Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15l03
         (688 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   2.1  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    23   2.1  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    23   2.1  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    23   2.1  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    23   2.1  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    22   6.3  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    22   6.3  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    22   6.3  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    22   6.3  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 16/65 (24%), Positives = 29/65 (44%)
 Frame = +2

Query: 272 ITILYKYDLAAEDYHTLCIKASARRQCVINIDVLYANRLPMIPQAKKDDLMSMCKSQIIP 451
           +++LY+  L A+DY T    A+  R  V     L A    ++ +     ++     +I+P
Sbjct: 104 VSLLYRILLGAKDYQTFLKTAAWARVHVNEGQFLKAFVAAVLTRQDTQSVIFPPVYEILP 163

Query: 452 SAHYD 466
             H D
Sbjct: 164 QHHLD 168


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -2

Query: 645 KIQSILF*NNIY*TFQYKKLKEINKNY 565
           KI S L  N I+    YKKL+  N NY
Sbjct: 302 KIISSLLNNTIHNNNNYKKLQYYNINY 328


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -2

Query: 645 KIQSILF*NNIY*TFQYKKLKEINKNY 565
           KI S L  N I+    YKKL+  N NY
Sbjct: 313 KIISSLLNNTIHNNNNYKKLQYYNINY 339


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -2

Query: 645 KIQSILF*NNIY*TFQYKKLKEINKNY 565
           KI S L  N I+    YKKL+  N NY
Sbjct: 313 KIISSLLNNTIHNNNNYKKLQYYNINY 339


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -2

Query: 645 KIQSILF*NNIY*TFQYKKLKEINKNY 565
           KI S L  N I+    YKKL+  N NY
Sbjct: 302 KIISSLLNNTIHNNNNYKKLQYYNINY 328


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 621 NNIY*TFQYKKLKEINKNY 565
           NN Y    YKKL+  N NY
Sbjct: 99  NNNYNNNNYKKLQYYNINY 117


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 621 NNIY*TFQYKKLKEINKNY 565
           NN Y    YKKL+  N NY
Sbjct: 99  NNNYNNNNYKKLQYYNINY 117


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 621 NNIY*TFQYKKLKEINKNY 565
           NN Y    YKKL+  N NY
Sbjct: 99  NNNYNNNNYKKLQYYNINY 117


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 621 NNIY*TFQYKKLKEINKNY 565
           NN Y    YKKL+  N NY
Sbjct: 99  NNNYNNNNYKKLQYYNINY 117


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,163
Number of Sequences: 438
Number of extensions: 3890
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)