Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15m05
         (274 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z24725-1|CAA80852.1|  720|Homo sapiens mitogen inducible gene mi...    29   3.5  
BC017327-1|AAH17327.1|  680|Homo sapiens pleckstrin homology dom...    29   3.5  
AF443279-1|AAN75823.1|  680|Homo sapiens mitogen inducible 2 pro...    29   3.5  
AY426672-1|AAR88426.1|  213|Homo sapiens HBV PreS1-transactivate...    27   8.1  
AK128460-1|BAC87451.1|  213|Homo sapiens protein ( Homo sapiens ...    27   8.1  

>Z24725-1|CAA80852.1|  720|Homo sapiens mitogen inducible gene mig-2
           protein.
          Length = 720

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = +3

Query: 87  DPDPELMVDRITT-ITPIRRCLFISQYLK 170
           +PDP+L+ ++ITT ITP   CL   +YLK
Sbjct: 542 NPDPQLIPEQITTDITP--ECLVSPRYLK 568


>BC017327-1|AAH17327.1|  680|Homo sapiens pleckstrin homology domain
           containing, family C (with FERM domain) member 1
           protein.
          Length = 680

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = +3

Query: 87  DPDPELMVDRITT-ITPIRRCLFISQYLK 170
           +PDP+L+ ++ITT ITP   CL   +YLK
Sbjct: 502 NPDPQLIPEQITTDITP--ECLVSPRYLK 528


>AF443279-1|AAN75823.1|  680|Homo sapiens mitogen inducible 2
           protein.
          Length = 680

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = +3

Query: 87  DPDPELMVDRITT-ITPIRRCLFISQYLK 170
           +PDP+L+ ++ITT ITP   CL   +YLK
Sbjct: 502 NPDPQLIPEQITTDITP--ECLVSPRYLK 528


>AY426672-1|AAR88426.1|  213|Homo sapiens HBV PreS1-transactivated
           protein 1 protein.
          Length = 213

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 114 CLPLIPDRDPNWFFGCN*CFL 52
           CL L+PDR P+    C  C L
Sbjct: 25  CLALVPDRHPSQLSSCTLCLL 45


>AK128460-1|BAC87451.1|  213|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46603 fis, clone THYMU3047513. ).
          Length = 213

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 114 CLPLIPDRDPNWFFGCN*CFL 52
           CL L+PDR P+    C  C L
Sbjct: 25  CLALVPDRHPSQLSSCTLCLL 45


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,998,567
Number of Sequences: 237096
Number of extensions: 767857
Number of successful extensions: 971
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 76,859,062
effective HSP length: 68
effective length of database: 60,736,534
effective search space used: 1336203748
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)