCKLSMSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENK 253
TTS N + G LF+ ++P++ + +L F+ FG + S + +K
Sbjct: 317 TTSAAQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSK 376
Query: 254 TFAFIT 271
F F++
Sbjct: 377 CFGFVS 382
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 29.1 bits (62), Expect = 3.0
Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 2/130 (1%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCIK 310
RL++ IP N E ++ +GK+N++ +K FAF+ S D E
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMK--------YGFAFVDFEDSR-DAEDACH 53
Query: 311 CFTSEEFKGS--RLYVTRARESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSEK 484
+ +GS RL V AR R + + R+ + ++ P + + K
Sbjct: 54 DLDGKTMEGSSMRLVVEMARGK-PRGNDRHGSRSPRRRSRSPRRRSRTPPRRRSRSRDRK 112
Query: 485 LNPRKRKFES 514
+ R R S
Sbjct: 113 RSRRSRSRSS 122
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 29.1 bits (62), Expect = 3.0
Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 2/130 (1%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCIK 310
RL++ IP N E ++ +GK+N++ +K FAF+ S D E
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMK--------YGFAFVDFEDSR-DAEDACH 53
Query: 311 CFTSEEFKGS--RLYVTRARESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSEK 484
+ +GS RL V AR R + + R+ + ++ P + + K
Sbjct: 54 DLDGKTMEGSSMRLVVEMARGK-PRGNDRHGSRSPRRRSRSPRRRSRTPPRRRSRSRDRK 112
Query: 485 LNPRKRKFES 514
+ R R S
Sbjct: 113 RSRRSRSRSS 122
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 29.1 bits (62), Expect = 3.0
Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 2/130 (1%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNYDIESCIK 310
RL++ IP N E ++ +GK+N++ +K FAF+ S D E
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMK--------YGFAFVDFEDSR-DAEDACH 53
Query: 311 CFTSEEFKGS--RLYVTRARESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSEK 484
+ +GS RL V AR R + + R+ + ++ P + + K
Sbjct: 54 DLDGKTMEGSSMRLVVEMARGK-PRGNDRHGSRSPRRRSRSPRRRSRTPPRRRSRSRDRK 112
Query: 485 LNPRKRKFES 514
+ R R S
Sbjct: 113 RSRRSRSRSS 122
>AL021492-14|CAA16388.2| 473|Caenorhabditis elegans Hypothetical
protein Y45F10D.13a protein.
Length = 473
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 350 VTRARESFLERLQRERNEAQRKETEKEQQHETIPNQNPII-NLSEKLNPRKRKFESHV 520
V ++ E L RL+ E+ A+ EKE++H IP+ P + N ++LN F S +
Sbjct: 84 VKQSNEEELLRLKAEKL-AEELRKEKERKHSFIPSSAPSLQNNMDRLNSLLYDFSSDI 140
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/55 (20%), Positives = 31/55 (56%)
Frame = +2
Query: 107 KLSMSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFIT 271
++ S +FV ++ ++ + + L+ F+KFG+V+ + +++K + F++
Sbjct: 128 RIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVS 182
>Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical
protein C54D10.12 protein.
Length = 500
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 380 RLQRERNEAQRKETEKEQQHETIPNQNPIINLSEKLNPRKRKFESHVVNTYSDTEQQH-E 556
R ++++NEA+ K +E+Q E + + L E ++RK + ++ + E++
Sbjct: 54 RFEKQKNEAREKRKREEEQEER-QFKESLKLLDESRREKERKLQELLLRQKEEAEEEALR 112
Query: 557 TIPNQNPIINLSEKL 601
+ N + I EK+
Sbjct: 113 RLANDSEIEQKLEKI 127
>Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical
protein C54D10.7 protein.
Length = 1144
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 380 RLQRERNEAQRKETEKEQQHETIPNQNPIINLSEKLNPRKRKFESHVVNTYSDTEQQH-E 556
R ++++NEA+ K +E+Q E + + L E ++RK + ++ + E++
Sbjct: 759 RFEKQKNEAREKRKREEEQEER-QFKESLKLLDESRREKERKLQELLLRQKEEAEEEALR 817
Query: 557 TIPNQNPIINLSEKL 601
+ N + I EK+
Sbjct: 818 RLANDSEIEQKLEKI 832
>Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/70 (21%), Positives = 31/70 (44%)
Frame = +2
Query: 413 KETEKEQQHETIPNQNPIINLSEKLNPRKRKFESHVVNTYSDTEQQHETIPNQNPIINLS 592
K E E + ++ P IN + +P+KR T + ++ P + +I +
Sbjct: 1473 KRKRSEAVVEEVEDEEPEINDKKSPSPKKRVSGRRSAPTPTKNSKKAPVSPKKKTLIKET 1532
Query: 593 EKLNPRKRKF 622
++P+K K+
Sbjct: 1533 NGVSPKKNKY 1542
>U55854-8|AAK68159.1| 131|Caenorhabditis elegans Hypothetical
protein C04G6.11 protein.
Length = 131
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +2
Query: 302 CIKCFTSEEFKGSRLYVTRARESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSE 481
C+ C T +EF+ + FL++L R+ + + K + + + I +SE
Sbjct: 11 CVLCATFQEFEKQLFSIRILIFKFLQKLSRKTESKNLRYSGKNNIYPQLAKE--IDKISE 68
Query: 482 KLNPRKRKFES 514
K RKR+ S
Sbjct: 69 KNRGRKREIGS 79
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITL 274
RLFV N+P E EL+ FS G + +C S K FAF+ L
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDI----AECYLS---GKGFAFLRL 157
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITL 274
RLFV N+P E EL+ FS G + +C S K FAF+ L
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDI----AECYLS---GKGFAFLRL 157
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +2
Query: 131 RLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITL 274
RLFV N+P E EL+ FS G + +C S K FAF+ L
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDI----AECYLS---GKGFAFLRL 157
>AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/70 (21%), Positives = 31/70 (44%)
Frame = +2
Query: 413 KETEKEQQHETIPNQNPIINLSEKLNPRKRKFESHVVNTYSDTEQQHETIPNQNPIINLS 592
K E E + ++ P IN + +P+KR T + ++ P + +I +
Sbjct: 1473 KRKRSEAVVEEVEDEEPEINDKKSPSPKKRVSGRRSAPTPTKNSKKAPVSPKKKTLIKET 1532
Query: 593 EKLNPRKRKF 622
++P+K K+
Sbjct: 1533 NGVSPKKNKY 1542
>Z30973-4|CAA83220.3| 431|Caenorhabditis elegans Hypothetical
protein B0284.1 protein.
Length = 431
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/79 (17%), Positives = 35/79 (44%)
Frame = +2
Query: 395 RNEAQRKETEKEQQHETIPNQNPIINLSEKLNPRKRKFESHVVNTYSDTEQQHETIPNQN 574
R + + ETEK+ + + +N EKL+ K++++ + + + E + Q
Sbjct: 132 REQGRLAETEKKIEENVVDMKNKKAEAQEKLHSEKKEYDEKKLQKSEENALKIEDLHKQT 191
Query: 575 PIINLSEKLNPRKRKFESH 631
+ + ++ N + + H
Sbjct: 192 AQLEIEKENNAIEHQNRIH 210
>AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical
protein C35E7.5b protein.
Length = 954
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 116 MSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAF 265
MS T L + PE+ E +L +S+ K N + + CK++ F +
Sbjct: 1 MSVSTLLKTESHPESVMETDLTLLYSRRCKTNDIIIFCKNAARNGGVFKY 50
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 116 MSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAF 265
MS T L + PE+ E +L +S+ K N + + CK++ F +
Sbjct: 1 MSVSTLLKTESHPESVMETDLTLLYSRRCKTNDIIIFCKNAARNGGVFKY 50
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 440 ETIPNQNPIINLSEKLNPRKRKFESHVVNTYSDTEQQHETIPN 568
E + +++ ++ + FE +V Y+DT + HE +PN
Sbjct: 2145 ELVTQNTSLVSSHDRGSFNNPVFEQEMVPIYNDTVENHELLPN 2187
>Z83230-2|CAC42304.1| 444|Caenorhabditis elegans Hypothetical
protein F56A8.3a protein.
Length = 444
Score = 27.9 bits (59), Expect = 6.8
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +2
Query: 350 VTRARESFLERLQRERNE--AQRKETEKEQQHETIPNQNPIINLSEKLNPRKRKFESH-V 520
V +A+E + +E+ E A +KE + +QQ ET+ + N S++ P+ +K E H
Sbjct: 169 VQKAQEEERMKKNQEKKEKAAAKKEKDAKQQRETVNAASHKNNHSQQ--PKSQKKEPHPK 226
Query: 521 VNTYSDTEQ 547
N TEQ
Sbjct: 227 KNEQKKTEQ 235
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
F07A11.6e protein.
Length = 2101
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +2
Query: 326 EFKGSRLYVTRARESFLERLQRERNEAQ-RKETEKEQQHETIPNQNPIINLSEKLNPRKR 502
E K R + +ER +R +E Q RK +K+++ E + + +EK +K+
Sbjct: 792 EMKRKETKEERNKRKEMERAKRLEDERQERKREKKKERDERKKEKEKVRKKAEKEKLKKK 851
Query: 503 KFESHVVNTYSDTEQQHE 556
K + SD++ E
Sbjct: 852 KHRKGDSSDESDSDSNDE 869
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +2
Query: 326 EFKGSRLYVTRARESFLERLQRERNEAQ-RKETEKEQQHETIPNQNPIINLSEKLNPRKR 502
E K R + +ER +R +E Q RK +K+++ E + + +EK +K+
Sbjct: 1083 EMKRKETKEERNKRKEMERAKRLEDERQERKREKKKERDERKKEKEKVRKKAEKEKLKKK 1142
Query: 503 KFESHVVNTYSDTEQQHE 556
K + SD++ E
Sbjct: 1143 KHRKGDSSDESDSDSNDE 1160
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +2
Query: 326 EFKGSRLYVTRARESFLERLQRERNEAQ-RKETEKEQQHETIPNQNPIINLSEKLNPRKR 502
E K R + +ER +R +E Q RK +K+++ E + + +EK +K+
Sbjct: 1098 EMKRKETKEERNKRKEMERAKRLEDERQERKREKKKERDERKKEKEKVRKKAEKEKLKKK 1157
Query: 503 KFESHVVNTYSDTEQQHE 556
K + SD++ E
Sbjct: 1158 KHRKGDSSDESDSDSNDE 1175
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +2
Query: 326 EFKGSRLYVTRARESFLERLQRERNEAQ-RKETEKEQQHETIPNQNPIINLSEKLNPRKR 502
E K R + +ER +R +E Q RK +K+++ E + + +EK +K+
Sbjct: 1098 EMKRKETKEERNKRKEMERAKRLEDERQERKREKKKERDERKKEKEKVRKKAEKEKLKKK 1157
Query: 503 KFESHVVNTYSDTEQQHE 556
K + SD++ E
Sbjct: 1158 KHRKGDSSDESDSDSNDE 1175
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 365 ESFLERLQRERNEAQRKETEKEQQHETIPNQNP 463
E L+R QRE+ + Q+++ +++QQ + P Q P
Sbjct: 288 ELHLQR-QREQQQQQQQQQQQQQQRQQNPQQQP 319
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +2
Query: 326 EFKGSRLYVTRARESFLERLQRERNEAQ-RKETEKEQQHETIPNQNPIINLSEKLNPRKR 502
E K R + +ER +R +E Q RK +K+++ E + + +EK +K+
Sbjct: 792 EMKRKETKEERNKRKEMERAKRLEDERQERKREKKKERDERKKEKEKVRKKAEKEKLKKK 851
Query: 503 KFESHVVNTYSDTEQQHE 556
K + SD++ E
Sbjct: 852 KHRKGDSSDESDSDSNDE 869
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +2
Query: 326 EFKGSRLYVTRARESFLERLQRERNEAQ-RKETEKEQQHETIPNQNPIINLSEKLNPRKR 502
E K R + +ER +R +E Q RK +K+++ E + + +EK +K+
Sbjct: 1083 EMKRKETKEERNKRKEMERAKRLEDERQERKREKKKERDERKKEKEKVRKKAEKEKLKKK 1142
Query: 503 KFESHVVNTYSDTEQQHE 556
K + SD++ E
Sbjct: 1143 KHRKGDSSDESDSDSNDE 1160
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +2
Query: 326 EFKGSRLYVTRARESFLERLQRERNEAQ-RKETEKEQQHETIPNQNPIINLSEKLNPRKR 502
E K R + +ER +R +E Q RK +K+++ E + + +EK +K+
Sbjct: 1098 EMKRKETKEERNKRKEMERAKRLEDERQERKREKKKERDERKKEKEKVRKKAEKEKLKKK 1157
Query: 503 KFESHVVNTYSDTEQQHE 556
K + SD++ E
Sbjct: 1158 KHRKGDSSDESDSDSNDE 1175
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +2
Query: 326 EFKGSRLYVTRARESFLERLQRERNEAQ-RKETEKEQQHETIPNQNPIINLSEKLNPRKR 502
E K R + +ER +R +E Q RK +K+++ E + + +EK +K+
Sbjct: 1098 EMKRKETKEERNKRKEMERAKRLEDERQERKREKKKERDERKKEKEKVRKKAEKEKLKKK 1157
Query: 503 KFESHVVNTYSDTEQQHE 556
K + SD++ E
Sbjct: 1158 KHRKGDSSDESDSDSNDE 1175
>L14745-11|AAA27919.2| 315|Caenorhabditis elegans Hypothetical
protein C02F5.4 protein.
Length = 315
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 377 ERLQRERNEAQRKETEKEQQHETIPNQNPIINLSEKLNPRKRKFESHVVNTYSDTEQQHE 556
E ++R +NE +ET + + I N I EKL ++ E + + E+ E
Sbjct: 230 EYVKRLKNETNERETLESNLNMLIENVRMSIEHHEKLCREVKRREDRIKADLLEVEKTFE 289
Query: 557 TIPN 568
++P+
Sbjct: 290 SLPD 293
>AF026208-2|AAB71269.3| 774|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 40
protein.
Length = 774
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +2
Query: 509 ESHVVNTYSDTEQQHETIPNQNP--IINLSEKLNPRKRKFESHVV 637
++H + TY T+ T PN P S +++ K+++ HV+
Sbjct: 705 QAHAIRTYQATKSASVTPPNPQPSAATRSSGRVSSSKKRYSGHVL 749
>AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical
protein K10G6.4 protein.
Length = 455
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/101 (19%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = +2
Query: 365 ESFLERLQRERNEAQRKETEKEQQ-HETIPNQNPIINLSEKLNPRKRKFESHVVNTYSDT 541
E LQ + N+ + ++++ E I +S K++ KRK ++ V
Sbjct: 100 EELQNELQDQNNQIDKLRIDRQELVKENDQLLEEIAEMSTKMDDYKRKEKAKEVEMRMKY 159
Query: 542 EQQHETIPNQNPIINLSEKLNPRKRKFESHVVNTYSDTEKK 664
+Q+ + I ++N ++++PR E + + +++ +KK
Sbjct: 160 DQKLKDI-----VMNKEKRVSPRFEHLEHKIEDLHAEIQKK 195
>Z68114-10|CAA92157.2| 322|Caenorhabditis elegans Hypothetical
protein F17A2.13 protein.
Length = 322
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +2
Query: 362 RESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSEKLNPRKRKFESHVVNTYS 535
+ESFL++ Q E E + E + E N+N + E N K E+ ++ + S
Sbjct: 83 KESFLKQSQNEEEEEKADVQENFDEQENAKNENDEV-FYENENEAKELVETPILRSLS 139
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 134 LFVSNIPENTNEDEL-RCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSAS 283
+F+ +P T +L RC +GKV+ + + ++ K A +T S S
Sbjct: 367 VFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTS 417
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 27.5 bits (58), Expect = 9.1
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 323 EEFKGSRLYVTRARESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSEKLNPR-K 499
EE K S T + ES LE Q E + Q + E+++Q + N I SEK R +
Sbjct: 740 EELKKSHTEHT-SLESVLEEQQNELAQLQDQLREEKEQSSNLLVLNQKIEKSEKEKERLE 798
Query: 500 RKFESHVVNTYSDTEQ 547
+ SH + SDT +
Sbjct: 799 EQIRSH-TSQNSDTSK 813
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 27.5 bits (58), Expect = 9.1
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 323 EEFKGSRLYVTRARESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINLSEKLNPR-K 499
EE K S T + ES LE Q E + Q + E+++Q + N I SEK R +
Sbjct: 740 EELKKSHTEHT-SLESVLEEQQNELAQLQDQLREEKEQSSNLLVLNQKIEKSEKEKERLE 798
Query: 500 RKFESHVVNTYSDTEQ 547
+ SH + SDT +
Sbjct: 799 EQIRSH-TSQNSDTSK 813
>U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis defect
protein 3, isoforma protein.
Length = 1175
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 113 SMSPGTRLFVSNIPENTNEDELRCAFSK 196
S G RL+ +PE+T ED+ R A +
Sbjct: 847 SFPSGARLYALELPESTGEDQWRVAMHR 874
>U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis defect
protein 3, isoformb protein.
Length = 1178
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 113 SMSPGTRLFVSNIPENTNEDELRCAFSK 196
S G RL+ +PE+T ED+ R A +
Sbjct: 850 SFPSGARLYALELPESTGEDQWRVAMHR 877
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 27.5 bits (58), Expect = 9.1
Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
Frame = +2
Query: 167 EDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSA-----SNYDIESCIKCFTSEEF 331
E E+ + FG VN L + SIE +K F +LS+ N+D S CF
Sbjct: 6389 EQEIVLSPKTFGSVNILKCLEEFSIEVDKLVNFSSLSSVVPLLGNFDYASA-NCFVEALT 6447
Query: 332 KGSRLYVTRARESFLERLQRERNEAQRKETEKEQQHETIPNQNPIINL 475
K Y+ + L L+ R + K + + Q + N+
Sbjct: 6448 KQGSKYIKQFLTLSLPPLEGSRMYESSTSSTKHNLSQILMFQEELTNV 6495
>AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical
protein C26G2.1 protein.
Length = 1270
Score = 27.5 bits (58), Expect = 9.1
Identities = 23/81 (28%), Positives = 35/81 (43%)
Frame = +2
Query: 92 FQ*NCKLSMSPGTRLFVSNIPENTNEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFIT 271
+Q N +++ T L ++ + N + E + GKV S D+K S+ NKTF T
Sbjct: 134 YQPNSIIAVKENTPLNITCVVPNV-KPEPEVLWYMDGKVMSRDVKQASTPHLNKTFTVYT 192
Query: 272 LSASNYDIESCIKCFTSEEFK 334
D K T E F+
Sbjct: 193 SLVVQSDRNDHGKVITCEAFQ 213
>AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin
c-terminal hydrolase protein.
Length = 1175
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 113 SMSPGTRLFVSNIPENTNEDELRCAFSK 196
S G RL+ +PE+T ED+ R A +
Sbjct: 847 SFPSGARLYALELPESTGEDQWRVAMHR 874
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,593,643
Number of Sequences: 27780
Number of extensions: 275022
Number of successful extensions: 1525
Number of sequences better than 10.0: 131
Number of HSP's better than 10.0 without gapping: 1221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1497
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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