Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15m05
(274 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110477-15|CAB54331.2| 295|Caenorhabditis elegans Hypothetical... 26 3.2
Z81117-5|CAB03321.1| 279|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z99771-1|CAB16919.2| 910|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z71259-9|CAA95795.1| 146|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z66511-8|CAA91319.2| 910|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z35598-7|CAA84650.2| 325|Caenorhabditis elegans Hypothetical pr... 25 7.3
U55370-2|AAA97994.1| 561|Caenorhabditis elegans Hypothetical pr... 25 7.3
AL021471-1|CAA16295.1| 241|Caenorhabditis elegans Hypothetical ... 25 7.3
AC006675-10|AAK84551.2| 280|Caenorhabditis elegans Serpentine r... 25 7.3
Z93394-7|CAD59169.1| 196|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z93394-6|CAB61034.1| 766|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z93394-5|CAB61035.1| 447|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z81047-1|CAB02827.1| 490|Caenorhabditis elegans Hypothetical pr... 25 9.7
AL117203-25|CAD59172.1| 196|Caenorhabditis elegans Hypothetical... 25 9.7
AL117203-24|CAB61043.1| 766|Caenorhabditis elegans Hypothetical... 25 9.7
AL117203-23|CAB61044.1| 447|Caenorhabditis elegans Hypothetical... 25 9.7
AF026211-2|AAB71294.1| 440|Caenorhabditis elegans Hypothetical ... 25 9.7
AF016422-8|AAW88392.1| 289|Caenorhabditis elegans Serpentine re... 25 9.7
AC024799-9|AAK72312.1| 293|Caenorhabditis elegans Hypothetical ... 25 9.7
>AL110477-15|CAB54331.2| 295|Caenorhabditis elegans Hypothetical
protein Y113G7B.9 protein.
Length = 295
Score = 26.2 bits (55), Expect = 3.2
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -1
Query: 178 KCYFRYWLINKHRLIGVIVV 119
+C+F YWLI + + +IV+
Sbjct: 167 QCFFHYWLIQRSIIFSLIVL 186
>Z81117-5|CAB03321.1| 279|Caenorhabditis elegans Hypothetical
protein T06E6.11 protein.
Length = 279
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 178 KCYFRYWLINKHRLIGVIVVILSTI 104
+CY+ +WL +H +IV++ +TI
Sbjct: 166 ECYYGFWLSFEHYSYVLIVILSATI 190
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical protein
T07D4.3 protein.
Length = 1301
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 116 SVYH*FRIGIRIGFSAAISAFCEKY 42
SV +R +++G SAA FCE+Y
Sbjct: 932 SVIQGYREAVQMGASAAEREFCERY 956
>Z99771-1|CAB16919.2| 910|Caenorhabditis elegans Hypothetical
protein D1043.1 protein.
Length = 910
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +3
Query: 42 IFFTKSTNCSRKTNSDPDPELMVDRITTITPI 137
++F CS +T D PE + +T++T +
Sbjct: 338 VYFASQVVCSPRTFEDDTPEFINSTMTSLTVV 369
>Z71259-9|CAA95795.1| 146|Caenorhabditis elegans Hypothetical
protein F13G3.9 protein.
Length = 146
Score = 25.0 bits (52), Expect = 7.3
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +3
Query: 15 KVRLVPENQIFFTKSTNCSRKTN---SDPDPELMVDRITTITPI 137
KV PE+QIF + N SR T +DP L V T +TPI
Sbjct: 27 KVMKRPESQIFVSLDMN-SRMTRGQLTDPLAVLDVTSSTVLTPI 69
>Z66511-8|CAA91319.2| 910|Caenorhabditis elegans Hypothetical
protein D1043.1 protein.
Length = 910
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +3
Query: 42 IFFTKSTNCSRKTNSDPDPELMVDRITTITPI 137
++F CS +T D PE + +T++T +
Sbjct: 338 VYFASQVVCSPRTFEDDTPEFINSTMTSLTVV 369
>Z35598-7|CAA84650.2| 325|Caenorhabditis elegans Hypothetical
protein F10F2.3 protein.
Length = 325
Score = 25.0 bits (52), Expect = 7.3
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 149 QTSPYWCNSSDSVY 108
QT P WCN+ D +Y
Sbjct: 212 QTVPAWCNALDGLY 225
>U55370-2|AAA97994.1| 561|Caenorhabditis elegans Hypothetical
protein K03B4.6 protein.
Length = 561
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 106 INSGSGSELVFRLQLVLFVKNI*FS 32
+ G + L+FRL ++LF K + FS
Sbjct: 46 VEGGFMAYLIFRLSMILFQKTVVFS 70
>AL021471-1|CAA16295.1| 241|Caenorhabditis elegans Hypothetical
protein Y17D7C.1 protein.
Length = 241
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +3
Query: 153 ISQYLK*HFICFCFKC--VDAPELCSVFNVMNYY*SNSY 263
+SQ++ HF+ FC +C V L ++ +Y +SY
Sbjct: 87 LSQHICRHFLLFCLQCRVVYGDFLLFFLIILTFYGQSSY 125
>AC006675-10|AAK84551.2| 280|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 57 protein.
Length = 280
Score = 25.0 bits (52), Expect = 7.3
Identities = 8/25 (32%), Positives = 19/25 (76%)
Frame = -1
Query: 178 KCYFRYWLINKHRLIGVIVVILSTI 104
+CY +YW++++ +++ ++ LSTI
Sbjct: 166 QCYLQYWMVHE-QVVFFVISSLSTI 189
>Z93394-7|CAD59169.1| 196|Caenorhabditis elegans Hypothetical
protein Y48E1C.1c protein.
Length = 196
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 21 RLVPENQIFFTKSTNCSRKTNSDPDP 98
RLVP+++ F S + N++PDP
Sbjct: 70 RLVPDDEEFENASVDSFDNFNAEPDP 95
>Z93394-6|CAB61034.1| 766|Caenorhabditis elegans Hypothetical
protein Y48E1C.1b protein.
Length = 766
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 21 RLVPENQIFFTKSTNCSRKTNSDPDP 98
RLVP+++ F S + N++PDP
Sbjct: 640 RLVPDDEEFENASVDSFDNFNAEPDP 665
>Z93394-5|CAB61035.1| 447|Caenorhabditis elegans Hypothetical
protein Y48E1C.1a protein.
Length = 447
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 21 RLVPENQIFFTKSTNCSRKTNSDPDP 98
RLVP+++ F S + N++PDP
Sbjct: 321 RLVPDDEEFENASVDSFDNFNAEPDP 346
>Z81047-1|CAB02827.1| 490|Caenorhabditis elegans Hypothetical
protein C41G6.1 protein.
Length = 490
Score = 24.6 bits (51), Expect = 9.7
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -1
Query: 232 LKTEHNSGASTHLKQKQIKCYFRYWLINKHRLIGVIVVILSTI 104
L T N G ++ + +I +RY L+ R GVI V +T+
Sbjct: 129 LTTLRNFGLGKNIMEDRIMDEYRYRLLKNSRKNGVIEVNAATM 171
>AL117203-25|CAD59172.1| 196|Caenorhabditis elegans Hypothetical
protein Y48E1C.1c protein.
Length = 196
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 21 RLVPENQIFFTKSTNCSRKTNSDPDP 98
RLVP+++ F S + N++PDP
Sbjct: 70 RLVPDDEEFENASVDSFDNFNAEPDP 95
>AL117203-24|CAB61043.1| 766|Caenorhabditis elegans Hypothetical
protein Y48E1C.1b protein.
Length = 766
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 21 RLVPENQIFFTKSTNCSRKTNSDPDP 98
RLVP+++ F S + N++PDP
Sbjct: 640 RLVPDDEEFENASVDSFDNFNAEPDP 665
>AL117203-23|CAB61044.1| 447|Caenorhabditis elegans Hypothetical
protein Y48E1C.1a protein.
Length = 447
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 21 RLVPENQIFFTKSTNCSRKTNSDPDP 98
RLVP+++ F S + N++PDP
Sbjct: 321 RLVPDDEEFENASVDSFDNFNAEPDP 346
>AF026211-2|AAB71294.1| 440|Caenorhabditis elegans Hypothetical
protein T13B5.3 protein.
Length = 440
Score = 24.6 bits (51), Expect = 9.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 10 GEKCAWFPKIKYFSQKA 60
GE C+W K+KY + A
Sbjct: 312 GEDCSWIGKLKYHAYSA 328
>AF016422-8|AAW88392.1| 289|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 60 protein.
Length = 289
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -1
Query: 199 HLKQKQIKCYFRYWL 155
HL KCYF YWL
Sbjct: 159 HLGCTVSKCYFEYWL 173
>AC024799-9|AAK72312.1| 293|Caenorhabditis elegans Hypothetical
protein Y49C4A.1 protein.
Length = 293
Score = 24.6 bits (51), Expect = 9.7
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = -1
Query: 178 KCYFRYWLINKHRLIGVIVV 119
KC+F++W +++ + V+VV
Sbjct: 167 KCFFKFWSMHRGIIFSVMVV 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,599,968
Number of Sequences: 27780
Number of extensions: 124531
Number of successful extensions: 315
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 315
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 227290938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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