Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15m17
(725 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106592-2|AAK21364.1| 170|Caenorhabditis elegans Ferritin prot... 67 1e-11
AF016447-16|AAG24016.1| 170|Caenorhabditis elegans Ferritin pro... 65 4e-11
AF016683-1|AAB66199.3| 1360|Caenorhabditis elegans Hypothetical ... 29 2.6
AF067617-4|AAC17557.1| 381|Caenorhabditis elegans Hypothetical ... 29 4.5
Z66565-8|CAA91481.2| 308|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z54270-5|CAA91031.2| 1339|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z54270-4|CAA91030.2| 1804|Caenorhabditis elegans Hypothetical pr... 28 5.9
U40947-1|AAC48068.1| 610|Caenorhabditis elegans Hypothetical pr... 28 7.8
>AF106592-2|AAK21364.1| 170|Caenorhabditis elegans Ferritin protein
2 protein.
Length = 170
Score = 67.3 bits (157), Expect = 1e-11
Identities = 40/143 (27%), Positives = 68/143 (47%)
Frame = +3
Query: 198 INRQIQTEQQVAQHYLSLAVTFLNVKSLYHGAGGFFMKMYFEELDHMQGFIKYQLIRGNI 377
+N+QI E + YLS++ F FF + EE +H ++ Q +RG
Sbjct: 16 VNKQINIELYASYVYLSMSFYFDRDDVALPNIAKFFKEQSDEEREHATELMRVQNLRGGR 75
Query: 378 PNICGIEKPNLPDNLPLIEAFRYSLKMEEQVNQLLEEIVTEANDIKDYHCADFVTSVYLS 557
+ I+KP + ++AF +L +E+ N+ L ++ + A + D H DF+ YL
Sbjct: 76 VVLQDIQKPENDEWGTALKAFEAALALEKFNNESLLKLHSTAGNHNDAHLTDFIEEKYLD 135
Query: 558 EQIQSINEINHYIIKLSSFGDDI 626
EQ++SINE + L G +
Sbjct: 136 EQVKSINEFARMVANLKRVGPGV 158
>AF016447-16|AAG24016.1| 170|Caenorhabditis elegans Ferritin
protein 1 protein.
Length = 170
Score = 65.3 bits (152), Expect = 4e-11
Identities = 39/140 (27%), Positives = 63/140 (45%)
Frame = +3
Query: 198 INRQIQTEQQVAQHYLSLAVTFLNVKSLYHGAGGFFMKMYFEELDHMQGFIKYQLIRGNI 377
+N+QI E + YLS++ F FF + EE H ++ Q +RG
Sbjct: 16 VNKQINVELYASYVYLSMSAHFDRDDIALRNIAKFFKEQSDEERGHATELMRIQAVRGGR 75
Query: 378 PNICGIEKPNLPDNLPLIEAFRYSLKMEEQVNQLLEEIVTEANDIKDYHCADFVTSVYLS 557
+ I+KP + ++EAF +L +E N L ++ A D H +++ YL
Sbjct: 76 VAMQNIQKPEKDEWGTVLEAFEAALALERANNASLLKLHGIAEQRNDAHLTNYIQEKYLE 135
Query: 558 EQIQSINEINHYIIKLSSFG 617
EQ+ SINE +I + G
Sbjct: 136 EQVHSINEFARHIANIKRAG 155
>AF016683-1|AAB66199.3| 1360|Caenorhabditis elegans Hypothetical
protein K09F6.3 protein.
Length = 1360
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 510 IKDYHCA--DFVTSVYLSEQIQSINEINHYIIKLSSFGDDIHAIHNFDTSLIKLFPFSNR 683
+KD+ D T V L E I S+N +N ++LSSF AI ++L F + +
Sbjct: 678 VKDFEKTGKDAATKVKLKEVIASLNSLNSIGLQLSSFATPFTAIGQSFSALDAFFVSNGK 737
Query: 684 L 686
+
Sbjct: 738 I 738
>AF067617-4|AAC17557.1| 381|Caenorhabditis elegans Hypothetical
protein T04D1.2 protein.
Length = 381
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 444 YSLKMEEQVNQLLEEIVTEANDIKDYHCADFVTSVYLSEQIQSINEIN-HYIIKLSSFGD 620
Y++K+E+ +N +EI+ ND++ + F+ +LS ++ S+ + H F D
Sbjct: 264 YNIKIEDLMNNNCKEIILWNNDLQIFEITKFICH-WLSGKLPSLERLRLHMFHDWEIFED 322
Query: 621 DIHAIHN 641
+ I N
Sbjct: 323 ILIGIDN 329
>Z66565-8|CAA91481.2| 308|Caenorhabditis elegans Hypothetical
protein T04F8.7a protein.
Length = 308
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = +3
Query: 147 YNYSNVKKHTACKIADLINRQIQTEQQVAQHYL----SLAVTFLNVKSLYHGAGGFFMKM 314
YNY +K+H+ + + R I T++ + Q + +A L + SL A
Sbjct: 103 YNYPEIKQHSYMEDRNEEERHISTKEHIKQIGVPVLPGIASAILPISSLELAAAPVATDQ 162
Query: 315 YFEELDHMQGFIKYQLIRGN 374
L H++ K+ +RG+
Sbjct: 163 NRAYLRHLENHKKFDTLRGD 182
>Z54270-5|CAA91031.2| 1339|Caenorhabditis elegans Hypothetical protein
F11C1.5b protein.
Length = 1339
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Frame = +3
Query: 489 IVTEANDIKDYHCADF-----VTSVYLSEQIQSINEINHYIIKLSSFGDDIHAIHNFDTS 653
+V N + YHC DF V + + + I IN I+L+ G D +H + +
Sbjct: 1071 LVASVNPPRLYHCKDFMDTESVDEINIHKIIPRFRAINKPRIRLAYLGGDNVLLHEEEAN 1130
Query: 654 LIKLFPFSNRLNLYXTK 704
+ +++ TK
Sbjct: 1131 FTAIISLPDKMAAVVTK 1147
>Z54270-4|CAA91030.2| 1804|Caenorhabditis elegans Hypothetical protein
F11C1.5a protein.
Length = 1804
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Frame = +3
Query: 489 IVTEANDIKDYHCADF-----VTSVYLSEQIQSINEINHYIIKLSSFGDDIHAIHNFDTS 653
+V N + YHC DF V + + + I IN I+L+ G D +H + +
Sbjct: 1071 LVASVNPPRLYHCKDFMDTESVDEINIHKIIPRFRAINKPRIRLAYLGGDNVLLHEEEAN 1130
Query: 654 LIKLFPFSNRLNLYXTK 704
+ +++ TK
Sbjct: 1131 FTAIISLPDKMAAVVTK 1147
>U40947-1|AAC48068.1| 610|Caenorhabditis elegans Hypothetical
protein R03E9.2 protein.
Length = 610
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 385 YVELRNQIY-LITFH*LKHLDTVLKWKNKLTNF 480
+ +Q++ L+T L H+DT+ KNKLTNF
Sbjct: 265 FTSFDDQVFPLMTLLKLNHIDTLNGDKNKLTNF 297
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,196,546
Number of Sequences: 27780
Number of extensions: 277165
Number of successful extensions: 699
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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