BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15k02
(565 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1098 + 30876785-30876835,30876846-30877171,30877396-308774... 32 0.36
01_06_0481 - 29646245-29646371,29646474-29646556,29646672-296467... 31 0.63
07_03_0775 - 21413522-21413797,21414016-21414178,21414274-214143... 31 0.84
12_02_0651 + 21522089-21522128,21522472-21522593,21523386-215235... 30 1.1
03_06_0341 - 33261210-33261327,33261411-33262057,33262950-332630... 30 1.1
03_05_1112 + 30488678-30488806,30489047-30489228,30489310-304895... 29 1.9
02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-75... 29 1.9
02_01_0325 - 2208480-2208674,2208772-2210609,2210980-2211109,221... 29 2.6
01_06_0836 - 32321431-32321556,32321656-32321872,32321975-323235... 29 2.6
11_06_0141 + 20559828-20559986,20560074-20560281,20560375-205604... 29 3.4
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 29 3.4
09_04_0285 + 16390786-16391291,16391370-16391957,16392034-163921... 28 4.5
06_01_1196 + 10289708-10289823,10290828-10291541,10291614-102920... 28 4.5
03_05_1124 + 30559633-30559674,30559781-30559890,30559973-305600... 28 4.5
09_02_0057 - 3697255-3698116,3698191-3698351,3698442-3698636,369... 28 5.9
09_01_0076 + 1105331-1105453,1106559-1106705,1107046-1107195,110... 27 7.8
07_01_0276 + 2028983-2029070,2030084-2030151,2030317-2031246,203... 27 7.8
05_04_0349 + 20492334-20492494,20493245-20493324,20493951-204940... 27 7.8
03_02_0492 - 8861472-8861517,8862672-8862781,8862889-8863059,886... 27 7.8
03_01_0027 - 250837-250877,250972-252909,253733-253805,254476-25... 27 7.8
02_03_0102 - 15238808-15239437,15241609-15243264 27 7.8
02_01_0642 - 4803464-4805665,4806231-4806320 27 7.8
>04_04_1098 +
30876785-30876835,30876846-30877171,30877396-30877418,
30877687-30879392
Length = 701
Score = 31.9 bits (69), Expect = 0.36
Identities = 24/78 (30%), Positives = 40/78 (51%)
Frame = +2
Query: 263 QQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVKLRQLACSETDGLD 442
+QLK L+++KR K KE + +E + L KQ+ E+E K ++L + +
Sbjct: 625 RQLKHDE-LERKKRSQDEKRKELEKQKQEEERKELDRQKQR-EEERKAKELEKQKQREEE 682
Query: 443 RGVIDCQKQCKDIGTRVD 496
R ++ QKQ + G R D
Sbjct: 683 RKALEKQKQGERDGDRYD 700
>01_06_0481 - 29646245-29646371,29646474-29646556,29646672-29646752,
29646843-29646899,29647007-29647094,29647304-29647374,
29647457-29647585,29647662-29648051,29648332-29648517,
29648612-29648692,29648787-29648879,29648966-29649086,
29649200-29649409,29649560-29649727,29649898-29650065,
29650144-29650311,29650453-29650620,29650738-29650905,
29651023-29651190,29651567-29651734,29652391-29652558,
29652645-29652812,29655720-29655887,29656069-29656236,
29656391-29656558,29656670-29656837,29657525-29657664,
29658033-29658221,29658243-29658315,29658379-29658452,
29658535-29658654,29658718-29658738,29658794-29658999,
29659094-29659271,29660066-29660126,29660232-29660341,
29660427-29660558,29661091-29661258,29661339-29661465,
29661794-29661831,29663321-29663422,29663505-29663562,
29663659-29663760,29663844-29663990,29664098-29664234,
29664313-29664462,29664561-29664720,29665820-29665878,
29666025-29666181,29666288-29666433,29666523-29666666,
29667242-29667376
Length = 2344
Score = 31.1 bits (67), Expect = 0.63
Identities = 24/115 (20%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Frame = +2
Query: 215 GNQELETILINRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQ 394
G + + + + E Q K++F Q+ + L Y++ E ++N L + ++LE+
Sbjct: 1385 GATTTDALYLTERQEHDQTKKAFSEAQEINQQL--YRKI--EEAEKNIEQLRENVERLEE 1440
Query: 395 EV----KLRQLACSETDGLDRGVIDCQKQCKDIGTRVDRLQINIARLLKKADTLK 547
+ L + E + + + D QK+ +++ +D +Q N+A + + DT++
Sbjct: 1441 RIAYIDSLLAIERRENNETKKELADAQKEIEEL---LDEMQDNVASIAEHEDTIR 1492
>07_03_0775 -
21413522-21413797,21414016-21414178,21414274-21414351,
21415983-21416176
Length = 236
Score = 30.7 bits (66), Expect = 0.84
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +2
Query: 236 ILINRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVK 403
++ ++E Q+LKES Q+K ++L K + E Q+ L A K+ LEQ++K
Sbjct: 119 VMAELRSEAQKLKESNESLQEKIKELKAEKNELRDEKQK----LKAEKESLEQQIK 170
>12_02_0651 +
21522089-21522128,21522472-21522593,21523386-21523544,
21523653-21523730,21523821-21523865,21524121-21524187,
21524261-21524322,21524407-21524546,21524752-21524878,
21524957-21525071,21525210-21525298,21525533-21525616,
21525857-21526219,21526300-21526689,21526835-21526894,
21527530-21527553
Length = 654
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 221 QELETILINRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQ-ENTRLLFAHKQ 382
++LE L N++ E + LKE + +E+ N VH++ + +TR + A +Q
Sbjct: 586 EQLERRLANKEKEAEMLKEKIAGLELAQEESNNLSNTVHADNELHSTRRVLAGEQ 640
>03_06_0341 -
33261210-33261327,33261411-33262057,33262950-33263061,
33263313-33264097,33264797-33264867,33266323-33266635
Length = 681
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +2
Query: 182 DQGIRIPLANPGNQELETILINRQNEIQQLKESFILQQQ-KREDLNKYKEFVHSEYQENT 358
D I P + Q+L+ + +QQ ++ F QQQ +++ + ++F H + Q+
Sbjct: 488 DSQIDSPYGSLTRQQLQQL--RHHQLLQQQQQQFQQQQQVQQQQQQQQQQFQHQQQQQQQ 545
Query: 359 RLLFAHKQQLEQEVKLRQ 412
+ H+QQ +Q +L+Q
Sbjct: 546 QFQQQHQQQ-QQSQQLQQ 562
>03_05_1112 +
30488678-30488806,30489047-30489228,30489310-30489505,
30490095-30491117
Length = 509
Score = 29.5 bits (63), Expect = 1.9
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +2
Query: 221 QELETILINRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQEV 400
+E ET++ Q E++Q +E +Q E+ + + E+Q A K +LEQ +
Sbjct: 87 KEKETLITTMQTELEQTREENTQLKQSLEEKTSALDLIIQEHQ-------AVKAELEQAL 139
Query: 401 KLRQLACSETDGL-DRGVIDCQKQCK 475
+++A E L DR +++ K +
Sbjct: 140 TKQKVAEDENRNLIDRWMLEKMKDAE 165
>02_01_0102 -
749122-749799,750123-750371,750753-750851,751380-751889,
752025-753905,754093-754296,754807-754899,755036-755122,
755241-755328,755533-755645,755943-757259,757398-758672,
759166-759273
Length = 2233
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Frame = +2
Query: 122 MSEQRKNPSYMAQLLEKLGWDQGIRIPLANPGN-----QELETILINRQNEIQQLKESFI 286
MS NP MAQL W + + L+NP N Q L + NR +Q+ E +
Sbjct: 231 MSNAGANPMAMAQLQAIQAWAKEHNVDLSNPANVTLISQILPMLQSNRMAAMQKQNEVGM 290
Query: 287 LQQQK 301
QQ+
Sbjct: 291 ASQQQ 295
>02_01_0325 -
2208480-2208674,2208772-2210609,2210980-2211109,
2211231-2211270,2211409-2211531,2211940-2212030,
2212396-2212480,2212565-2212720,2212797-2212853,
2212940-2213110,2213313-2213330,2213479-2213551,
2213754-2213839,2214348-2214466,2214542-2214641
Length = 1093
Score = 29.1 bits (62), Expect = 2.6
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Frame = +2
Query: 107 ILNNKMSEQRKNPSYMAQLLEKLGWDQGIRIPLANPG---NQELETILINRQNEIQQLKE 277
I+ N+M +Q+ +P+ Q + G R+ L++ N +L+ L+ +Q QQL++
Sbjct: 578 IVQNQMQQQKPSPTQNPQRIN------GQRLLLSHQQKDQNLQLQQQLLLQQK--QQLQQ 629
Query: 278 SFILQQQKREDLNK-YKEFVHSEYQENTRLLFAHKQQLEQEVKLRQ 412
QQQ ++ LNK + V+ Q++ LF + QL+ KL+Q
Sbjct: 630 QQQQQQQNQQQLNKSLGQLVNLASQQSK--LFDEELQLQILQKLQQ 673
>01_06_0836 -
32321431-32321556,32321656-32321872,32321975-32323590,
32323670-32323753,32323834-32324104,32324294-32324547,
32324709-32324918,32325839-32326024
Length = 987
Score = 29.1 bits (62), Expect = 2.6
Identities = 27/130 (20%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Frame = +2
Query: 83 DIV*SKLQILNNKMSEQRKNPSYMAQLLEKLGWDQGIRIPLANPGNQELETILINRQNEI 262
DI ++++LN+ + Q + SY+ + E+ + + N + + T L + E+
Sbjct: 607 DIDIQRVELLNSAKARQMEIDSYLREREEEFEQKKAKELEHINSQKEMINTKLEHVAVEL 666
Query: 263 QQL----KESFILQQQKREDLNKYKEFVHS------EYQENTRLLFAHKQQLEQEVKLRQ 412
Q+L KE+ + ++++ ++L++ K + + + QE +LL + ++ + V+++Q
Sbjct: 667 QKLKDERKEATLERERREQELSEIKGTIEALNNQREKLQEQRKLLHSDREAI--TVQIQQ 724
Query: 413 LACSETDGLD 442
L E +D
Sbjct: 725 LNVLEELKID 734
>11_06_0141 +
20559828-20559986,20560074-20560281,20560375-20560433,
20560532-20560590,20560809-20560886,20560974-20561073,
20561174-20561245,20561327-20561434,20561677-20561730,
20562847-20563296
Length = 448
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +2
Query: 248 RQNEIQQLKESFILQQQ---KREDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVKL 406
R+N SF LQ++ ++E K +E +H++ E T L K+ E E+KL
Sbjct: 199 RKNAAAAAGFSFRLQERAEKRKEFYQKLEEKIHAKELEQTNLQAKSKESQEAEIKL 254
>01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 28.7 bits (61), Expect = 3.4
Identities = 28/121 (23%), Positives = 58/121 (47%)
Frame = +2
Query: 194 RIPLANPGNQELETILINRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFA 373
+I + N+ELE N QNE+ ++Q+QK E + E + ++N ++
Sbjct: 755 QISVMQKNNEELELANSNLQNELA------MVQEQKNEAVASTVELGNKLEEQNQQI--- 805
Query: 374 HKQQLEQEVKLRQLACSETDGLDRGVIDCQKQCKDIGTRVDRLQINIARLLKKADTLKSE 553
L++ V+ L ++TD + + CQ++ +V +L+ N+ L + + +S+
Sbjct: 806 --SNLQEAVE--NLEAAKTDMYNELTV-CQEEKNAALLQVQQLEANLKNLESELEQKQSQ 860
Query: 554 V 556
V
Sbjct: 861 V 861
>09_04_0285 +
16390786-16391291,16391370-16391957,16392034-16392160,
16392291-16392477,16392585-16392741,16392847-16393201
Length = 639
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/107 (17%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Frame = +2
Query: 221 QELETILINRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQL-EQE 397
+E +I ++Q+ S +Q + +K + +++ +F +++ + +
Sbjct: 199 EERSDQIIQESRKVQETISSIEMQADHLAEASKNVGDQIDDVLAHSKAIFEQSKEIADSQ 258
Query: 398 VKLRQLACSETDGLDRGVIDCQKQCKDIGTRVDRLQ---INIARLLK 529
KLR+ + +D G+ Q+ + +G +D+L+ ++I R +K
Sbjct: 259 AKLREGQTEMRETIDAGMTHIQESYESLGNGMDKLKEEAVDIQREIK 305
>06_01_1196 +
10289708-10289823,10290828-10291541,10291614-10292058,
10292329-10293642
Length = 862
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 357 LASYLLTSSSWSRKLNYGSWLVVKQMDL 440
LASYL T + R N GSW++V D+
Sbjct: 265 LASYLRTELNERRNNNKGSWVIVTTRDV 292
>03_05_1124 + 30559633-30559674,30559781-30559890,30559973-30560030,
30560455-30560718,30560803-30560940,30561264-30561315,
30561525-30561604,30561929-30561988,30562084-30562164,
30562299-30562376,30563548-30563676,30563896-30564039,
30564145-30564290,30564402-30564558,30564657-30564715,
30564800-30564959,30565054-30565203,30565309-30565445,
30565531-30565677,30565995-30566052,30566417-30566518,
30566590-30566627,30566846-30566972,30567053-30567223,
30567313-30567444,30567575-30567681,30567815-30567875,
30567970-30568147,30568245-30568450,30568781-30568879,
30569021-30569236,30569333-30569472,30569559-30569660,
30569747-30569861,30570129-30570194,30570323-30570480,
30570594-30570690,30570931-30571137,30571435-30571505,
30571648-30571747,30571836-30571892,30571969-30572025,
30572108-30572188,30572319-30572401,30572504-30572651
Length = 1722
Score = 28.3 bits (60), Expect = 4.5
Identities = 30/144 (20%), Positives = 67/144 (46%), Gaps = 12/144 (8%)
Frame = +2
Query: 158 QLLEKLGWDQGIRIPLANPGNQELETILINRQNEIQQLKESFILQQQKREDLNKYKE--- 328
+L +L ++ +RI L QE+ + Q ++L E+ ++++ED E
Sbjct: 1145 ELTWRLDVEKHLRIDLEEAKGQEISNLKSVLQEMQEKLSEAHAAIEKEKEDAKLAIEQAP 1204
Query: 329 --FVHSEYQENTRLLFAHKQQLEQEVKLRQLACSETDGLDRGVIDCQKQCKDIG------ 484
V +N ++ +Q E E +L ++ + L++ +++ QK+ ++
Sbjct: 1205 PKIVEVPVVDNAKVELLTRQNKELEDELVTFR-TKAEDLEKRLLEVQKESDELSREILEK 1263
Query: 485 -TRVDRLQINIARLLKKADTLKSE 553
+++++LQ I RL +L+SE
Sbjct: 1264 DSKLNQLQEMIERLETNLSSLESE 1287
>09_02_0057 -
3697255-3698116,3698191-3698351,3698442-3698636,
3698728-3699126,3699208-3699477,3700102-3700695
Length = 826
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 167 EKLGWDQGIRIPLANPGNQELETILINRQNEIQQLKESFILQQQK 301
E++G +Q + PG Q +E ++RQ E+Q++K F Q K
Sbjct: 451 ERMGINQNKLLRPRRPGFQFIEEGKLSRQAELQRIKNQFGEAQAK 495
>09_01_0076 +
1105331-1105453,1106559-1106705,1107046-1107195,
1107272-1107531,1107897-1108084,1108187-1108311,
1108485-1108521,1108802-1108893,1109023-1109133,
1109242-1109352,1109576-1109669,1109833-1109945,
1110316-1110411,1110510-1110617,1110665-1110814,
1110910-1110990,1111205-1111276,1111553-1111646,
1111759-1111787,1111870-1111967,1112065-1112160,
1112399-1112620,1113002-1113158,1113472-1113627,
1113703-1113930
Length = 1045
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 248 RQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQ 394
++N++Q LKE +Q+ E K +E +HS + +L KQ+ EQ
Sbjct: 604 QENQVQLLKE----KQKSDEAAKKLQEEIHSIKAQKVQLQHKIKQEAEQ 648
>07_01_0276 + 2028983-2029070,2030084-2030151,2030317-2031246,
2031334-2031415,2031544-2031609,2032606-2033304,
2033422-2035424,2035599-2036173,2037060-2037223,
2037306-2037365,2037475-2037839
Length = 1699
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/71 (21%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +2
Query: 200 PLANPGNQELETILINRQNEIQQLKESFILQQQKREDLNKYK----EFVHSEYQENTRLL 367
P P L+ +++ +Q + QQ+++ QQQ ++ + + + + + E Q+ +LL
Sbjct: 852 PQPQPQLSMLDKMMLLKQQQQQQMQQQMQQQQQMQQQMQQQQKQRLQLLQLEQQQQQQLL 911
Query: 368 FAHKQQLEQEV 400
+ L Q +
Sbjct: 912 LQQQHLLSQVI 922
>05_04_0349 +
20492334-20492494,20493245-20493324,20493951-20494020,
20494089-20494139,20494535-20494649,20495401-20496268,
20496453-20496628,20500217-20500276,20501617-20501694,
20501951-20502008,20502658-20502720,20503397-20503453,
20503599-20503661,20504081-20504454
Length = 757
Score = 27.5 bits (58), Expect = 7.8
Identities = 17/81 (20%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Frame = +2
Query: 251 QNEIQQLKESFILQQQKREDLNKYKE-FVHSEYQENTRLLFAH------KQQLEQEVKLR 409
+ E + L+ + KR+ ++ + F+ +E++E R + A ++L++ KL
Sbjct: 507 EEECEDLRSLSRKEPSKRQTVSSELDVFIQAEFEEKARSMHADIMSHWINKELQRLEKLI 566
Query: 410 QLACSETDGLDRGVIDCQKQC 472
++A + ++ +DC K C
Sbjct: 567 EMANEKGTNSNKDRVDCLKSC 587
>03_02_0492 -
8861472-8861517,8862672-8862781,8862889-8863059,
8863158-8863262,8863342-8863431,8863719-8863813,
8863933-8864101,8864193-8864345,8864562-8864639,
8864883-8864957,8865076-8865098,8865181-8865268,
8865397-8865432
Length = 412
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 410 QLACSETDGLDRGVIDCQKQCKDIGTRVDRLQINIARLLKKADT 541
Q A + T + V DC KQ +++ + +++L++ A LLK ++T
Sbjct: 292 QEAVAVTMQWENQVKDCLKQNEELRSHLEKLRLEQATLLKTSNT 335
>03_01_0027 -
250837-250877,250972-252909,253733-253805,254476-254555,
255336-255595,255721-255785,256747-256839
Length = 849
Score = 27.5 bits (58), Expect = 7.8
Identities = 22/102 (21%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = +2
Query: 251 QNEIQQLKESFILQQQKREDLNK-YKEFVHSEYQENTRLLFAHKQQLEQEVKLRQLACSE 427
Q+E++ L + +QQ++ E K K F + +E + L A L + +L Q C E
Sbjct: 523 QSELEALDQKVKMQQEELEQKQKELKSFNLTFQEEQDKRLQAESALLSEGKELAQ--CQE 580
Query: 428 TDGLDRGVIDCQKQCKDIGTRVDRLQINIARLLKKADTLKSE 553
L + ++ ++ L+ ++ L K+ ++L +
Sbjct: 581 VQRLTMEIQMANEKLNELKQTKVNLENAVSELKKEVESLTEQ 622
>02_03_0102 - 15238808-15239437,15241609-15243264
Length = 761
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +2
Query: 389 EQEVKLRQLACSETDGLDRGVIDCQKQCKDIGTRVDRLQINIARLLKKADTLKS 550
E + LR+L DG+ +I+ Q++C GT++ R + +L + A + S
Sbjct: 288 ENDAVLRELRGE--DGVAYAIIELQEECDSRGTQILRRYADYRKLARLASDINS 339
>02_01_0642 - 4803464-4805665,4806231-4806320
Length = 763
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/87 (20%), Positives = 41/87 (47%)
Frame = +2
Query: 206 ANPGNQELETILINRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQ 385
AN ++ E + ++EI++ + F + R+ + + E + A +++
Sbjct: 241 ANQAAEQQEATIKELRSEIKRKEIDFSRSNELRKANEQKLKIAEQELERQNMGWLAAQKE 300
Query: 386 LEQEVKLRQLACSETDGLDRGVIDCQK 466
L++ + QLAC + DG+ V D ++
Sbjct: 301 LKE---VAQLACKDMDGIKDTVSDFKR 324
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,950,999
Number of Sequences: 37544
Number of extensions: 204526
Number of successful extensions: 594
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1293275844
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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