Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15m23
         (575 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.          22   3.8  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    21   6.6  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    21   6.6  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    21   6.6  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    21   6.6  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   8.7  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   8.7  
DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    21   8.7  
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    21   8.7  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    21   8.7  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    21   8.7  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    21   8.7  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    21   8.7  

>AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.
          Length = 88

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +1

Query: 85  WTKLCVIVLRK 117
           W+K+C++V RK
Sbjct: 53  WSKVCIVVRRK 63


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 280 QLPNFLYINPINASTKVEPP 221
           Q+P F YI P  +  +  PP
Sbjct: 371 QIPRFRYIGPPTSFPRFIPP 390


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 280 QLPNFLYINPINASTKVEPP 221
           Q+P F YI P  +  +  PP
Sbjct: 371 QIPRFRYIGPPTSFPRFIPP 390


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 280 QLPNFLYINPINASTKVEPP 221
           Q+P F YI P  +  +  PP
Sbjct: 371 QIPRFRYIGPPTSFPRFIPP 390


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 280 QLPNFLYINPINASTKVEPP 221
           Q+P F YI P  +  +  PP
Sbjct: 360 QIPRFRYIGPPTSFPRFIPP 379


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 280 QLPNFLYINPINASTKVEPP 221
           Q+P F YI P     +  PP
Sbjct: 144 QIPRFRYIGPSTPFPRFIPP 163


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 280 QLPNFLYINPINASTKVEPP 221
           Q+P F YI P     +  PP
Sbjct: 152 QIPRFRYIGPSTPFPRFIPP 171


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 280 QLPNFLYINPINASTKVEPP 221
           Q+P F YI P     +  PP
Sbjct: 152 QIPRFRYIGPSTPFPRFIPP 171


>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 280 QLPNFLYINPINASTKVEPP 221
           Q+P F YI P     +  PP
Sbjct: 144 QIPRFRYIGPSTPFPRFIPP 163


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 280 QLPNFLYINPINASTKVEPP 221
           Q+P F YI P     +  PP
Sbjct: 144 QIPRFRYIGPSTPFPRFIPP 163


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 280 QLPNFLYINPINASTKVEPP 221
           Q+P F YI P     +  PP
Sbjct: 144 QIPRFRYIGPSTPFPRFIPP 163


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 280 QLPNFLYINPINASTKVEPP 221
           Q+P F YI P     +  PP
Sbjct: 144 QIPRFRYIGPSTPFPRFIPP 163


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 280 QLPNFLYINPINASTKVEPP 221
           Q+P F YI P     +  PP
Sbjct: 144 QIPRFRYIGPSTPFPRFIPP 163


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 280 QLPNFLYINPINASTKVEPP 221
           Q+P F YI P     +  PP
Sbjct: 144 QIPRFRYIGPSTPFPRFIPP 163


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 280 QLPNFLYINPINASTKVEPP 221
           Q+P F YI P     +  PP
Sbjct: 144 QIPRFRYIGPSTPFPRFIPP 163


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 280 QLPNFLYINPINASTKVEPP 221
           Q+P F YI P     +  PP
Sbjct: 144 QIPRFRYIGPSTPFPRFIPP 163


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 280 QLPNFLYINPINASTKVEPP 221
           Q+P F YI P     +  PP
Sbjct: 360 QIPRFRYIGPSTPFPRFIPP 379


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 280 QLPNFLYINPINASTKVEPP 221
           Q+P F YI P     +  PP
Sbjct: 371 QIPRFRYIGPSTPFPRFIPP 390


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 280 QLPNFLYINPINASTKVEPP 221
           Q+P F YI P     +  PP
Sbjct: 377 QIPRFRYIGPSTPFPRFIPP 396


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 280 QLPNFLYINPINASTKVEPP 221
           Q+P F YI P     +  PP
Sbjct: 377 QIPRFRYIGPSTPFPRFIPP 396


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,317
Number of Sequences: 438
Number of extensions: 3274
Number of successful extensions: 51
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)