Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15k02
(565 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical ... 34 0.081
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 33 0.14
U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body prot... 31 0.57
U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body prot... 31 0.57
U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body prot... 31 0.57
J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein ( C.ele... 31 0.57
AL033514-18|CAA22085.1| 170|Caenorhabditis elegans Hypothetical... 31 0.57
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 30 1.0
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 30 1.0
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 30 1.0
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 30 1.0
U43375-6|AAA83623.2| 515|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF125447-1|AAD12807.1| 414|Caenorhabditis elegans Hypothetical ... 29 3.1
Z79756-3|CAB02121.1| 527|Caenorhabditis elegans Hypothetical pr... 28 4.0
U40160-1|AAA81155.3| 531|Caenorhabditis elegans Hypothetical pr... 28 4.0
AL132904-24|CAC35834.2| 459|Caenorhabditis elegans Hypothetical... 28 4.0
AC006730-6|AAX22282.1| 324|Caenorhabditis elegans Serpentine re... 28 4.0
AC006730-5|AAF60478.4| 320|Caenorhabditis elegans Serpentine re... 28 4.0
Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 28 5.3
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 28 5.3
AF098989-3|AAK18953.2| 569|Caenorhabditis elegans Hypothetical ... 27 7.0
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 27 9.3
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 27 9.3
>AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical
protein Y39G10AR.10 protein.
Length = 690
Score = 33.9 bits (74), Expect = 0.081
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Frame = +2
Query: 104 QILNNKMSEQRKNPSYMAQLLE--KLGWDQGIRIPLANPGNQEL----ETILINRQNEIQ 265
+ L + E ++ + +A L E KLG D+ + EL ET L+ + E
Sbjct: 317 ECLQFRKDEHEQDEAVIAHLEEQLKLGSDKAAAFSSEHSDTIELLRESETELMELRMENY 376
Query: 266 QLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVKLRQLA 418
LKE F + ++++ED+N+ E + + + K Q++ E+ + +A
Sbjct: 377 DLKEDFKILKEEKEDVNRTCECLREQLSTTIQERDIEKGQMQSEMDAKMVA 427
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 33.1 bits (72), Expect = 0.14
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Frame = +2
Query: 227 LETILINRQNEIQQLKESFILQQQKREDLNKYKEF--VHSEYQENTRLLFAHKQQLEQEV 400
LE L N++ E+Q L + L Q K E +K + V SE+ E + +++L ++
Sbjct: 340 LEKKLHNKEKEVQTLTKE--LDQVKTETNDKIRRLTEVTSEFAEYRKKFQQQEEELRRKA 397
Query: 401 KLRQLACSETDGLDRGVIDCQKQCKDIGTRVDRLQ 505
+L + + + L+ + D Q + K + +V+ L+
Sbjct: 398 RLLTVVEAAKEKLESVISDLQVEVKALKNKVEFLE 432
>U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body protein
1, isoform b protein.
Length = 369
Score = 31.1 bits (67), Expect = 0.57
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = +2
Query: 314 NKYKEFVHSEYQENTRLLFAHKQQLEQEVKLRQLACSETDGLDRGVIDCQKQCKDIGTRV 493
N + E QEN ++ A K+ +L QL E G + +I+C K D V
Sbjct: 197 NLHNELKQWSSQEND-IVAAAKRMAILMARLSQLVRGE-GGTKKDLINCSKAIADSSEEV 254
Query: 494 DRLQINIARL 523
RL + +ARL
Sbjct: 255 TRLAVQLARL 264
>U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body protein
1, isoform a protein.
Length = 1010
Score = 31.1 bits (67), Expect = 0.57
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = +2
Query: 314 NKYKEFVHSEYQENTRLLFAHKQQLEQEVKLRQLACSETDGLDRGVIDCQKQCKDIGTRV 493
N + E QEN ++ A K+ +L QL E G + +I+C K D V
Sbjct: 838 NLHNELKQWSSQEND-IVAAAKRMAILMARLSQLVRGE-GGTKKDLINCSKAIADSSEEV 895
Query: 494 DRLQINIARL 523
RL + +ARL
Sbjct: 896 TRLAVQLARL 905
>U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body protein
1, isoform c protein.
Length = 999
Score = 31.1 bits (67), Expect = 0.57
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = +2
Query: 314 NKYKEFVHSEYQENTRLLFAHKQQLEQEVKLRQLACSETDGLDRGVIDCQKQCKDIGTRV 493
N + E QEN ++ A K+ +L QL E G + +I+C K D V
Sbjct: 838 NLHNELKQWSSQEND-IVAAAKRMAILMARLSQLVRGE-GGTKKDLINCSKAIADSSEEV 895
Query: 494 DRLQINIARL 523
RL + +ARL
Sbjct: 896 TRLAVQLARL 905
>J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein ( C.elegans
vinculin (deb-1) gene, complete cds. ).
Length = 1010
Score = 31.1 bits (67), Expect = 0.57
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = +2
Query: 314 NKYKEFVHSEYQENTRLLFAHKQQLEQEVKLRQLACSETDGLDRGVIDCQKQCKDIGTRV 493
N + E QEN ++ A K+ +L QL E G + +I+C K D V
Sbjct: 838 NLHNELKQWSSQEND-IVAAAKRMAILMARLSQLVRGE-GGTKKDLINCSKAIADSSEEV 895
Query: 494 DRLQINIARL 523
RL + +ARL
Sbjct: 896 TRLAVQLARL 905
>AL033514-18|CAA22085.1| 170|Caenorhabditis elegans Hypothetical
protein Y75B8A.18 protein.
Length = 170
Score = 31.1 bits (67), Expect = 0.57
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +2
Query: 209 NPGNQELETILINRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQL 388
NP E+I+ NRQNE+ ++K L ++ + ++ E + ++ E TRL ++L
Sbjct: 95 NPEMSYWESIVANRQNEVDRIK---ALNEKMEVEKSRKSEMLDAKQTEYTRLFDLGNEKL 151
Query: 389 EQ 394
++
Sbjct: 152 KK 153
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
protein W02B8.2 protein.
Length = 1256
Score = 30.7 bits (66), Expect = 0.76
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Frame = +2
Query: 218 NQELETILIN-RQNEIQQLKESFILQQQKREDLNKYKEFV---HSEYQENTRLLFAHKQQ 385
N++L+ IL RQN+ + L+E+ L++ E + K +EF HS + RL K+
Sbjct: 551 NKKLQQILEEVRQNQSKVLEENVKLRKGMAEAIEKIEEFKRNWHSSREAGERLQLEAKEN 610
Query: 386 LEQEVKLRQ 412
E+ +K+ +
Sbjct: 611 EEKVLKVEE 619
>Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical
protein R07E5.1 protein.
Length = 812
Score = 30.7 bits (66), Expect = 0.76
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +2
Query: 245 NRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVKLRQLACS 424
N ++E + KE + +++ EDL + +E V + +EN + + ++LE LR
Sbjct: 661 NSEDEEAEEKERQEILKKREEDLKRRREIVEKKEEENRKRVEKELKELENRDLLRVSKQQ 720
Query: 425 ETDGL 439
E D +
Sbjct: 721 EDDDI 725
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
F07A11.6e protein.
Length = 2101
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/61 (26%), Positives = 34/61 (55%)
Frame = +2
Query: 248 RQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVKLRQLACSE 427
++NE Q+ ++ + QQ +D K +E V Y+EN R + +++ +++ + RQ +
Sbjct: 1738 QENEANQMMQAKMKQQTINKDRIKEQERVKRMYEENERKVEEDRREKQRKEEERQRLAAA 1797
Query: 428 T 430
T
Sbjct: 1798 T 1798
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/61 (26%), Positives = 34/61 (55%)
Frame = +2
Query: 248 RQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVKLRQLACSE 427
++NE Q+ ++ + QQ +D K +E V Y+EN R + +++ +++ + RQ +
Sbjct: 2029 QENEANQMMQAKMKQQTINKDRIKEQERVKRMYEENERKVEEDRREKQRKEEERQRLAAA 2088
Query: 428 T 430
T
Sbjct: 2089 T 2089
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/61 (26%), Positives = 34/61 (55%)
Frame = +2
Query: 248 RQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVKLRQLACSE 427
++NE Q+ ++ + QQ +D K +E V Y+EN R + +++ +++ + RQ +
Sbjct: 2044 QENEANQMMQAKMKQQTINKDRIKEQERVKRMYEENERKVEEDRREKQRKEEERQRLAAA 2103
Query: 428 T 430
T
Sbjct: 2104 T 2104
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/61 (26%), Positives = 34/61 (55%)
Frame = +2
Query: 248 RQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVKLRQLACSE 427
++NE Q+ ++ + QQ +D K +E V Y+EN R + +++ +++ + RQ +
Sbjct: 1848 QENEANQMMQAKMKQQTINKDRIKEQERVKRMYEENERKVEEDRREKQRKEEERQRLAAA 1907
Query: 428 T 430
T
Sbjct: 1908 T 1908
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/61 (26%), Positives = 34/61 (55%)
Frame = +2
Query: 248 RQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVKLRQLACSE 427
++NE Q+ ++ + QQ +D K +E V Y+EN R + +++ +++ + RQ +
Sbjct: 1738 QENEANQMMQAKMKQQTINKDRIKEQERVKRMYEENERKVEEDRREKQRKEEERQRLAAA 1797
Query: 428 T 430
T
Sbjct: 1798 T 1798
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/61 (26%), Positives = 34/61 (55%)
Frame = +2
Query: 248 RQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVKLRQLACSE 427
++NE Q+ ++ + QQ +D K +E V Y+EN R + +++ +++ + RQ +
Sbjct: 2029 QENEANQMMQAKMKQQTINKDRIKEQERVKRMYEENERKVEEDRREKQRKEEERQRLAAA 2088
Query: 428 T 430
T
Sbjct: 2089 T 2089
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/61 (26%), Positives = 34/61 (55%)
Frame = +2
Query: 248 RQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVKLRQLACSE 427
++NE Q+ ++ + QQ +D K +E V Y+EN R + +++ +++ + RQ +
Sbjct: 2044 QENEANQMMQAKMKQQTINKDRIKEQERVKRMYEENERKVEEDRREKQRKEEERQRLAAA 2103
Query: 428 T 430
T
Sbjct: 2104 T 2104
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/61 (26%), Positives = 34/61 (55%)
Frame = +2
Query: 248 RQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVKLRQLACSE 427
++NE Q+ ++ + QQ +D K +E V Y+EN R + +++ +++ + RQ +
Sbjct: 1848 QENEANQMMQAKMKQQTINKDRIKEQERVKRMYEENERKVEEDRREKQRKEEERQRLAAA 1907
Query: 428 T 430
T
Sbjct: 1908 T 1908
>U43375-6|AAA83623.2| 515|Caenorhabditis elegans Hypothetical
protein K09C4.5 protein.
Length = 515
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 179 ILIFPIVEPY-NSGFFVVHSFCC*EFGVYFIQYL 81
I IFPIV + GFF++H F FG Y +++
Sbjct: 412 ISIFPIVYSFFGPGFFIIHVFSQFFFGAYLYRHM 445
>Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical protein
C14C10.5 protein.
Length = 1908
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +2
Query: 212 PGNQELETILINRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQL 388
P N E L+ +E L ++ +LQ +L KYK + +Y+++ F +QL
Sbjct: 1142 PANVEAAWKLLKAADETSPLYDADMLQGPSTAELEKYKNLLTEKYEKSKSNYFLLIEQL 1200
>AF125447-1|AAD12807.1| 414|Caenorhabditis elegans Hypothetical
protein Y14H12B.2 protein.
Length = 414
Score = 28.7 bits (61), Expect = 3.1
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Frame = +2
Query: 101 LQILNNKMSEQRKNPSYMAQLLEKLGWDQGIRIPL-ANPGNQELETILINRQNEIQQLKE 277
L+ L + E+ P +A L KL WD ++IPL AN + E +L KE
Sbjct: 44 LKDLFSAYKEEAGYPGTVATLRLKLRWDLAVKIPLAANFEDDEKAQMLFATST---SAKE 100
Query: 278 SFI--LQQQKREDLNKYKEFVHSEYQENTRLLFAHK 379
F+ L+++ D++ + Y ++T+L F K
Sbjct: 101 EFLKRLREKATVDVDNLQRIT---YYKSTKLEFKGK 133
>Z79756-3|CAB02121.1| 527|Caenorhabditis elegans Hypothetical
protein F53C11.4 protein.
Length = 527
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 369 LLTSSSWSRKLNYGSWLVVKQMDLIEELLT 458
LL S W+RK N+ L KQ+D I E L+
Sbjct: 94 LLDDSDWTRKTNHDDDLFGKQIDKIIEYLS 123
>U40160-1|AAA81155.3| 531|Caenorhabditis elegans Hypothetical
protein C56E10.3 protein.
Length = 531
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +2
Query: 263 QQLKESFILQQQKREDLNK-YKEFVHSEYQENTRLL-FAHKQQLEQEVKLR 409
Q + SF+LQQQK ++N+ +++ + +E + H+ +LE++ K R
Sbjct: 92 QNAEASFLLQQQKNNEMNEAVQQWAAVDVKEEKLYVDLTHETELEKQFKER 142
>AL132904-24|CAC35834.2| 459|Caenorhabditis elegans Hypothetical
protein Y111B2A.4 protein.
Length = 459
Score = 28.3 bits (60), Expect = 4.0
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 7/120 (5%)
Frame = +2
Query: 218 NQELETILINRQNEIQQLKESFILQQQKREDLNKYKEFVHS---EYQENTRLLFAHKQQL 388
N+EL E + KE Q DLN+ + + + EY+E R K+
Sbjct: 299 NKELANAYTELNEEFEGFKEQHTATQNANNDLNRRIDSLKANLIEYEE--RYEICKKESA 356
Query: 389 EQEVKLRQLACSETDGLDRGVIDCQKQCKDIGT----RVDRLQINIARLLKKADTLKSEV 556
E +L +L ++ L GV ++ +D T VD+L+ ++ + + L+S+V
Sbjct: 357 ETASQLIKLT-NDFARLKTGVDSVSQRREDCDTMVNEEVDKLRASLEETRQDREHLRSDV 415
>AC006730-6|AAX22282.1| 324|Caenorhabditis elegans Serpentine
receptor, class i protein40, isoform b protein.
Length = 324
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 248 CL*E*SLILDFRDWLMEF*CLDPILIFPIVEPYNSGFFVVH 126
C+ L+ D+ + F + PI +FPI+ Y SGF V+
Sbjct: 46 CILVFQLLCTLTDFYLTF-LMQPIPLFPIIAGYCSGFLAVY 85
>AC006730-5|AAF60478.4| 320|Caenorhabditis elegans Serpentine
receptor, class i protein40, isoform a protein.
Length = 320
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 248 CL*E*SLILDFRDWLMEF*CLDPILIFPIVEPYNSGFFVVH 126
C+ L+ D+ + F + PI +FPI+ Y SGF V+
Sbjct: 46 CILVFQLLCTLTDFYLTF-LMQPIPLFPIIAGYCSGFLAVY 85
>Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical
protein DY3.5 protein.
Length = 796
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/68 (23%), Positives = 35/68 (51%)
Frame = +2
Query: 119 KMSEQRKNPSYMAQLLEKLGWDQGIRIPLANPGNQELETILINRQNEIQQLKESFILQQQ 298
K +Q++ + QL E++ Q + A Q+ + +Q + QQ+++ + QQQ
Sbjct: 399 KQQQQQQQIAQQQQLAEQIAAQQAQQREAARLAQQQAQQAQQAQQLQ-QQIRQQQLQQQQ 457
Query: 299 KREDLNKY 322
+++ N+Y
Sbjct: 458 QQQQQNQY 465
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical
protein F35G12.8 protein.
Length = 1549
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/67 (25%), Positives = 31/67 (46%)
Frame = +2
Query: 299 KREDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVKLRQLACSETDGLDRGVIDCQKQCKD 478
K+ +L+K KE E + L +K + +Q + +++ E LD+ K+ D
Sbjct: 343 KQAELDKMKE----EMKSIAETLDTNKNEYKQSEEAQKVMIEERSKLDKNFDSLSKELSD 398
Query: 479 IGTRVDR 499
+GT R
Sbjct: 399 LGTEETR 405
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 263 QQLKESFILQQQKREDLNKYKEFVHSEYQENTRL 364
Q + E F +Q+K+E+L +KE + + E+T+L
Sbjct: 2967 QAVMEKFGEEQEKKENLKNWKEILKNPEAESTQL 3000
>AF098989-3|AAK18953.2| 569|Caenorhabditis elegans Hypothetical
protein F47G6.2 protein.
Length = 569
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 246 TGKMKFSSLKNHLYYSNKKERILISIRSLCTLNIKRILASYLLTSS 383
T ++K S+L+N L ++ + ++ + + N+K I YLLT +
Sbjct: 328 TQRVKLSALENILLIGDRVSKEVLKLIKVQAENVKIIAVGYLLTET 373
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 27.1 bits (57), Expect = 9.3
Identities = 17/96 (17%), Positives = 39/96 (40%)
Frame = +2
Query: 251 QNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVKLRQLACSET 430
Q ++++ + + + + R+DL K + + +Y E +QL+ L+ +E
Sbjct: 1238 QRDLEESQHATDSEVRSRQDLEKALKTIEVQYSELQTKADEQSRQLQDFAALKNRLNNEN 1297
Query: 431 DGLDRGVIDCQKQCKDIGTRVDRLQINIARLLKKAD 538
L+R + + Q + LQ + + D
Sbjct: 1298 SDLNRSLEEMDNQLNSLHRLKSTLQSQLDETRRNYD 1333
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 27.1 bits (57), Expect = 9.3
Identities = 23/72 (31%), Positives = 32/72 (44%)
Frame = +2
Query: 227 LETILINRQNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVKL 406
L TIL+ QN + I QK E + K + + SEY+EN L ++ E K
Sbjct: 845 LMTILLISQNSPSDIT---ISTHQKLEQVGKKLKQLLSEYEENQNALDEQRKITEALEKR 901
Query: 407 RQLACSETDGLD 442
Q + S D D
Sbjct: 902 LQASESARDAPD 913
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 27.1 bits (57), Expect = 9.3
Identities = 17/96 (17%), Positives = 39/96 (40%)
Frame = +2
Query: 251 QNEIQQLKESFILQQQKREDLNKYKEFVHSEYQENTRLLFAHKQQLEQEVKLRQLACSET 430
Q ++++ + + + + R+DL K + + +Y E +QL+ L+ +E
Sbjct: 1238 QRDLEESQHATDSEVRSRQDLEKALKTIEVQYSELQTKADEQSRQLQDFAALKNRLNNEN 1297
Query: 431 DGLDRGVIDCQKQCKDIGTRVDRLQINIARLLKKAD 538
L+R + + Q + LQ + + D
Sbjct: 1298 SDLNRSLEEMDNQLNSLHRLKSTLQSQLDETRRNYD 1333
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,250,225
Number of Sequences: 27780
Number of extensions: 213605
Number of successful extensions: 758
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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