Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15m07
(677 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1098 - 30395704-30395837,30396644-30396751,30396933-303971... 77 1e-14
09_04_0676 - 19383757-19383890,19384308-19384415,19384493-193846... 66 2e-11
02_05_0873 - 32372143-32372287,32372678-32372754,32372863-323730... 60 2e-09
08_02_1381 - 26551920-26552053,26552963-26553070,26553154-265533... 59 4e-09
07_03_1385 + 26189034-26189294,26189427-26189636,26191016-261910... 56 3e-08
03_03_0128 - 14677152-14677296,14677381-14677457,14679836-14680312 56 3e-08
09_04_0359 + 16941904-16942110,16943636-16943785,16944084-169442... 53 2e-07
08_02_0963 + 23068851-23069042,23069262-23069414,23069590-230696... 38 0.007
06_01_0751 + 5630036-5630233,5630623-5630718,5631420-5631629,563... 36 0.023
07_03_0647 - 20253380-20253505,20253718-20253727,20253864-202539... 28 6.0
07_03_0642 - 20216944-20217069,20217282-20217291,20217428-202175... 28 6.0
>03_05_1098 -
30395704-30395837,30396644-30396751,30396933-30397119,
30398127-30398330
Length = 210
Score = 77.4 bits (182), Expect = 1e-14
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 8/194 (4%)
Frame = +3
Query: 120 LVVTLLNLVSNAYSYTVTVDAHAEECFYENV--EADTKLGLSFEIAEGGFL------DID 275
+VV + A S TVT EC +E V E DT G +F + + ID
Sbjct: 12 VVVAVAAWRGEALSVTVT----DTECIHEFVPYEGDTVSG-NFVVVDHDIFWSSDHPGID 66
Query: 276 VIILGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEIGEPQTK 455
+ + P GN ++ + +S + F AP G Y +CF N + P+ V F + +G +
Sbjct: 67 LTVTSPGGNTVYTLKGKSGDKFEFKAPRGGMYKFCFHNPYGA--PETVSFYIHVGHIPNE 124
Query: 456 SGNENEADHNKLEDMIKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMWSIFEAS 635
+ + + I EL L ++ +Q+Y++ R+ HR NEST RV+ ++I E
Sbjct: 125 HNLAKDEHLDPINVKIAELKEALESVTAEQKYLKAREARHRHTNESTRRRVMFYTIAEYL 184
Query: 636 VLLVMTIGQVYYLK 677
+ + QV Y++
Sbjct: 185 AFMGASALQVVYIR 198
>09_04_0676 -
19383757-19383890,19384308-19384415,19384493-19384679,
19384937-19385143
Length = 211
Score = 66.5 bits (155), Expect = 2e-11
Identities = 51/199 (25%), Positives = 98/199 (49%), Gaps = 8/199 (4%)
Frame = +3
Query: 102 LRISQWLVVTLLNLVSNAYSYTVTVDAHAEECFYENV--EADTKLGLSFEIAEGG----F 263
LR+ LV+ +L + A + +D EECF NV E DT + +SF + + +
Sbjct: 5 LRLGFLLVLCILAFLRPAAAIRFVIDR--EECFSHNVDYEGDT-VHVSFVVIKAETPWHY 61
Query: 264 LD--IDVIILGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEI 437
+ +D+++ P+GN IH + + S + F G + +CF+NK S + V F++ +
Sbjct: 62 TEDGVDLVVRDPNGNQIHDSRDKISDKFEFIVHRRGVHRFCFTNK--SPYHETVDFDVLV 119
Query: 438 GEPQTKSGNENEADHNKLEDMIKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMW 617
+ + + L + I +L L I+ +Q +++ + +NE+ + R V
Sbjct: 120 SHFSYYDQHAKDEHFSALFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAVHK 179
Query: 618 SIFEASVLLVMTIGQVYYL 674
+ FE++ L+ ++ QVY L
Sbjct: 180 AFFESAALIAASVVQVYLL 198
>02_05_0873 -
32372143-32372287,32372678-32372754,32372863-32373072,
32374645-32374869
Length = 218
Score = 60.1 bits (139), Expect = 2e-09
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 3/160 (1%)
Frame = +3
Query: 207 NVEADTKLGLSFEIAEGGFLDIDVIILGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFS 386
NV L +E I V + P GN +H E + G + F+ AG Y CF
Sbjct: 51 NVVVLADYALMYESHPSSHPTIAVKVTSPYGNTLHHNENATVGQFAFTTSEAGNYLACFW 110
Query: 387 NKMSSMTPKVVMFNLEIGEPQTKSGNENEADHNKLEDM---IKELATTLRTIKHDQEYMQ 557
S+ + NL+ + A K+E + +++L +++I + Y++
Sbjct: 111 ID-SAEKGSGISINLDWKIGIAAKDWDVIAKKEKIEGVELELRKLEVAVQSIHQNMIYLK 169
Query: 558 VRDRIHRSINESTNSRVVMWSIFEASVLLVMTIGQVYYLK 677
R+ R+++E TN+RV +SI SV +V++I Q+++L+
Sbjct: 170 AREAEMRTVSEKTNARVAWFSILSLSVCIVVSILQLWHLQ 209
>08_02_1381 -
26551920-26552053,26552963-26553070,26553154-26553340,
26554107-26554316
Length = 212
Score = 58.8 bits (136), Expect = 4e-09
Identities = 44/193 (22%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Frame = +3
Query: 120 LVVTLLNLVSNAYSYTVTVDAHAEECFYENVEAD-TKLGLSFEIAEGGFL------DIDV 278
LV+ + L+ A + +D EECF NVE + + +SF + + +D+
Sbjct: 12 LVLCTVALLRPAAAIRFVIDR--EECFSHNVEYEGDTVHVSFVVIKADTPWHYSEDGVDL 69
Query: 279 IILGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEIGEPQTKS 458
++ P+G + + ++S + F G + +CF+NK S + V F++ +G
Sbjct: 70 VVKDPNGAQVRDSRDKTSDKFEFIVQKRGVHRFCFTNK--SPYHETVDFDVHVGHFSYFD 127
Query: 459 GNENEADHNKLEDMIKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMWSIFEASV 638
+ + L + I +L L I+ +Q +++ + +NE+ + R V ++ E++
Sbjct: 128 QHAKDEHFAPLFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAVHKALLESAA 187
Query: 639 LLVMTIGQVYYLK 677
L+ ++ QVY L+
Sbjct: 188 LIAASVIQVYLLR 200
>07_03_1385 +
26189034-26189294,26189427-26189636,26191016-26191092,
26191196-26191340
Length = 230
Score = 56.0 bits (129), Expect = 3e-08
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 3/139 (2%)
Frame = +3
Query: 270 IDVIILGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEIGEPQ 449
I + + P GN +H AE SG + F+A AG Y CF P + F +
Sbjct: 84 ISLRVTSPYGNSVHYAENVPSGNFAFTATEAGDYLACFW-APDHKPPVSIGFEFDWRSGV 142
Query: 450 TKSGNENEADHNKLEDM---IKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMWS 620
N A +++ M +K+L T+++I + Y++ R+ +++N+ TNSR+
Sbjct: 143 AAKDWSNVAKKGQVDVMEMELKKLEETIKSIHEEMFYLREREEEMQNLNKQTNSRMAWLG 202
Query: 621 IFEASVLLVMTIGQVYYLK 677
+ L + Q+++LK
Sbjct: 203 FLSLGICLSVAGLQLWHLK 221
>03_03_0128 - 14677152-14677296,14677381-14677457,14679836-14680312
Length = 232
Score = 56.0 bits (129), Expect = 3e-08
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 4/140 (2%)
Frame = +3
Query: 270 IDVIILGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKV-VMFNLEIG-- 440
+ + + P GN +H +E SG + F+A AG Y CF T V F+ G
Sbjct: 86 VSLRVTSPYGNSLHYSENVQSGNFAFTASEAGDYLACFWAPDHRPTATVGFEFDWRSGVS 145
Query: 441 -EPQTKSGNENEADHNKLEDMIKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMW 617
T + + D ++E +K+L T+ +I + Y++ R+ + +N TNSR+
Sbjct: 146 ARDWTNVAKKGQVDMMEVE--LKKLEDTINSIHEEMFYLRAREEEMQELNRRTNSRMAWL 203
Query: 618 SIFEASVLLVMTIGQVYYLK 677
F ++ L + Q+++LK
Sbjct: 204 GFFSLAICLSVAGLQLWHLK 223
>09_04_0359 +
16941904-16942110,16943636-16943785,16944084-16944293,
16944376-16944452,16944554-16944698
Length = 262
Score = 52.8 bits (121), Expect = 2e-07
Identities = 33/135 (24%), Positives = 69/135 (51%), Gaps = 3/135 (2%)
Frame = +3
Query: 282 ILGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEIGEPQTKSG 461
+ P G+++H ++ S+G ++F+ AG Y CFS + VV NL+
Sbjct: 120 VTSPFGDIVHHKQKVSTGQFSFTTAEAGNYLACFSADGRNKR-LVVKLNLDWRVGIATKD 178
Query: 462 NENEADHNKLEDM---IKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMWSIFEA 632
++ A KLE + + +L T+++ I + ++ ++ R +E TN+R SI
Sbjct: 179 WDSVAKKEKLEGVELELVKLETSVQAIHENLLLLRSKEANMRDTSEKTNARATWLSIISL 238
Query: 633 SVLLVMTIGQVYYLK 677
V +++++ Q+++L+
Sbjct: 239 IVCIIVSVLQLWHLQ 253
>08_02_0963 +
23068851-23069042,23069262-23069414,23069590-23069666,
23069744-23069762,23070182-23070202
Length = 153
Score = 37.9 bits (84), Expect = 0.007
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Frame = +3
Query: 120 LVVTLLNLVSNAYSYTVTVDAHAEECFYENVEADTKLGLSFEIAEGGF-----LDIDVI- 281
L + L LV++ + + + A +CF E ++++ + ++I G+ L I VI
Sbjct: 8 LALALWCLVADGEAVWMELSTTATKCFSERIQSNVVVIGDYDILFDGYPTRPILSIQVIL 67
Query: 282 -----ILGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFS 386
+ P G V+H E+ G ++F+ G Y CFS
Sbjct: 68 GLLLQVTSPYGKVLHHREKVMQGQFSFNTAEPGVYLACFS 107
>06_01_0751 +
5630036-5630233,5630623-5630718,5631420-5631629,
5631735-5631811,5632204-5632222,5632304-5632348
Length = 214
Score = 36.3 bits (80), Expect = 0.023
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Frame = +3
Query: 282 ILGPDGNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEIGEPQTKSG 461
+ P GN +H E ++G + F+ AG Y CF S V NL+
Sbjct: 99 VTSPYGNTVHHNENATTGQFAFTTSEAGNYLACFWLD-SPEKGSGVSLNLDWKIGIAAKD 157
Query: 462 NENEADHNKLEDM---IKELATTLRTIKHDQEYMQVRDRIHRSI 584
+ A K+E + +++L + +I H+ Y++ R+ R++
Sbjct: 158 WDTVAKKEKIEGVELELRKLEAAVESIHHNLLYLKAREAEMRTL 201
>07_03_0647 -
20253380-20253505,20253718-20253727,20253864-20253977,
20254063-20254382
Length = 189
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 363 GKYTYCFSNKMSSMTPKVVMFNLEIGEPQTKSGNENE 473
GK S ++S+TP+V + + G+PQ K GN +
Sbjct: 34 GKVKRSDSVPVASITPRVALQTVNGGKPQRKHGNRQQ 70
>07_03_0642 -
20216944-20217069,20217282-20217291,20217428-20217541,
20217627-20217946
Length = 189
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 363 GKYTYCFSNKMSSMTPKVVMFNLEIGEPQTKSGNENE 473
GK S ++S+TP+V + + G+PQ K GN +
Sbjct: 34 GKVKRSDSVPVASITPRVALQTVNGGKPQRKHGNRQQ 70
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,379,408
Number of Sequences: 37544
Number of extensions: 304683
Number of successful extensions: 670
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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