Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15l01
         (703 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73903-1|CAA98108.1|  759|Homo sapiens TRPC1A protein protein.         30   9.2  
X89066-1|CAA61447.1|  759|Homo sapiens TRPC1 protein protein.          30   9.2  
U31110-2|AAA93252.1|  759|Homo sapiens alternatively spliced trp...    30   9.2  
U31110-1|AAA93251.1|  793|Homo sapiens unspliced trp-1 protein p...    30   9.2  
BC113953-1|AAI13954.1|  759|Homo sapiens TRPC1 protein protein.        30   9.2  
BC112338-1|AAI12339.1|  759|Homo sapiens TRPC1 protein protein.        30   9.2  

>Z73903-1|CAA98108.1|  759|Homo sapiens TRPC1A protein protein.
          Length = 759

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -3

Query: 422 VAKSSLKSKFNKKRFISDHDCRPFLNKV 339
           +++  L  K+N+K F+S  +C+ FLN V
Sbjct: 273 LSRLKLAIKYNQKEFVSQSNCQQFLNTV 300


>X89066-1|CAA61447.1|  759|Homo sapiens TRPC1 protein protein.
          Length = 759

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -3

Query: 422 VAKSSLKSKFNKKRFISDHDCRPFLNKV 339
           +++  L  K+N+K F+S  +C+ FLN V
Sbjct: 273 LSRLKLAIKYNQKEFVSQSNCQQFLNTV 300


>U31110-2|AAA93252.1|  759|Homo sapiens alternatively spliced trp-1
           protein protein.
          Length = 759

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -3

Query: 422 VAKSSLKSKFNKKRFISDHDCRPFLNKV 339
           +++  L  K+N+K F+S  +C+ FLN V
Sbjct: 273 LSRLKLAIKYNQKEFVSQSNCQQFLNTV 300


>U31110-1|AAA93251.1|  793|Homo sapiens unspliced trp-1 protein
           protein.
          Length = 793

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -3

Query: 422 VAKSSLKSKFNKKRFISDHDCRPFLNKV 339
           +++  L  K+N+K F+S  +C+ FLN V
Sbjct: 307 LSRLKLAIKYNQKEFVSQSNCQQFLNTV 334


>BC113953-1|AAI13954.1|  759|Homo sapiens TRPC1 protein protein.
          Length = 759

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -3

Query: 422 VAKSSLKSKFNKKRFISDHDCRPFLNKV 339
           +++  L  K+N+K F+S  +C+ FLN V
Sbjct: 273 LSRLKLAIKYNQKEFVSQSNCQQFLNTV 300


>BC112338-1|AAI12339.1|  759|Homo sapiens TRPC1 protein protein.
          Length = 759

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -3

Query: 422 VAKSSLKSKFNKKRFISDHDCRPFLNKV 339
           +++  L  K+N+K F+S  +C+ FLN V
Sbjct: 273 LSRLKLAIKYNQKEFVSQSNCQQFLNTV 300


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,808,256
Number of Sequences: 237096
Number of extensions: 1497040
Number of successful extensions: 2436
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2436
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)