Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15l13
(637 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL833875-1|CAD38732.1| 801|Homo sapiens hypothetical protein pr... 59 1e-08
AC006530-6|AAD30184.1| 391|Homo sapiens hypothetical protein pr... 59 1e-08
AB039667-1|BAA92353.1| 1453|Homo sapiens DNA mismatch repair pro... 59 1e-08
L40399-1|AAC42005.1| 265|Homo sapiens protein ( Homo sapiens (c... 40 0.007
AY639646-1|AAX19141.1| 572|Homo sapiens prefoldin subunit 6-lik... 31 4.5
AL445669-8|CAH70752.1| 783|Homo sapiens novel protein protein. 31 4.5
AL138788-1|CAI22439.1| 783|Homo sapiens novel protein protein. 31 4.5
X53587-1|CAA37656.1| 1822|Homo sapiens integrin beta 4 protein p... 30 6.0
X52186-1|CAA36433.1| 1805|Homo sapiens integrin beta 4 subunit p... 30 6.0
X51841-1|CAA36134.1| 1752|Homo sapiens protein ( Human mRNA for ... 30 6.0
U66541-3|AAC51632.1| 1752|Homo sapiens beta4-integrin protein. 30 6.0
U66541-2|AAC51634.1| 1805|Homo sapiens beta4-integrin protein. 30 6.0
U66541-1|AAC51633.1| 1822|Homo sapiens beta4-integrin protein. 30 6.0
BC126411-1|AAI26412.1| 1752|Homo sapiens integrin, beta 4 protein. 30 6.0
BC118916-1|AAI18917.1| 1752|Homo sapiens ITGB4 protein protein. 30 6.0
BC112167-1|AAI12168.1| 1429|Homo sapiens mutL homolog 3 (E. coli... 30 6.0
BC109238-1|AAI09239.1| 644|Homo sapiens ITGB4 protein protein. 30 6.0
BC036866-1|AAH36866.1| 335|Homo sapiens MLH3 protein protein. 30 6.0
AY963685-1|AAX59030.1| 1429|Homo sapiens mutL 3 homolog (E.coli)... 30 6.0
AJ251004-1|CAB61345.1| 1873|Homo sapiens integrin beta 4 protein. 30 6.0
AF195658-1|AAF23905.1| 1429|Homo sapiens DNA mismatch repair pro... 30 6.0
AF195657-1|AAF23904.1| 1429|Homo sapiens DNA mismatch repair pro... 30 6.0
AF011375-1|AAB65421.1| 964|Homo sapiens integrin variant beta4E... 30 6.0
AC007055-1|AAD31936.1| 160|Homo sapiens protein ( Homo sapiens ... 30 6.0
AB208913-1|BAD92150.1| 1515|Homo sapiens integrin beta 4 isoform... 30 6.0
>AL833875-1|CAD38732.1| 801|Homo sapiens hypothetical protein
protein.
Length = 801
Score = 58.8 bits (136), Expect = 1e-08
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Frame = +2
Query: 182 EKLTKKIDKENTSLKFDAQSIKSAKVLGQVDYKFIAAIVNGKNYNKKEAVESL-VLFDQH 358
E L KI +F I S +VL QVD KFIA +++ K EA +L VL DQH
Sbjct: 514 ESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGNLLVLVDQH 573
Query: 359 AVDERIRLEKNLSEYLQKQQ-----WKKV----NIDDVHLTLNKDEILYLHNYKDKLSRL 511
A ERIRLE+ + + +KQQ KK+ I + +T+ +++ L Y L L
Sbjct: 574 AAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCYHKNLEDL 633
Query: 512 GIEWNI--LGNDQIILSSVPQSILGKIPRQMEKVVEAVKKIIAE 637
G+E+ + +++ VP + + ++ + V K I E
Sbjct: 634 GLEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVE 677
>AC006530-6|AAD30184.1| 391|Homo sapiens hypothetical protein
protein.
Length = 391
Score = 58.8 bits (136), Expect = 1e-08
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Frame = +2
Query: 182 EKLTKKIDKENTSLKFDAQSIKSAKVLGQVDYKFIAAIVNGKNYNKKEAVESL-VLFDQH 358
E L KI +F I S +VL QVD KFIA +++ K EA +L VL DQH
Sbjct: 112 ESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGNLLVLVDQH 171
Query: 359 AVDERIRLEKNLSEYLQKQQ-----WKKV----NIDDVHLTLNKDEILYLHNYKDKLSRL 511
A ERIRLE+ + + +KQQ KK+ I + +T+ +++ L Y L L
Sbjct: 172 AAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCYHKNLEDL 231
Query: 512 GIEWNI--LGNDQIILSSVPQSILGKIPRQMEKVVEAVKKIIAE 637
G+E+ + +++ VP + + ++ + V K I E
Sbjct: 232 GLEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVE 275
>AB039667-1|BAA92353.1| 1453|Homo sapiens DNA mismatch repair protein
MLH3 protein.
Length = 1453
Score = 58.8 bits (136), Expect = 1e-08
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Frame = +2
Query: 182 EKLTKKIDKENTSLKFDAQSIKSAKVLGQVDYKFIAAIVNGKNYNKKEAVESL-VLFDQH 358
E L KI +F I S +VL QVD KFIA +++ K EA +L VL DQH
Sbjct: 1166 ESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGNLLVLVDQH 1225
Query: 359 AVDERIRLEKNLSEYLQKQQ-----WKKV----NIDDVHLTLNKDEILYLHNYKDKLSRL 511
A ERIRLE+ + + +KQQ KK+ I + +T+ +++ L Y L L
Sbjct: 1226 AAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCYHKNLEDL 1285
Query: 512 GIEWNI--LGNDQIILSSVPQSILGKIPRQMEKVVEAVKKIIAE 637
G+E+ + +++ VP + + ++ + V K I E
Sbjct: 1286 GLEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVE 1329
>L40399-1|AAC42005.1| 265|Homo sapiens protein ( Homo sapiens
(clone S240ii117/zap112) mRNA, complete cds. ).
Length = 265
Score = 39.9 bits (89), Expect = 0.007
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 12/140 (8%)
Frame = +2
Query: 254 KVLGQVDYKFIAAIVNGKNYNKKEAVESL-VLFDQHAVDERIRLEKNLSEYLQKQQ---- 418
+VL QVD + ++ K EA +L VL QHA ER RLE+ + + +KQQ
Sbjct: 2 QVLQQVDTSLLPVWMSTKTEENGEAGGNLLVLVXQHAAHERXRLEQXIIDSYEKQQAQGS 61
Query: 419 -WKKV----NIDDVHLTLNKDEILYLHNYKDKLSRLGIEWNI--LGNDQIILSSVPQSIL 577
KK+ I + +T+ +++ L Y L LG+E+ + +++ VP +
Sbjct: 62 GRKKLLSSTLIPPLEITVTEEQRRLLWCYHKNLEDLGLEFVFPDTSDSLVLVGKVPLCFV 121
Query: 578 GKIPRQMEKVVEAVKKIIAE 637
+ ++ + V K I E
Sbjct: 122 EREANELRRGRSTVTKSIVE 141
>AY639646-1|AAX19141.1| 572|Homo sapiens prefoldin subunit 6-like
protein protein.
Length = 572
Score = 30.7 bits (66), Expect = 4.5
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +2
Query: 317 KKEAVESLVLFDQHAVDERIRLEKNLSEYLQKQQWKKVNIDDVHLTLNKDEILYLHNYKD 496
++EA+ + ++ DE ++ + LSE L K Q +K + + +L L K +++ NY +
Sbjct: 233 QQEALLKQLENEKRKYDEHVKSNQELSEKLSKLQQEKEALREEYLRLLKLLNVHVRNYNE 292
Query: 497 K 499
K
Sbjct: 293 K 293
>AL445669-8|CAH70752.1| 783|Homo sapiens novel protein protein.
Length = 783
Score = 30.7 bits (66), Expect = 4.5
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +2
Query: 317 KKEAVESLVLFDQHAVDERIRLEKNLSEYLQKQQWKKVNIDDVHLTLNKDEILYLHNYKD 496
++EA+ + ++ DE ++ + LSE L K Q +K + + +L L K +++ NY +
Sbjct: 444 QQEALLKQLENEKRKYDEHVKSNQELSEKLSKLQQEKEALREEYLRLLKLLNVHVRNYNE 503
Query: 497 K 499
K
Sbjct: 504 K 504
>AL138788-1|CAI22439.1| 783|Homo sapiens novel protein protein.
Length = 783
Score = 30.7 bits (66), Expect = 4.5
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +2
Query: 317 KKEAVESLVLFDQHAVDERIRLEKNLSEYLQKQQWKKVNIDDVHLTLNKDEILYLHNYKD 496
++EA+ + ++ DE ++ + LSE L K Q +K + + +L L K +++ NY +
Sbjct: 444 QQEALLKQLENEKRKYDEHVKSNQELSEKLSKLQQEKEALREEYLRLLKLLNVHVRNYNE 503
Query: 497 K 499
K
Sbjct: 504 K 504
>X53587-1|CAA37656.1| 1822|Homo sapiens integrin beta 4 protein
protein.
Length = 1822
Score = 30.3 bits (65), Expect = 6.0
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 77 FENNLYDDFDNNVQMNSNMFDPILQEVWNNATTGIEKLTKKIDKENTSLK 226
F N++ DD DN +M N+ +L ++ ++ T G K K+ T ++
Sbjct: 138 FSNSMSDDLDNLKKMGQNL-ARVLSQLTSDYTIGFGKFVDKVSVPQTDMR 186
>X52186-1|CAA36433.1| 1805|Homo sapiens integrin beta 4 subunit
protein.
Length = 1805
Score = 30.3 bits (65), Expect = 6.0
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 77 FENNLYDDFDNNVQMNSNMFDPILQEVWNNATTGIEKLTKKIDKENTSLK 226
F N++ DD DN +M N+ +L ++ ++ T G K K+ T ++
Sbjct: 138 FSNSMSDDLDNLKKMGQNL-ARVLSQLTSDYTIGFGKFVDKVSVPQTDMR 186
>X51841-1|CAA36134.1| 1752|Homo sapiens protein ( Human mRNA for
integrin beta(4)subunit. ).
Length = 1752
Score = 30.3 bits (65), Expect = 6.0
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 77 FENNLYDDFDNNVQMNSNMFDPILQEVWNNATTGIEKLTKKIDKENTSLK 226
F N++ DD DN +M N+ +L ++ ++ T G K K+ T ++
Sbjct: 138 FSNSMSDDLDNLKKMGQNL-ARVLSQLTSDYTIGFGKFVDKVSVPQTDMR 186
>U66541-3|AAC51632.1| 1752|Homo sapiens beta4-integrin protein.
Length = 1752
Score = 30.3 bits (65), Expect = 6.0
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 77 FENNLYDDFDNNVQMNSNMFDPILQEVWNNATTGIEKLTKKIDKENTSLK 226
F N++ DD DN +M N+ +L ++ ++ T G K K+ T ++
Sbjct: 138 FSNSMSDDLDNLKKMGQNL-ARVLSQLTSDYTIGFGKFVDKVSVPQTDMR 186
>U66541-2|AAC51634.1| 1805|Homo sapiens beta4-integrin protein.
Length = 1805
Score = 30.3 bits (65), Expect = 6.0
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 77 FENNLYDDFDNNVQMNSNMFDPILQEVWNNATTGIEKLTKKIDKENTSLK 226
F N++ DD DN +M N+ +L ++ ++ T G K K+ T ++
Sbjct: 138 FSNSMSDDLDNLKKMGQNL-ARVLSQLTSDYTIGFGKFVDKVSVPQTDMR 186
>U66541-1|AAC51633.1| 1822|Homo sapiens beta4-integrin protein.
Length = 1822
Score = 30.3 bits (65), Expect = 6.0
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 77 FENNLYDDFDNNVQMNSNMFDPILQEVWNNATTGIEKLTKKIDKENTSLK 226
F N++ DD DN +M N+ +L ++ ++ T G K K+ T ++
Sbjct: 138 FSNSMSDDLDNLKKMGQNL-ARVLSQLTSDYTIGFGKFVDKVSVPQTDMR 186
>BC126411-1|AAI26412.1| 1752|Homo sapiens integrin, beta 4 protein.
Length = 1752
Score = 30.3 bits (65), Expect = 6.0
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 77 FENNLYDDFDNNVQMNSNMFDPILQEVWNNATTGIEKLTKKIDKENTSLK 226
F N++ DD DN +M N+ +L ++ ++ T G K K+ T ++
Sbjct: 138 FSNSMSDDLDNLKKMGQNL-ARVLSQLTSDYTIGFGKFVDKVSVPQTDMR 186
>BC118916-1|AAI18917.1| 1752|Homo sapiens ITGB4 protein protein.
Length = 1752
Score = 30.3 bits (65), Expect = 6.0
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 77 FENNLYDDFDNNVQMNSNMFDPILQEVWNNATTGIEKLTKKIDKENTSLK 226
F N++ DD DN +M N+ +L ++ ++ T G K K+ T ++
Sbjct: 138 FSNSMSDDLDNLKKMGQNL-ARVLSQLTSDYTIGFGKFVDKVSVPQTDMR 186
>BC112167-1|AAI12168.1| 1429|Homo sapiens mutL homolog 3 (E. coli)
protein.
Length = 1429
Score = 30.3 bits (65), Expect = 6.0
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +2
Query: 182 EKLTKKIDKENTSLKFDAQSIKSAKVLGQVDYKFIAAIVNGKNYNKKEA 328
E L KI +F I S +VL QVD KFIA +++ K EA
Sbjct: 1166 ESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEA 1214
>BC109238-1|AAI09239.1| 644|Homo sapiens ITGB4 protein protein.
Length = 644
Score = 30.3 bits (65), Expect = 6.0
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 77 FENNLYDDFDNNVQMNSNMFDPILQEVWNNATTGIEKLTKKIDKENTSLK 226
F N++ DD DN +M N+ +L ++ ++ T G K K+ T ++
Sbjct: 55 FSNSMSDDLDNLKKMGQNL-ARVLSQLTSDYTIGFGKFVDKVSVPQTDMR 103
>BC036866-1|AAH36866.1| 335|Homo sapiens MLH3 protein protein.
Length = 335
Score = 30.3 bits (65), Expect = 6.0
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +2
Query: 182 EKLTKKIDKENTSLKFDAQSIKSAKVLGQVDYKFIAAIVNGKNYNKKEA 328
E L KI +F I S +VL QVD KFIA +++ K EA
Sbjct: 72 ESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEA 120
>AY963685-1|AAX59030.1| 1429|Homo sapiens mutL 3 homolog (E.coli)
protein.
Length = 1429
Score = 30.3 bits (65), Expect = 6.0
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +2
Query: 182 EKLTKKIDKENTSLKFDAQSIKSAKVLGQVDYKFIAAIVNGKNYNKKEA 328
E L KI +F I S +VL QVD KFIA +++ K EA
Sbjct: 1166 ESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEA 1214
>AJ251004-1|CAB61345.1| 1873|Homo sapiens integrin beta 4 protein.
Length = 1873
Score = 30.3 bits (65), Expect = 6.0
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 77 FENNLYDDFDNNVQMNSNMFDPILQEVWNNATTGIEKLTKKIDKENTSLK 226
F N++ DD DN +M N+ +L ++ ++ T G K K+ T ++
Sbjct: 137 FSNSMSDDLDNLKKMGQNL-ARVLSQLTSDYTIGFGKFVDKVSVPQTDMR 185
>AF195658-1|AAF23905.1| 1429|Homo sapiens DNA mismatch repair protein
protein.
Length = 1429
Score = 30.3 bits (65), Expect = 6.0
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +2
Query: 182 EKLTKKIDKENTSLKFDAQSIKSAKVLGQVDYKFIAAIVNGKNYNKKEA 328
E L KI +F I S +VL QVD KFIA +++ K EA
Sbjct: 1166 ESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEA 1214
>AF195657-1|AAF23904.1| 1429|Homo sapiens DNA mismatch repair protein
protein.
Length = 1429
Score = 30.3 bits (65), Expect = 6.0
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +2
Query: 182 EKLTKKIDKENTSLKFDAQSIKSAKVLGQVDYKFIAAIVNGKNYNKKEA 328
E L KI +F I S +VL QVD KFIA +++ K EA
Sbjct: 1166 ESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEA 1214
>AF011375-1|AAB65421.1| 964|Homo sapiens integrin variant beta4E
protein.
Length = 964
Score = 30.3 bits (65), Expect = 6.0
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 77 FENNLYDDFDNNVQMNSNMFDPILQEVWNNATTGIEKLTKKIDKENTSLK 226
F N++ DD DN +M N+ +L ++ ++ T G K K+ T ++
Sbjct: 138 FSNSMSDDLDNLKKMGQNL-ARVLSQLTSDYTIGFGKFVDKVSVPQTDMR 186
>AC007055-1|AAD31936.1| 160|Homo sapiens protein ( Homo sapiens
chromosome 14 clone BAC 201F1 map 14q24.3, complete
sequence. ).
Length = 160
Score = 30.3 bits (65), Expect = 6.0
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +2
Query: 182 EKLTKKIDKENTSLKFDAQSIKSAKVLGQVDYKFIAAIVNGKNYNKKEA 328
E L KI +F I S +VL QVD KFIA +++ K EA
Sbjct: 112 ESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEA 160
>AB208913-1|BAD92150.1| 1515|Homo sapiens integrin beta 4 isoform 3
precursor variant protein.
Length = 1515
Score = 30.3 bits (65), Expect = 6.0
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 77 FENNLYDDFDNNVQMNSNMFDPILQEVWNNATTGIEKLTKKIDKENTSLK 226
F N++ DD DN +M N+ +L ++ ++ T G K K+ T ++
Sbjct: 170 FSNSMSDDLDNLKKMGQNL-ARVLSQLTSDYTIGFGKFVDKVSVPQTDMR 218
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,547,390
Number of Sequences: 237096
Number of extensions: 1459667
Number of successful extensions: 3478
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3469
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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