Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15k16
         (395 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0348 - 22561589-22563656,22563788-22564602                       29   1.0  
08_02_0739 + 20584264-20584626,20586943-20587011,20587696-205880...    27   4.1  
10_08_0533 + 18592177-18592581,18592674-18593906                       27   5.5  
04_01_0403 + 5283830-5284106,5284996-5285179,5285801-5286015,528...    27   5.5  
02_02_0028 + 6196453-6196512,6196936-6197320,6197843-6197925,619...    27   5.5  
01_06_0575 - 30357556-30357582,30357698-30357944,30358039-303581...    27   5.5  
08_02_0076 + 11967606-11967905,11969125-11969223,11969813-119741...    26   9.6  

>11_06_0348 - 22561589-22563656,22563788-22564602
          Length = 960

 Score = 29.5 bits (63), Expect = 1.0
 Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
 Frame = -2

Query: 271 YNCHLIANASKRPFI*L*VNHVNFVFPKNVLYLIL-------SPAESYTFMCCVFMDLFF 113
           + CH++AN S+RP       H + + P+ +L  I+       SP  S   M    ++L  
Sbjct: 209 FQCHIVANFSRRP-------HGSKLVPQTILKQIIEQLEAPSSPNSSEITMLGDDLELLA 261

Query: 112 HFVSSSLKSQRFYTSFTSIY 53
             +S  LK +R++    +I+
Sbjct: 262 RNISERLKDKRYFALIDNIF 281


>08_02_0739 +
           20584264-20584626,20586943-20587011,20587696-20588006,
           20588447-20588648,20588887-20588958
          Length = 338

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
 Frame = +2

Query: 125 HKDTTHKCIGFSRRQNEIEHIFWKHKVHVIDSELDERSFG----GICDQVTIVFRYFIVS 292
           H D     +    +Q + + +F+ H+VH + +  DER        +C  V +VF      
Sbjct: 187 HLDAISSAMCKGNQQEDDQSLFYSHRVHEVLNTNDERRIDVDVCPMCTNVRLVFDCTRDG 246

Query: 293 CNR 301
           C R
Sbjct: 247 CRR 249


>10_08_0533 + 18592177-18592581,18592674-18593906
          Length = 545

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 293 CNRYRINEALFYKYWKNERMHL 358
           C R R ++AL    W  ER+HL
Sbjct: 125 CRRRRFSQALQLSMWMTERLHL 146


>04_01_0403 +
           5283830-5284106,5284996-5285179,5285801-5286015,
           5286616-5286736,5286862-5286974,5287823-5288055,
           5288717-5288832,5288949-5289047,5289512-5289691,
           5289816-5289903,5289999-5290208,5290599-5290820
          Length = 685

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 239 FGGICDQVTIVFRYFIVSCNRYRINEA 319
           FGG   Q T++  YF+ S N +  N A
Sbjct: 463 FGGTDPQTTLMTSYFLASANIFEANRA 489


>02_02_0028 +
           6196453-6196512,6196936-6197320,6197843-6197925,
           6198060-6198183,6198404-6198523,6198595-6198755,
           6198999-6199157,6199272-6199434,6199604-6199729,
           6199775-6199900,6200400-6200764,6201204-6201404,
           6201685-6201794,6201919-6202003,6202553-6202681,
           6202763-6202868,6202984-6203072,6203172-6203474
          Length = 964

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = -1

Query: 155 ILYIYVLCLYGLIFSFRFIEFEITTILYKFHFNIYFLLTKFSFL 24
           +LY+    L+G +   RF      ++ + ++F    L   F+FL
Sbjct: 405 LLYVMSFTLFGSVLGLRFFRLNDYSVQFVYYFAYMNLQISFAFL 448


>01_06_0575 - 30357556-30357582,30357698-30357944,30358039-30358161,
            30358275-30358301,30358475-30358633,30359764-30359948,
            30360225-30360293,30360432-30362354,30363018-30363339,
            30363506-30363543
          Length = 1039

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 346  LVLPVFVK*CFVYSISIAAYYKIPEY 269
            LVLP+F    ++Y   +  Y+KI +Y
Sbjct: 964  LVLPIFNGAAYIYETHVRRYFKIGQY 989


>08_02_0076 + 11967606-11967905,11969125-11969223,11969813-11974124,
            11974177-11974211
          Length = 1581

 Score = 26.2 bits (55), Expect = 9.6
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 123  TYFFISFHRV*NHNDSIQVSLQYIL 49
            TY F+  HR+  HND ++ S+  +L
Sbjct: 986  TYQFLGIHRLKIHNDFLRASIPLLL 1010


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,091,517
Number of Sequences: 37544
Number of extensions: 165411
Number of successful extensions: 298
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 298
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 684860244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)