Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15l01
         (703 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37092-8|CAA85460.2|  327|Caenorhabditis elegans Hypothetical pr...    31   0.80 
AY037792-1|AAK94756.1|  327|Caenorhabditis elegans SRA-12 protein.     31   0.80 
AC006625-10|AAK68271.1|  325|Caenorhabditis elegans Hypothetical...    30   1.8  
Z81139-5|CAB03481.2|  359|Caenorhabditis elegans Hypothetical pr...    29   4.3  
EF473216-1|ABQ42568.1|  262|Caenorhabditis elegans endoplasmic r...    28   5.6  
AF039719-9|AAB96749.3|  262|Caenorhabditis elegans Hypothetical ...    28   5.6  
AF038604-2|AAB92013.1|  468|Caenorhabditis elegans Hypothetical ...    28   5.6  

>Z37092-8|CAA85460.2|  327|Caenorhabditis elegans Hypothetical
           protein F44F4.7 protein.
          Length = 327

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 320 LSRNSRNLADTITANVIIFTYFPIYA*IIKASILLLKCW 204
           + +N  N+   I  NVI++ Y P YA +  A ++L   W
Sbjct: 256 MRKNRENIPTLIYFNVIVWVYAPPYACVSLAPLILFSLW 294


>AY037792-1|AAK94756.1|  327|Caenorhabditis elegans SRA-12 protein.
          Length = 327

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 320 LSRNSRNLADTITANVIIFTYFPIYA*IIKASILLLKCW 204
           + +N  N+   I  NVI++ Y P YA +  A ++L   W
Sbjct: 256 MRKNRENIPTLIYFNVIVWVYAPPYACVSLAPLILFSLW 294


>AC006625-10|AAK68271.1|  325|Caenorhabditis elegans Hypothetical
           protein C55B7.11 protein.
          Length = 325

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +1

Query: 148 TETENSRLGCILQALN*HHQHFNSNIEAFMIQAYIGKYV 264
           T T N  L CILQ+L   + HFN   E + I+  I  YV
Sbjct: 100 TNTANDVLACILQSLRSFNVHFN---EVYAIRTAIFNYV 135


>Z81139-5|CAB03481.2|  359|Caenorhabditis elegans Hypothetical
           protein W05H5.6 protein.
          Length = 359

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 40  CLHYENIKLHVKLLVKLMSRN 102
           C+H  N+ LHV L ++L  RN
Sbjct: 42  CIHLVNVSLHVALKIRLFHRN 62


>EF473216-1|ABQ42568.1|  262|Caenorhabditis elegans endoplasmic
           reticulum-like protein protein.
          Length = 262

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = -1

Query: 445 CYRTDS*QSQKVASNL 398
           CYRTDS  SQKV +NL
Sbjct: 25  CYRTDSASSQKVINNL 40


>AF039719-9|AAB96749.3|  262|Caenorhabditis elegans Hypothetical
           protein K04F10.3 protein.
          Length = 262

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = -1

Query: 445 CYRTDS*QSQKVASNL 398
           CYRTDS  SQKV +NL
Sbjct: 25  CYRTDSASSQKVINNL 40


>AF038604-2|AAB92013.1|  468|Caenorhabditis elegans Hypothetical
           protein B0546.3 protein.
          Length = 468

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +1

Query: 532 PVLERIQSVGRRIVNPLCGSQFVDQLSGTRQFDDFVEPGYINF 660
           PVL+    VG R   P   +QF  Q  G  Q   F +PG++ F
Sbjct: 254 PVLQMAPGVGVRF--PQLPAQFQPQFGGRVQAHLFPQPGFVQF 294


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,851,283
Number of Sequences: 27780
Number of extensions: 253516
Number of successful extensions: 576
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)