Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15k02
(565 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 36 0.005
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 32 0.067
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 29 0.36
SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|... 29 0.36
SPAC2G11.03c |vps45||vacuolar sorting protein Vps 45|Schizosacch... 29 0.62
SPAC1805.04 |nup132|Nup133b, Nup133b|nucleoporin Nup132|Schizosa... 28 1.1
SPBC2G2.10c |mug110||sequence orphan|Schizosaccharomyces pombe|c... 27 1.9
SPMIT.08 |||mitochondrial ribosomal small subunit|Schizosaccharo... 27 2.5
SPCC736.11 |ago1|csp9|argonaute|Schizosaccharomyces pombe|chr 3|... 27 2.5
SPBC25B2.06c |btb2||BTB/POZ domain protein Btb2|Schizosaccharomy... 26 3.3
SPAC15A10.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 4.4
SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr 3|||Ma... 26 4.4
SPAC869.04 |||formamidase-like protein|Schizosaccharomyces pombe... 26 4.4
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 26 4.4
SPBC11G11.02c |end3||actin cortical patch component End3 |Schizo... 25 5.8
SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit Mcm5|Schi... 25 7.7
SPAC1D4.03c |aut12||autophagy associated protein Aut12|Schizosac... 25 7.7
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 35.5 bits (78), Expect = 0.005
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 4/156 (2%)
Frame = +2
Query: 95 SKLQILNNKMSEQRKNPSYMAQLLEKLGWDQGIRIPLANPGNQELETILINRQNEIQQL- 271
S +Q L+++++ + N Y +L +K D IR N ++L +L ++ +++L
Sbjct: 1516 STIQELDHEITASKNN--YEGKLNDK---DSIIRDLSENI--EQLNNLLAEEKSAVKRLS 1568
Query: 272 --KESFILQQQKR-EDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVKLRQLACSETDGLD 442
KES ILQ R DL +K V SE + L + ++L QLA +E L
Sbjct: 1569 TEKESEILQFNSRLADLEYHKSQVESELGRSKLKLASTTEEL-------QLAENERLSLT 1621
Query: 443 RGVIDCQKQCKDIGTRVDRLQINIARLLKKADTLKS 550
++D Q Q KD+ D L ++ L D++ S
Sbjct: 1622 TRMLDLQNQVKDLSNIKDSLSEDLRTLRSLEDSVAS 1657
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 31.9 bits (69), Expect = 0.067
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Frame = +2
Query: 110 LNNKMSEQRKNPSYMAQLLEKL--GWDQGIRIP---LANPGNQELETILINRQNEIQQLK 274
++N S Q +PS + +E L +DQ IP + N N L+T ++++
Sbjct: 1411 ISNLPSSQPGSPSKRSGKMEALIRNFDQNSSIPDPFIVNQRNSVLQTEFEKINLKLKEAT 1470
Query: 275 ESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVKLRQLA 418
+S IL + DL+K+ E + S +EN L L + K+ A
Sbjct: 1471 KSGILDNK---DLSKFSELIQSLLKENEELKNLTTSNLGSDDKMLDFA 1515
Score = 28.3 bits (60), Expect = 0.82
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 221 QELETILINRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQE 352
Q +E L N+Q EI L + ++K + K ++ + S+Y+E
Sbjct: 926 QSIEEDLANKQTEISYLSDLSSTLEKKLSSIKKDEQTISSKYKE 969
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 29.5 bits (63), Expect = 0.36
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = +2
Query: 107 ILNNKMSEQRKNPSYMAQLLEKLGWDQGIRIPLANPGNQELETILINRQNEIQQL----- 271
+L+N + +R+ + Q LE L ++P+ E + R NE+ ++
Sbjct: 385 VLSNMLDNERREKEALLQELESLRVQLSKKVPMPAKNTDERVIETLQRSNELLRMDISMQ 444
Query: 272 KESFILQQQKREDLNKYKE 328
E+ +L++Q+ + L K E
Sbjct: 445 NEALLLRKQENDRLVKQVE 463
Score = 26.6 bits (56), Expect = 2.5
Identities = 29/128 (22%), Positives = 63/128 (49%), Gaps = 10/128 (7%)
Frame = +2
Query: 179 WDQGIRIPLANPGNQELE-TILINRQNEIQQLKESFIL--QQQKREDLNKYKEFVH---S 340
WD + + Q +E T L + +I++ E+ ++ +QQ RED+++ +E+V
Sbjct: 488 WDS-MMVSRMKTQEQSIELTRLYKQLQDIEEDYENKLMRMEQQWREDVDQLQEYVEEITQ 546
Query: 341 EYQENTRLLFAHKQQLE--QEV--KLRQLACSETDGLDRGVIDCQKQCKDIGTRVDRLQI 508
E Q+ +L ++ + +EV KLR A E + ++ + + ++ V++L
Sbjct: 547 ELQDTKEVLSKSSKESDDYEEVVGKLRTEAEREIEKFEKTIRENEESISLFKEEVEKLTD 606
Query: 509 NIARLLKK 532
I +L ++
Sbjct: 607 EITQLSER 614
>SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 714
Score = 29.5 bits (63), Expect = 0.36
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = +2
Query: 203 LANPGNQELETILINRQNEIQQLKESFI-----LQQQKREDLNKYKEFVHSEYQENTRLL 367
L P ++ E I + + Q+K+S I L +++ +L KY+ V S+ + T+L
Sbjct: 451 LEAPWLRKTEQIAVVHEEHPAQIKKSEIDILNNLIEKEEGELTKYQTLVKSKTEILTQLY 510
Query: 368 FAHKQQLEQEVKLRQLAC 421
KQ LEQ+ K +AC
Sbjct: 511 TRKKQLLEQQGK-GNVAC 527
>SPAC2G11.03c |vps45||vacuolar sorting protein Vps
45|Schizosaccharomyces pombe|chr 1|||Manual
Length = 558
Score = 28.7 bits (61), Expect = 0.62
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 239 LINRQN--EIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQE 397
++ R+N E+ ++++S + + + D N + + S ENT+L A L E
Sbjct: 341 VVQRENLLEVGEVEQSLVCNEPQSTDFNDIQRLLFSNISENTKLRLAALYSLRFE 395
>SPAC1805.04 |nup132|Nup133b, Nup133b|nucleoporin
Nup132|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1162
Score = 27.9 bits (59), Expect = 1.1
Identities = 12/60 (20%), Positives = 29/60 (48%)
Frame = +2
Query: 359 RLLFAHKQQLEQEVKLRQLACSETDGLDRGVIDCQKQCKDIGTRVDRLQINIARLLKKAD 538
R+++ Q + LR+ + +D+ + + C D G+RV L + + ++ +A+
Sbjct: 582 RIIYRLTQSASSDNALREWFLHNIESIDQLIAQAHEFCIDSGSRVQELPLEVLDVIMEAN 641
>SPBC2G2.10c |mug110||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 248
Score = 27.1 bits (57), Expect = 1.9
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 345 YSECTNSLYLLRSSLFCCCSIND 277
Y CT L S+FCC SI+D
Sbjct: 46 YHSCTYQKNRLLRSIFCCMSIDD 68
>SPMIT.08 |||mitochondrial ribosomal small
subunit|Schizosaccharomyces pombe|chr
mitochondrial|||Manual
Length = 227
Score = 26.6 bits (56), Expect = 2.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 267 SLKNHLYYSNKKERILISIRSL 332
+L NHL YS+K +++IR+L
Sbjct: 82 ALSNHLLYSSKNYSFIVNIRAL 103
>SPCC736.11 |ago1|csp9|argonaute|Schizosaccharomyces pombe|chr
3|||Manual
Length = 834
Score = 26.6 bits (56), Expect = 2.5
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +2
Query: 233 TILINRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLL 367
TI +N +E + F +Q+ + +L+ +FV+S+Y + ++L
Sbjct: 95 TIKVNIGSESHPREIEFSIQKSSKINLHTLSQFVNSKYSSDPQVL 139
>SPBC25B2.06c |btb2||BTB/POZ domain protein Btb2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 284
Score = 26.2 bits (55), Expect = 3.3
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 563 HHTPQISMYQPFLADEQCLFVIYQL 489
H+T ++ P++ E CLFV+ L
Sbjct: 75 HYTIEVETEDPYVTKESCLFVLSTL 99
>SPAC15A10.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 190
Score = 25.8 bits (54), Expect = 4.4
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 559 THLRFQCISLF*QTSNVYL*SINSSSYVLALFLTVNNSSIKSICFT 422
+H+ + F T+N +L +I S S V F TV + +KSIC T
Sbjct: 5 SHITRTQVDDFPTTTNFFLTNILSMSVV---FRTVEDPELKSICTT 47
>SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr
3|||Manual
Length = 462
Score = 25.8 bits (54), Expect = 4.4
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 154 GSTIGKIRMGSRHQNSISQSRKSRIRDYSYKQAK*NSAA*RIIYT-TATKK 303
G++ I M H NSI SR + Y K+ SAA I YT TA K
Sbjct: 249 GASTVDIPMDRTHDNSIWASRYAHFPPYDKKKDTTRSAADYIPYTYTALTK 299
>SPAC869.04 |||formamidase-like protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 410
Score = 25.8 bits (54), Expect = 4.4
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = +2
Query: 413 LACSETDGLDRGVIDCQKQCKDIGTRVDRLQINIA 517
L+C+ G G++D C IG +D + +++
Sbjct: 358 LSCAPIQGHVAGIVDIPNSCTTIGVPMDIFEFDVS 392
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 25.8 bits (54), Expect = 4.4
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 311 LNKYKEFVHSEYQENTRLLFA-HKQQLEQEVKLRQLACSETDGLDRGVIDCQKQCKDIGT 487
LNKY+ ++ +E + A K++ E E KL++ A ETD + V ++ +++
Sbjct: 1343 LNKYERVDPTQLEELKKNCEALEKEKQELETKLQETA-KETDTFKQQVNSLNEEVENLKK 1401
Query: 488 RVDRLQINIARL 523
V++ RL
Sbjct: 1402 EVEQANTKNTRL 1413
>SPBC11G11.02c |end3||actin cortical patch component End3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 375
Score = 25.4 bits (53), Expect = 5.8
Identities = 19/102 (18%), Positives = 48/102 (47%)
Frame = +2
Query: 239 LINRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVKLRQLA 418
LI+ +NE+ +L E + Q++ +D+N + Q + + + +K + Q +K
Sbjct: 274 LISLRNELSKLDEKILSLQRETDDVN-IAQNKSKLIQRDLQKVLDYKLGILQSLKNDGPN 332
Query: 419 CSETDGLDRGVIDCQKQCKDIGTRVDRLQINIARLLKKADTL 544
+D + ++Q +G ++ + +A+L ++ +L
Sbjct: 333 GPSASAIDNDLKMLEQQLNVLGRHLEGRKSQVAKLEERLRSL 374
>SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit
Mcm5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 25.0 bits (52), Expect = 7.7
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Frame = +2
Query: 176 GWDQG-IRIPLANPGNQELETILINRQNEIQQLKE-----SFILQQQKREDL 313
GW++ + PG QEL++ + + +N IQ ++E FI + Q R++L
Sbjct: 6 GWERSAVYYTPVLPGEQELDSNVSHEKNFIQFIEEFVIDNDFIYRTQLRDNL 57
>SPAC1D4.03c |aut12||autophagy associated protein
Aut12|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 25.0 bits (52), Expect = 7.7
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -2
Query: 330 NSLYLLRSSLFCCCSINDSLSC*ISFC 250
N LYLL SLF S NDS+ + C
Sbjct: 303 NDLYLLFLSLFRTQSFNDSMEHWVPVC 329
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,087,330
Number of Sequences: 5004
Number of extensions: 39810
Number of successful extensions: 147
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 238029836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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