Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15k10
         (631 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   4.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   4.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   4.3  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   5.7  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   5.7  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.9  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   9.9  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   9.9  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   9.9  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   9.9  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/41 (19%), Positives = 21/41 (51%)
 Frame = +2

Query: 245 LHHKRSRAPGVPPVNEDLKEATENLDEIRDRKENERAVSTE 367
           +   ++  P + P N + +++  +  E   +KE + A +T+
Sbjct: 762 MSRNKALLPVIKPANVNKEQSPNSTKETTPKKERKTATTTQ 802


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 227  PESPTELHHKRSRAPGVPP 283
            P SP      + +APG+PP
Sbjct: 1485 PSSPVLSVRTQGQAPGIPP 1503


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 227  PESPTELHHKRSRAPGVPP 283
            P SP      + +APG+PP
Sbjct: 1481 PSSPVLSVRTQGQAPGIPP 1499


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 522 WPKKSKLLKRMTMIALPKKC 581
           WP   KLL  +T +  P +C
Sbjct: 2   WPGVLKLLVLLTFLLHPSRC 21


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 522 WPKKSKLLKRMTMIALPKKC 581
           WP   KLL  +T +  P +C
Sbjct: 2   WPGVLKLLVLLTFLLHPSRC 21


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +3

Query: 591 GRLMIPKGLRNGL 629
           GRL++P+G + G+
Sbjct: 602 GRLLLPRGKKEGM 614


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +3

Query: 591 GRLMIPKGLRNGL 629
           GRL++P+G + G+
Sbjct: 602 GRLLLPRGKKEGM 614


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 207 RHIDLNCQSRPQNYITNDP 263
           RH+ L+CQ R   +  +DP
Sbjct: 180 RHLILSCQGRLNIFPFDDP 198


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 207 RHIDLNCQSRPQNYITNDP 263
           RH+ L+CQ R   +  +DP
Sbjct: 180 RHLILSCQGRLNIFPFDDP 198


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 207 RHIDLNCQSRPQNYITNDP 263
           RH+ L+CQ R   +  +DP
Sbjct: 231 RHLILSCQGRLNIFPFDDP 249


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 207 RHIDLNCQSRPQNYITNDP 263
           RH+ L+CQ R   +  +DP
Sbjct: 180 RHLILSCQGRLNIFPFDDP 198


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,742
Number of Sequences: 438
Number of extensions: 4507
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)