Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15m24
(629 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 50 4e-07
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 38 0.001
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 36 0.005
SPBC56F2.01 |pof12||F-box protein Pof12|Schizosaccharomyces pomb... 32 0.059
SPAC13G6.09 |||zf-MYND type |Schizosaccharomyces pombe|chr 1|||M... 29 0.73
SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces pomb... 27 2.2
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 27 3.0
SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|c... 27 3.0
SPBC776.03 |||homoserine dehydrogenase |Schizosaccharomyces pomb... 27 3.0
SPBC17D11.04c |||histone acetyltransferase complex subunit Nto1 ... 26 3.9
SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces pomb... 26 5.2
SPCC1259.02c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 25 6.8
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 6.8
SPBP35G2.06c |nup131|Nup133a|nucleoporin Nup131|Schizosaccharomy... 25 9.0
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 49.6 bits (113), Expect = 4e-07
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2
Query: 80 FIEMLPDEVLIAIFKYLPLDCLLVCENVSQRWKRLARDTAVWRCIYL 220
F E+ P+EV + +F YL L C+ +S+RWKRL D +W+ +Y+
Sbjct: 72 FTEVFPEEVSLRVFSYLDQLDLCKCKLMSKRWKRLLEDPGIWKALYM 118
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 38.3 bits (85), Expect = 0.001
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 41 YSNTDWDGIGEWSFIEMLPDEVLIAIFKYLPLDCLLVCENVSQRWKRLARDTAVW 205
++++ D + F+ +LP E+ I +L L VS+ WK LA D +W
Sbjct: 96 FASSTLDSLVRLDFLSLLPVEISFRILSFLDARSLCQAAQVSKHWKELADDDVIW 150
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 35.9 bits (79), Expect = 0.005
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 92 LPDEVLIAIFKYLPLDCLLVCENVSQRWKRLARDTAVWRCIYLTYSA 232
LP E+LI IF +L LL + + WK+L D WR + + A
Sbjct: 34 LPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRTAFFHHFA 80
>SPBC56F2.01 |pof12||F-box protein Pof12|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 440
Score = 32.3 bits (70), Expect = 0.059
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 101 EVLIAIFKYLPLDCLLVCENVSQRWKRLARDTAVWRCIYLT-YSAKH 238
E L+ + L L E VS+ W + R ++VW +YL+ + KH
Sbjct: 17 ETLLHVLNDLSAHDLAALERVSRSWNSIVRRSSVWHNLYLSEFGTKH 63
>SPAC13G6.09 |||zf-MYND type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 274
Score = 28.7 bits (61), Expect = 0.73
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = -1
Query: 383 DQEKKYYHTSPTTF*---CLNKCAYTVISNCVC 294
DQ +YYH + F C N+C + I NC C
Sbjct: 174 DQIMRYYHATSNEFPGLWCNNECIPSSIPNCAC 206
>SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 814
Score = 27.1 bits (57), Expect = 2.2
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 148 GMRKCISKMEKTRKRHRRLEMYLLDVFC-KT*QSQGESE 261
G RK + K E T +R R MYL+DVF + +GE E
Sbjct: 439 GYRKDL-KSELTVERQRGTAMYLIDVFALRAGNEKGEDE 476
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 26.6 bits (56), Expect = 3.0
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +2
Query: 155 ENVSQRWKRLARDTAVWRCIYLTYSAKHDKVKESQKTLQVIGTHSECIHNLKLQ 316
EN+S + K DT++ I+ S + D++KE + L I + S+ + LK Q
Sbjct: 1045 ENISDKLKS-EEDTSLETPIHENQSIQSDQIKEVGEVLSAIKSLSDSVMLLKNQ 1097
>SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 577
Score = 26.6 bits (56), Expect = 3.0
Identities = 11/43 (25%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 89 MLPDEVLIAIFKYLPLDCLLVCENVSQRWKR-LARDTAVWRCI 214
+LP EVL+ I + L ++ C V + W+ + ++ +++ C+
Sbjct: 138 ILPREVLLCILQQLNFKSIVQCMQVCKHWRDCIKKEPSLFCCL 180
>SPBC776.03 |||homoserine dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 376
Score = 26.6 bits (56), Expect = 3.0
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 428 SQHPFRILFQSDTCIDQEKKYYHTSP 351
+ HPF L SD I K YHT P
Sbjct: 315 ASHPFANLQSSDNIISFTTKRYHTRP 340
>SPBC17D11.04c |||histone acetyltransferase complex subunit Nto1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 26.2 bits (55), Expect = 3.9
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 476 PSDGDLIIQYDKFKGLNTLELPEFGL-SRANCNTLLD 583
PS G ++YD + GLN LE+ + + S+ N +L D
Sbjct: 639 PSLGINGLEYDNWPGLNELEMSQLDIPSQGNLKSLHD 675
>SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 25.8 bits (54), Expect = 5.2
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = +2
Query: 290 ECIHNLKLQYMHTYSSIRMLLEKCDN 367
+C+ +L +Y H++ S+R + K +N
Sbjct: 513 KCVQSLPEKYAHSFPSVRNYIAKMEN 538
>SPCC1259.02c |||aminopeptidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 822
Score = 25.4 bits (53), Expect = 6.8
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 267 YKLSEHIANAYTI*NYSICTLIQALECCWRSVIIFFLLIYA 389
+K SEH+A TI +S+ T I L + II F +++A
Sbjct: 452 FKRSEHLALRATIFIFSLLTFI-PLPSAYLFTIIDFFMVFA 491
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.4 bits (53), Expect = 6.8
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 494 IIQYDKFKGLNTLELPEFGLSRANCNTLLDLKNLCHIEIEKINNL 628
+I+ + FKGL + + C TLL+ K++ H +++ N L
Sbjct: 788 LIKSNGFKGLPIVVIKSITRQLIQCLTLLNEKHVIHCDLKPENIL 832
>SPBP35G2.06c |nup131|Nup133a|nucleoporin Nup131|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1142
Score = 25.0 bits (52), Expect = 9.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 138 SSGRYLNIAIKTSSGNISMKLHSPMP 61
SSGR L++ +K S GN S+++ P
Sbjct: 198 SSGRLLHLNLKDSDGNSSIQVRILFP 223
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,638,182
Number of Sequences: 5004
Number of extensions: 55381
Number of successful extensions: 139
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 279695522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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