Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15k21
         (624 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC16E8.07c |vph1||V-type ATPase subunit a|Schizosaccharomyces ...    29   0.55 
SPBC31F10.16 |||ChAPs family protein|Schizosaccharomyces pombe|c...    27   1.7  
SPCC794.06 |||TDT malic acid transporter|Schizosaccharomyces pom...    27   2.9  
SPAC8E11.08c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual       26   3.8  
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos...    26   5.1  
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc...    25   6.7  
SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr 1|||...    25   6.7  
SPAC14C4.04 |B22918-2||hypothetical protein|Schizosaccharomyces ...    25   8.9  
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos...    25   8.9  

>SPAC16E8.07c |vph1||V-type ATPase subunit a|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 805

 Score = 29.1 bits (62), Expect = 0.55
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +2

Query: 107 MALYSFVCFSLLLTVSAEFQWKHHNNEELPLVLQEVHNNCPNITRIYAL 253
           + + + +C   LL V     W+ H+NEE     Q ++++ PN+    AL
Sbjct: 625 LVIAALICVPWLLIVKPFVLWRRHSNEENK--YQSLNSDLPNVDEADAL 671


>SPBC31F10.16 |||ChAPs family protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 679

 Score = 27.5 bits (58), Expect = 1.7
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = -2

Query: 449 LLFQDHFS--YIDHKDNVPIPKAALDPELRFREYSLYIWLLVYTVDENQEPVQIL*HTRE 276
           LL+ D  +  +  H+   PIP    D ELRF E +  ++ L YT+  + E V++  H   
Sbjct: 184 LLYSDDTNSRFAGHRRFNPIPNP--DAELRFFEAAEQLFTLGYTLGSSSE-VRVPTHVNN 240

Query: 275 H 273
           H
Sbjct: 241 H 241


>SPCC794.06 |||TDT malic acid transporter|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 431

 Score = 26.6 bits (56), Expect = 2.9
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
 Frame = -3

Query: 433 IFPILITKIMC----QSQKQLSTQNFVSVNIPYI-FGFWYIRSMKTRNLCKFYDI 284
           IFP +I  ++     +SQ     +N V   I +   GFW    +   N+C+F+ +
Sbjct: 175 IFPCMICGVIASAIVESQPARQAKNMVVAGIAFQGLGFWIYIIVYAVNMCRFFTV 229


>SPAC8E11.08c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 100

 Score = 26.2 bits (55), Expect = 3.8
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 356 YSLYIWLLVYTVDENQE 306
           Y LYIWLL Y  D N++
Sbjct: 44  YRLYIWLLPYRKDYNEK 60


>SPBC119.07 |ppk19||serine/threonine protein kinase
            Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1706

 Score = 25.8 bits (54), Expect = 5.1
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 416  DQYRKND-PEIKALITNTRIHLLPSMNPDGWQLATDTGG 529
            D YR+ D PEIK L ++T    + + NP   Q   DTGG
Sbjct: 1014 DVYRQTDNPEIK-LPSDTASSKVDTHNPTVTQPTDDTGG 1051


>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1016

 Score = 25.4 bits (53), Expect = 6.7
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 236 TRIYALSEPSVCNVPLYVIEFAQVPG 313
           T +Y  + P + +  LY+ +F +VPG
Sbjct: 195 TAVYTNAIPQIFSSTLYINDFVEVPG 220


>SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 624

 Score = 25.4 bits (53), Expect = 6.7
 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = -3

Query: 469 SGISNQSFYFRIIFP--ILITKIMCQSQKQLSTQNFVSVNIPYIFGFW 332
           S I NQ+++    +P  I+I+    + +K +     +    PY FG W
Sbjct: 232 SSIRNQTWFQNADYPYPIIISDSRLEEEKAIPANTSIFEFTPYEFGTW 279


>SPAC14C4.04 |B22918-2||hypothetical protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 267

 Score = 25.0 bits (52), Expect = 8.9
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +2

Query: 212 VHNNCPNITRIYALSEPSVCNVPLYVIEFAQVPGFHRPYIPEAKYI 349
           V    PN+  I + + P       Y+   +  P +   YIPE+KY+
Sbjct: 181 VQRAAPNL-EIKSTTTPLYMERASYLFGASNPPAYTYTYIPESKYV 225


>SPAC694.06c |mrc1||mediator of replication checkpoint 1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1019

 Score = 25.0 bits (52), Expect = 8.9
 Identities = 18/55 (32%), Positives = 22/55 (40%)
 Frame = +2

Query: 203 LQEVHNNCPNITRIYALSEPSVCNVPLYVIEFAQVPGFHRPYIPEAKYIGNIHGN 367
           L E+H N   +TR  AL    V    + + EF Q  GF      E K I     N
Sbjct: 211 LLELHRNTARLTRETALKPEVVVKKKVTLREFFQKIGFKNDNQLENKAISEEEAN 265


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,774,859
Number of Sequences: 5004
Number of extensions: 62358
Number of successful extensions: 164
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 275671126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)