Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15k16
         (395 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81489-9|CAE17759.1|  326|Caenorhabditis elegans Hypothetical pr...    29   0.91 
Z81117-14|CAB03313.3|  272|Caenorhabditis elegans Hypothetical p...    29   0.91 
Z73969-21|CAI46568.2|  272|Caenorhabditis elegans Hypothetical p...    29   0.91 
Z70783-12|CAI46596.2|  272|Caenorhabditis elegans Hypothetical p...    29   0.91 
U49830-16|AAK31480.1|  392|Caenorhabditis elegans Hypothetical p...    27   3.7  
AF039048-12|AAB94241.2|  296|Caenorhabditis elegans Hypothetical...    27   3.7  
AF003145-9|AAT68904.1|  585|Caenorhabditis elegans Hypothetical ...    27   4.9  
AF003145-8|AAB57721.2|  700|Caenorhabditis elegans Hypothetical ...    27   4.9  
Z70306-3|CAA94325.1|  318|Caenorhabditis elegans Hypothetical pr...    27   6.4  
Z99283-3|CAB16538.1|  327|Caenorhabditis elegans Hypothetical pr...    26   8.5  
Z81586-6|CAB04697.2|  393|Caenorhabditis elegans Hypothetical pr...    26   8.5  
Z72511-4|CAA96660.1|  395|Caenorhabditis elegans Hypothetical pr...    26   8.5  
AF016446-7|AAC24174.1|  330|Caenorhabditis elegans Serpentine re...    26   8.5  

>Z81489-9|CAE17759.1|  326|Caenorhabditis elegans Hypothetical
           protein C55A1.12 protein.
          Length = 326

 Score = 29.5 bits (63), Expect = 0.91
 Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 1/127 (0%)
 Frame = -2

Query: 382 NHVFLIFK*VHPLVLP-VFVK*CFVYSISIAAYYKIPEYNCHLIANASKRPFI*L*VNHV 206
           +  FL FK  +  V   VF+   F+YS+ +  Y  + + N     +    P      NH 
Sbjct: 10  DETFLYFKDKNVTVFSGVFILLIFMYSLILPFYLFVGKINREKDKSTILYPI----TNHF 65

Query: 205 NFVFPKNVLYLILSPAESYTFMCCVFMDLFFHFVSSSLKSQRFYTSFTSIYTFYSQNFHF 26
           + +    + YL+ +       + C F    F+F   +L    FY ++ S  TF+   F  
Sbjct: 66  SVMV--KIGYLVFTLMMVGFLIICKFK--IFNFPLKALNISTFYIAYVSTQTFHLLIFLL 121

Query: 25  YASKFHL 5
            A +F L
Sbjct: 122 AAERFVL 128


>Z81117-14|CAB03313.3|  272|Caenorhabditis elegans Hypothetical
           protein T06E6.3 protein.
          Length = 272

 Score = 29.5 bits (63), Expect = 0.91
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -2

Query: 151 YTFMCCVFMDLFFHFVSSSLKSQRFYTSFTSIYTFYSQNFHFYASKF 11
           Y  M C     +FHF+   +   RF + FT I  FY+Q F+   +K+
Sbjct: 53  YILMICYKASTYFHFI---ISLNRFLSVFTPI--FYNQMFNIKFTKY 94


>Z73969-21|CAI46568.2|  272|Caenorhabditis elegans Hypothetical
           protein ZK856.14 protein.
          Length = 272

 Score = 29.5 bits (63), Expect = 0.91
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = -1

Query: 152 LYIYVLCLYGLIFSFRFIEFEITTILYKFHFNIYFLLTKFSFLRLKISF 6
           L I+ +CL+G   SFR I F+      +FH  + F++ K +FL     F
Sbjct: 173 LSIFFICLHGYRMSFR-IAFKDN----RFHLTLLFVMIKLAFLLTNACF 216


>Z70783-12|CAI46596.2|  272|Caenorhabditis elegans Hypothetical
           protein ZK856.14 protein.
          Length = 272

 Score = 29.5 bits (63), Expect = 0.91
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = -1

Query: 152 LYIYVLCLYGLIFSFRFIEFEITTILYKFHFNIYFLLTKFSFLRLKISF 6
           L I+ +CL+G   SFR I F+      +FH  + F++ K +FL     F
Sbjct: 173 LSIFFICLHGYRMSFR-IAFKDN----RFHLTLLFVMIKLAFLLTNACF 216


>U49830-16|AAK31480.1|  392|Caenorhabditis elegans Hypothetical
           protein C33F10.12 protein.
          Length = 392

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -2

Query: 130 FMDLFFHFVSSSLKSQRFYTSFTSIYTFYSQNFHFYASKFHLP 2
           F ++F +  SS+L  +  Y   TSIY   S +  F+A  F  P
Sbjct: 124 FYEVFKNIYSSALGEENAYIWRTSIYLAASASAEFFADIFLAP 166


>AF039048-12|AAB94241.2|  296|Caenorhabditis elegans Hypothetical
           protein F16B4.10 protein.
          Length = 296

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -1

Query: 122 LIFSFRFIEFEITTILYKFHFNIYFLLTKFSFLRLKISFT 3
           LIFS R    EI    ++FH ++ F L+ F +    + FT
Sbjct: 26  LIFSTRKRRKEIVLFYFRFHIDVLFGLSYFLYSFFILGFT 65


>AF003145-9|AAT68904.1|  585|Caenorhabditis elegans Hypothetical
           protein B0414.8b protein.
          Length = 585

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 170 NEIEHIFWKHKVHVIDSELDERSFGGI 250
           N ++HIF     HV+ SE DER++G +
Sbjct: 119 NSLKHIF--DLPHVLRSEFDERNYGEV 143


>AF003145-8|AAB57721.2|  700|Caenorhabditis elegans Hypothetical
           protein B0414.8a protein.
          Length = 700

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 170 NEIEHIFWKHKVHVIDSELDERSFGGI 250
           N ++HIF     HV+ SE DER++G +
Sbjct: 119 NSLKHIF--DLPHVLRSEFDERNYGEV 143


>Z70306-3|CAA94325.1|  318|Caenorhabditis elegans Hypothetical
           protein C06G8.4 protein.
          Length = 318

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
 Frame = -3

Query: 375 CF*SLNKCILSFFQYL*NNASFILYLLQLTIKYLNTIVT*SQMPPKDLSSNSESIT*TLC 196
           CF +L  C L+ FQ      ++ L L+ +T+  +   VT   +  + + S    +  +  
Sbjct: 20  CFINLFLCYLAIFQSPKAIRTYSLVLINITLTNVGACVTGFLLDQRIIQSGKSMLYVSYG 79

Query: 195 FQKMCSISFCRRLNP--IHLCVVSLWTYFFISF 103
           +  +    FC  +    +H    +LW   F+SF
Sbjct: 80  YCSLLGEGFCFNIFAAYLHFHTHALW-LLFLSF 111


>Z99283-3|CAB16538.1|  327|Caenorhabditis elegans Hypothetical
           protein Y70C5C.4 protein.
          Length = 327

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 218 SELDERSFGGICDQVTIVFRYFIVSCNRYRINEAL 322
           S++ ++ F  +C QVT+ F   +V C    ++ AL
Sbjct: 233 SKMQKQLFKALCVQVTVPFVVVLVPCFYLNVSSAL 267


>Z81586-6|CAB04697.2|  393|Caenorhabditis elegans Hypothetical
           protein T05F1.8 protein.
          Length = 393

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -2

Query: 130 FMDLFFHFVSSSLKSQRFYTSFTSIYTFYSQNFHFYASKFHLP 2
           F ++F +  S SL  +  Y   TSIY   S +  F+A  F  P
Sbjct: 124 FYEVFKNIYSLSLGEENAYIWRTSIYLAASASAEFFADIFLAP 166


>Z72511-4|CAA96660.1|  395|Caenorhabditis elegans Hypothetical
           protein F55A11.7 protein.
          Length = 395

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
 Frame = -3

Query: 177 ISFCRRLNPIHLCVVSLW----TYFFISFH 100
           + FCRR    HLC V L+    T F I+FH
Sbjct: 222 VDFCRRYYIQHLCYVFLFAFVLTMFGIAFH 251


>AF016446-7|AAC24174.1|  330|Caenorhabditis elegans Serpentine
           receptor, class h protein21 protein.
          Length = 330

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = -1

Query: 179 LSHSVAG*ILYIYVLCLYGLIF--SFRFIEFEITTILYKFHFNIYFLLTKFSFL 24
           LSHS+    + IY L LY LIF  S  F  + I  +++    NI+F +    FL
Sbjct: 14  LSHSIHFISIPIYCLALYSLIFIKSNVFTTYRI-FLIWHVSENIFFEMYSAFFL 66


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,970,221
Number of Sequences: 27780
Number of extensions: 185746
Number of successful extensions: 541
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 541
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)