Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15m07
(677 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF014940-5|AAB63937.1| 203|Caenorhabditis elegans Suppressor/en... 234 4e-62
AF039713-7|AAB96722.1| 203|Caenorhabditis elegans Hypothetical ... 107 5e-24
AL117207-7|CAB60397.1| 211|Caenorhabditis elegans Hypothetical ... 63 2e-10
Z68316-4|CAA92683.1| 234|Caenorhabditis elegans Hypothetical pr... 58 8e-09
Z74035-1|CAA98480.1| 204|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AF100673-4|AAP13734.2| 438|Caenorhabditis elegans Hypothetical ... 31 0.57
Z77665-8|CAB01224.2| 135|Caenorhabditis elegans Hypothetical pr... 29 4.0
AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical ... 29 4.0
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 28 5.3
AL021346-2|CAB63233.1| 419|Caenorhabditis elegans Hypothetical ... 28 7.0
Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical p... 27 9.3
AY741200-1|AAU89102.1| 596|Caenorhabditis elegans STE20-like se... 27 9.3
AL132898-15|CAC14417.2| 596|Caenorhabditis elegans Hypothetical... 27 9.3
>AF014940-5|AAB63937.1| 203|Caenorhabditis elegans
Suppressor/enhancer of lin-12 protein9 protein.
Length = 203
Score = 234 bits (573), Expect = 4e-62
Identities = 108/191 (56%), Positives = 148/191 (77%), Gaps = 4/191 (2%)
Frame = +3
Query: 117 WLVVTLLNLVSNAYSYTVTVDAHAEECFYENVEADTKLGLSFEIAEGGFLDIDVIILGPD 296
W++ L V+ A SY + VDA+ E+CF++ + + TK+GL FE+AEGGFLDIDV I GPD
Sbjct: 6 WILAVLF--VTPAASYFIHVDANEEQCFFDRLTSGTKMGLMFEVAEGGFLDIDVKITGPD 63
Query: 297 GNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEIGEPQTK----SGN 464
I+K ERESSG +TF+A G YTYCF NKMS+MTPK VMF +EI EP + + N
Sbjct: 64 NKEIYKGERESSGKFTFAAHMDGVYTYCFGNKMSTMTPKAVMFTVEITEPHQQAPGAAAN 123
Query: 465 ENEADHNKLEDMIKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMWSIFEASVLL 644
++ AD+ KLE+M++EL++ L ++KH+QEYM+VR+R+HR+INE+TNSRVVMW+ FEA VL+
Sbjct: 124 QDAADNAKLEEMVRELSSALMSVKHEQEYMEVRERVHRNINENTNSRVVMWAAFEAFVLV 183
Query: 645 VMTIGQVYYLK 677
MT+GQ++YLK
Sbjct: 184 GMTVGQIFYLK 194
>AF039713-7|AAB96722.1| 203|Caenorhabditis elegans Hypothetical
protein F57B10.5 protein.
Length = 203
Score = 107 bits (258), Expect = 5e-24
Identities = 55/188 (29%), Positives = 100/188 (53%), Gaps = 2/188 (1%)
Frame = +3
Query: 120 LVVTLLNLVSNAYSYTVTVDAHAEECFYENVEADTKLGLSFEIAEGGFLDIDVIILGPDG 299
+V ++L + + T + +A +CFYE+++ D F++ GG D+D+II P+G
Sbjct: 6 IVSSILVALGLSIELTFELPDNANQCFYEDLKKDVDTVFEFQVVTGGHYDVDLIIEDPNG 65
Query: 300 NVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEIGEPQTKSGNENEAD 479
V++K ++ F A G Y CFSN+ S+ + K+V + + G+ +
Sbjct: 66 KVLYKDTKKQYDSINFKAEVEGTYKACFSNEFSTFSHKIVYMDWQFGDQNALHAAVTQGA 125
Query: 480 H--NKLEDMIKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMWSIFEASVLLVMT 653
H +LE+ + LRTI Q + ++R+ R E N RV++WS+ +++V++ +
Sbjct: 126 HAMTQLENYAVAIGDKLRTIDDYQTHHRLREATGRKRAEELNERVMIWSLGQSAVVVFIG 185
Query: 654 IGQVYYLK 677
IGQV+ LK
Sbjct: 186 IGQVFLLK 193
>AL117207-7|CAB60397.1| 211|Caenorhabditis elegans Hypothetical
protein Y60A3A.9 protein.
Length = 211
Score = 63.3 bits (147), Expect = 2e-10
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 14/200 (7%)
Frame = +3
Query: 120 LVVTLLNLVSNAYSYTVTVDAHAEECFYENVEADTKLGLSFEIA-----EGGFLD----- 269
L++ LL+L + A S + ++CF E + +T + ++++ G+ D
Sbjct: 3 LLIALLSLATYADSLYFHIAETEKKCFIEEIPDETMVTGNYKVQLYDPNTKGYGDYPNIG 62
Query: 270 IDVIILGPDGNVIHKAERESSGIYTFSAPTAGKYTYC-FSNKMSSMTPKVVMFNLEIGEP 446
+ V + P+ VI + G +TF++ T G++ C +SN + + +L+I
Sbjct: 63 MHVEVKDPEDKVILSKLYTAEGRFTFTSNTPGEHVICIYSNSTAWFNGAQLRVHLDIQAG 122
Query: 447 QTKSGNENEADHNKLEDM---IKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMW 617
A +KL ++ I++L + I +Q Y + R+ R +ESTNSRV W
Sbjct: 123 DHAQDYAQIAQKDKLNELQLRIRQLLDQVDQITKEQNYQRYREERFRQTSESTNSRVFYW 182
Query: 618 SIFEASVLLVMTIGQVYYLK 677
SI + VL + Q+ +L+
Sbjct: 183 SIAQVVVLAITGAWQMRHLR 202
>Z68316-4|CAA92683.1| 234|Caenorhabditis elegans Hypothetical
protein K08E4.6 protein.
Length = 234
Score = 57.6 bits (133), Expect = 8e-09
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Frame = +3
Query: 141 LVSNAYSYTVTVDAHAEECFYENVE-ADTK-LGLSFEIAEGGFLDIDVIILGPDGNVIHK 314
++ Y +TV V A +CF++ V+ A K L + +++ +GG L+I+ +IL N++ +
Sbjct: 18 ILCGEYDFTVEVPAGKFQCFFQPVDLAKHKTLEVDYQVIDGGDLNINFMILH-GANILKQ 76
Query: 315 AERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMF---------NLEIGE--PQTKSG 461
+ + G + G Y CF N S + KVV F NL+ + ++
Sbjct: 77 DQLKVDGSHRIELNQPGDYQVCFDNSFSYQSRKVVFFEIFLFDAHGNLDEADLSAMARTD 136
Query: 462 NENEADHNKLEDMIKELATTLRTIKHD---QEYMQVRDRIH----RSINESTNSRVVMWS 620
++ A N+L I E IK++ EY Q R H R++ + RV WS
Sbjct: 137 SDLSAKMNELGVTIDEFHRRANGIKNNLNKVEYHQALLRAHEARDRAVMSANFDRVTFWS 196
Query: 621 IFEASVLLVMTIGQVYYLK 677
+ V++ + QV+ ++
Sbjct: 197 VVHTLVMVGVAGVQVFMIR 215
>Z74035-1|CAA98480.1| 204|Caenorhabditis elegans Hypothetical
protein F47G9.1 protein.
Length = 204
Score = 56.4 bits (130), Expect = 2e-08
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 6/191 (3%)
Frame = +3
Query: 123 VVTLLNLVSNAYSYTVTVDAHAEECFYENVEADTKLGLSFEIAEGGFLDIDVIILGPDGN 302
+V L+ + A+S V ++C E + + + +E ++G + + G+
Sbjct: 4 LVIFLSAIVLAHSLRFYVPPKEKKCLKEEIHKNVVVTGEYEFSQGIQYTGSIHVTDTRGH 63
Query: 303 VIHKAER--ESSGIYTFSAPTAGKYTYCFSNKMSSMTP---KVVMFNLEIGEPQTKSGNE 467
++K E + G + F+A + C N + P + V L+ G +
Sbjct: 64 TLYKRENFADLKGKFAFTADEYDIFEICIENHPPAGHPGEKREVSLILKHGVEAKNYDDI 123
Query: 468 NEADHNK-LEDMIKELATTLRTIKHDQEYMQVRDRIHRSINESTNSRVVMWSIFEASVLL 644
+A+ K LE ++ L +I D +M+ R+ R+ NESTNSRV+ SIF LL
Sbjct: 124 AKAEKLKPLEVELRRLEDMADSITKDFAFMRQREEEMRNTNESTNSRVLYLSIFSMLCLL 183
Query: 645 VMTIGQVYYLK 677
+ I QV +L+
Sbjct: 184 GLAIWQVLFLR 194
>AF100673-4|AAP13734.2| 438|Caenorhabditis elegans Hypothetical
protein Y66H1B.5 protein.
Length = 438
Score = 31.5 bits (68), Expect = 0.57
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Frame = +3
Query: 240 FEIAE-GGFLDIDVIILGPDGN--VIHKAERESSGIYTFSAPT--AGKYTYCFSNKMSSM 404
F++ + G I+ + GPDG + H E +GIY S PT AG+Y F +
Sbjct: 269 FDVRDCGNVKKIESRVFGPDGKERLNHVRSTEQNGIYDVSFPTDMAGEYCVVFYINGQEV 328
Query: 405 TPKVVMFNLEIGEPQ 449
+V + +IG +
Sbjct: 329 AARVPVMAEKIGRKE 343
>Z77665-8|CAB01224.2| 135|Caenorhabditis elegans Hypothetical
protein K02E11.7 protein.
Length = 135
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 494 GHDQRTCYYIKNYQTRSRVYAGA*SY 571
G +++TC Y +N QT+++V AG +Y
Sbjct: 72 GKNKKTCGYWENIQTKAKVVAGKTTY 97
>AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical
protein C35A11.4 protein.
Length = 515
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 545 LIVFDXXXXXSKFFDHVLKFIMVSFIFITRF 453
LI+F KF +HVL FI++ FI I F
Sbjct: 348 LIIFALMFTFYKFENHVLGFILICFICIFTF 378
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily assigned
gene nameprotein 278 protein.
Length = 1130
Score = 28.3 bits (60), Expect = 5.3
Identities = 38/148 (25%), Positives = 61/148 (41%), Gaps = 7/148 (4%)
Frame = +3
Query: 171 TVDAHAEECFYEN-VEADTKLGLSFEIAEGGFLDIDVIILGPDGNVIHKAERESSGIYTF 347
T+ A + N VE++TKL E E I D V+ KAER + + T
Sbjct: 780 TISAKTAQLLESNTVESETKLASVTEEREKEIQSFQTQISEKDNEVLTKAERINE-LETC 838
Query: 348 SAPTAGKYTYCFSNKMSSMTPK------VVMFNLEIGEPQTKSGNENEADHNKLEDMIKE 509
+ T K+ MT + VV+F+ I E +E EA N++ + +K
Sbjct: 839 LKEREVELT-GMRTKLDDMTQQLNEETTVVLFDNSIQE----KIDEKEATINEMNERLKS 893
Query: 510 LATTLRTIKHDQEYMQVRDRIHRSINES 593
+ + H++ YMQ R+ +S
Sbjct: 894 RENEIAKL-HEEMYMQKTQNEKRNEEQS 920
>AL021346-2|CAB63233.1| 419|Caenorhabditis elegans Hypothetical
protein H37A05.2 protein.
Length = 419
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 369 YTYCFSNKMSSMTPKVVMFNLEIGEPQTKSGNENEADHNKLEDMIKELAT 518
Y CF + M P ++ F++++GE N NE K+ +I++L T
Sbjct: 360 YELCFPASVILMLPFILSFSVKLGE------NINEESVEKMAGLIEDLVT 403
>Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical
protein F26D2.10 protein.
Length = 1213
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 483 NKLEDMIKELATTLRTIKHDQEYMQVRDRIH 575
+ ++D+IKEL TTL + E Q+RDR H
Sbjct: 446 SNVKDIIKELNTTLNFMTGSNE--QLRDRFH 474
>AY741200-1|AAU89102.1| 596|Caenorhabditis elegans STE20-like
serine/threonine kinase protein.
Length = 596
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 429 LEIGEPQTKSGNENEADHNKLEDMIKELATTLRTIKHDQEYMQVRDRIHRSI 584
L+I + + K+ + +A L+++ +AT LR + EY + +IHR I
Sbjct: 192 LDILKRKVKAIGKEQAQFGVLDEV--SIATVLREVLKGLEYFHLNGQIHRDI 241
>AL132898-15|CAC14417.2| 596|Caenorhabditis elegans Hypothetical
protein Y59A8B.23 protein.
Length = 596
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 429 LEIGEPQTKSGNENEADHNKLEDMIKELATTLRTIKHDQEYMQVRDRIHRSI 584
L+I + + K+ + +A L+++ +AT LR + EY + +IHR I
Sbjct: 192 LDILKRKVKAIGKEQAQFGVLDEV--SIATVLREVLKGLEYFHLNGQIHRDI 241
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,970,213
Number of Sequences: 27780
Number of extensions: 302611
Number of successful extensions: 770
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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