BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15j06
(614 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070180-1|AAH70180.1| 336|Homo sapiens G protein-coupled recep... 32 1.4
AL627402-8|CAH71243.1| 336|Homo sapiens G protein-coupled recep... 32 1.4
AJ319076-1|CAC87490.1| 336|Homo sapiens nucleotide-/nucleoside ... 32 1.4
AF411111-1|AAL26482.1| 336|Homo sapiens G protein-coupled recep... 32 1.4
AB083622-1|BAB89335.2| 321|Homo sapiens putative G-protein coup... 32 1.4
AB083595-1|BAB89308.1| 336|Homo sapiens putative G-protein coup... 32 1.4
AB065935-1|BAC06150.1| 336|Homo sapiens seven transmembrane hel... 32 1.4
>BC070180-1|AAH70180.1| 336|Homo sapiens G protein-coupled receptor
82 protein.
Length = 336
Score = 32.3 bits (70), Expect = 1.4
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 11 VNNVSTVHIHKKHKNT*NILECESEKYLSVYFLK 112
+ ++ HI+ H T N+L C + ++S+YFLK
Sbjct: 44 IGKKTSTHIYLSHLVTANLLVCSAMPFMSIYFLK 77
>AL627402-8|CAH71243.1| 336|Homo sapiens G protein-coupled receptor
82 protein.
Length = 336
Score = 32.3 bits (70), Expect = 1.4
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 11 VNNVSTVHIHKKHKNT*NILECESEKYLSVYFLK 112
+ ++ HI+ H T N+L C + ++S+YFLK
Sbjct: 44 IGKKTSTHIYLSHLVTANLLVCSAMPFMSIYFLK 77
>AJ319076-1|CAC87490.1| 336|Homo sapiens nucleotide-/nucleoside
receptor protein.
Length = 336
Score = 32.3 bits (70), Expect = 1.4
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 11 VNNVSTVHIHKKHKNT*NILECESEKYLSVYFLK 112
+ ++ HI+ H T N+L C + ++S+YFLK
Sbjct: 44 IGKKTSTHIYLSHLVTANLLVCSAMPFMSIYFLK 77
>AF411111-1|AAL26482.1| 336|Homo sapiens G protein-coupled receptor
protein.
Length = 336
Score = 32.3 bits (70), Expect = 1.4
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 11 VNNVSTVHIHKKHKNT*NILECESEKYLSVYFLK 112
+ ++ HI+ H T N+L C + ++S+YFLK
Sbjct: 44 IGKKTSTHIYLSHLVTANLLVCSAMPFMSIYFLK 77
>AB083622-1|BAB89335.2| 321|Homo sapiens putative G-protein coupled
receptor protein.
Length = 321
Score = 32.3 bits (70), Expect = 1.4
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 11 VNNVSTVHIHKKHKNT*NILECESEKYLSVYFLK 112
+ ++ HI+ H T N+L C + ++S+YFLK
Sbjct: 44 IGKKTSTHIYLSHLVTANLLVCSAMPFMSIYFLK 77
>AB083595-1|BAB89308.1| 336|Homo sapiens putative G-protein coupled
receptor protein.
Length = 336
Score = 32.3 bits (70), Expect = 1.4
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 11 VNNVSTVHIHKKHKNT*NILECESEKYLSVYFLK 112
+ ++ HI+ H T N+L C + ++S+YFLK
Sbjct: 44 IGKKTSTHIYLSHLVTANLLVCSAMPFMSIYFLK 77
>AB065935-1|BAC06150.1| 336|Homo sapiens seven transmembrane helix
receptor protein.
Length = 336
Score = 32.3 bits (70), Expect = 1.4
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 11 VNNVSTVHIHKKHKNT*NILECESEKYLSVYFLK 112
+ ++ HI+ H T N+L C + ++S+YFLK
Sbjct: 44 IGKKTSTHIYLSHLVTANLLVCSAMPFMSIYFLK 77
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,117,876
Number of Sequences: 237096
Number of extensions: 772776
Number of successful extensions: 1023
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1023
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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