Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15j01
         (519 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0659 - 25976268-25976419,25976486-25976675,25981350-259819...    27   6.8  
03_05_0060 + 20363857-20365359                                         27   6.8  

>11_06_0659 -
           25976268-25976419,25976486-25976675,25981350-25981967,
           25982021-25982248,25982557-25982763
          Length = 464

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = -3

Query: 331 PIAIVALSKAAIGRGGWPIANTASYGVWKIIGYVLLDCKLXPEILRCST 185
           P  +  ++   I  G + +     +G+WK  GY L    L P  +  ST
Sbjct: 336 PAVLAEVTPPFIEVGEFGLVKRLQFGLWKCFGYQLAAMVLRPTYMSVST 384


>03_05_0060 + 20363857-20365359
          Length = 500

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = -2

Query: 206 RDPPLQH--GVQFXVELQGDGHPLQPPRIADITVCNLLIA 93
           R PPL    GV     L   GHPL   R+A + + NL +A
Sbjct: 36  RRPPLDTAVGVTVLQHLMEAGHPLNSTRVARLGLRNLAVA 75


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,610,999
Number of Sequences: 37544
Number of extensions: 183215
Number of successful extensions: 412
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)