Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15l11
(657 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein Urb1|Schi... 28 1.0
SPBC543.08 |||phosphoinositide biosynthesis protein |Schizosacch... 27 3.1
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 27 3.1
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 26 4.2
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 4.2
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 26 5.5
SPBC1773.07c |sbp1|yrb1|Ran GTPase binding protein Sbp1|Schizosa... 26 5.5
SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomy... 26 5.5
SPAC4H3.05 |srs2||ATP-dependent DNA helicase, UvrD subfamily|Sch... 25 7.3
SPBC119.13c |prp31||U4/U6 x U5 tri-snRNP complex subunit Prp31|S... 25 9.6
SPCC16A11.06c |gpi10||pig-B|Schizosaccharomyces pombe|chr 3|||Ma... 25 9.6
>SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein
Urb1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1568
Score = 28.3 bits (60), Expect = 1.0
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 77 PSDWESICHRIWSDMTPTHALANNYHRRVQNASHHH 184
PS+WE I +++ D+ T L ++Y N +H
Sbjct: 1296 PSEWEKIDLKVFDDLETTEGLLSSYCSNEWNREVYH 1331
>SPBC543.08 |||phosphoinositide biosynthesis protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 250
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = -1
Query: 192 LRVWWWLAFWTRR-W*LFARACVGVISDHIRWQIL 91
L +WWW+ F T + C G S + W I+
Sbjct: 197 LGLWWWMLFVTASFYHTTFEKCTGFFSGILEWSIV 231
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 3.1
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = +2
Query: 35 LHAAS*YQPPHSVEPSD---WESICHRIWSDMTPTHAL 139
+H+ S S+EPS E CH SDM PTH L
Sbjct: 193 IHSLSNPSTASSLEPSSPLGSEDECHPPTSDMQPTHEL 230
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 26.2 bits (55), Expect = 4.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 123 LQHMLWQTTTTAVSRMQATTTPEVPWSGPSGP 218
+ +L QTTTT + Q TP+V S P P
Sbjct: 328 IMSLLRQTTTTPFAGNQVMPTPQVQGSRPPPP 359
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.2 bits (55), Expect = 4.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 286 SATIRSCNNAAQFAKKNTQSTTSKIPSSSML 378
SA S +++ A +T STTS P+SS L
Sbjct: 79 SAASSSLTSSSSLASSSTNSTTSASPTSSSL 109
>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1400
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 329 KKTRSLQRRKFHLVVCLKCVIHIRAVTQPTLD 424
K T++L + HL+ C KC + I + LD
Sbjct: 208 KLTKALAAQHLHLLSCQKCPLSIHPLCNRILD 239
>SPBC1773.07c |sbp1|yrb1|Ran GTPase binding protein
Sbp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 215
Score = 25.8 bits (54), Expect = 5.5
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 299 DPAIMLHNLRKKTRSLQRRKFHLVVCLKCVIHIRAVTQPTLDADRVATTWGVA 457
D ++ H KTR + RR L VC ++ P + +DR + W VA
Sbjct: 120 DARLLKHKETGKTRLVMRRDKTLKVCANHLLMPEMKLTPNVGSDR-SWVWTVA 171
>SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 537
Score = 25.8 bits (54), Expect = 5.5
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 356 FDVVDCVFFFANCAALL 306
F +V CVFF +CA L+
Sbjct: 199 FPIVQCVFFTLHCAVLI 215
>SPAC4H3.05 |srs2||ATP-dependent DNA helicase, UvrD
subfamily|Schizosaccharomyces pombe|chr 1|||Manual
Length = 887
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -2
Query: 416 LVVSQPLCVSHILSILLDGIFDVVDCVFFFANCAALLQDRIVADG 282
L+ QP CV +I IL+D D +F AL I G
Sbjct: 221 LLQKQPDCVRNIKHILIDEFQDTSKIQYFLVKLLALQNSDITIVG 265
>SPBC119.13c |prp31||U4/U6 x U5 tri-snRNP complex subunit
Prp31|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 25.0 bits (52), Expect = 9.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 43 SIMIPATTFRRTIRLGKYLPSYMVRYDSNTCSGKQ 147
++M+ ATT T+ GK LP M++ N C Q
Sbjct: 187 TVMVIATTATTTV--GKPLPDEMIKNVKNCCEAIQ 219
>SPCC16A11.06c |gpi10||pig-B|Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 25.0 bits (52), Expect = 9.6
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 192 LRVWWWLAFWTRRW 151
+R+W+WLA RW
Sbjct: 1 MRIWFWLAILVFRW 14
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.126 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,739,099
Number of Sequences: 5004
Number of extensions: 54760
Number of successful extensions: 139
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 297805304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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