Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15i23
(630 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC306.08c |||malate dehydrogenase|Schizosaccharomyces pombe|ch... 79 7e-16
SPAC186.08c |||L-lactate dehydrogenase |Schizosaccharomyces pomb... 47 3e-06
SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces ... 27 1.7
SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated prote... 27 2.2
SPAC607.10 |spo3||sporulation protein Spo3|Schizosaccharomyces p... 27 2.2
SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase ... 27 2.2
SPBC17D11.04c |||histone acetyltransferase complex subunit Nto1 ... 27 3.0
SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase Ogm4|Schizo... 26 5.2
SPAC1610.04 |mug99||meiotically upregulated gene Mug99|Schizosac... 25 6.8
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ... 25 9.0
>SPCC306.08c |||malate dehydrogenase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 341
Score = 78.6 bits (185), Expect = 7e-16
Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Frame = +1
Query: 211 RNVQVSVIGAASDIGSYVSLFLKRNSKVSKLHLYDDDDRIKGTELELSNLPGGPSVSAFI 390
R +V+V+GA IG +S+ LK N KVS+L L+D G ++ ++ +V +
Sbjct: 27 RAFKVAVLGAGGGIGQPLSMLLKLNDKVSELALFDIRGA-PGVAADIGHINTTSNVVGYA 85
Query: 391 -GDTNLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAAQNQEAFVAIS 567
D LE+A++ +++V++ + +PRKPG TR+ + NA +++ L A EA +
Sbjct: 86 PDDKGLEKALNGADVVIIPAGVPRKPGMTRDDLFATNASIVRDLAFAAGETCPEAKYLVV 145
Query: 568 TNPINYLIPFASTVMYKYGXY 630
TNP+N +P + + G +
Sbjct: 146 TNPVNSTVPIFKKALERVGVH 166
>SPAC186.08c |||L-lactate dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 330
Score = 46.8 bits (106), Expect = 3e-06
Identities = 26/128 (20%), Positives = 68/128 (53%), Gaps = 2/128 (1%)
Frame = +1
Query: 211 RNVQVSVIGAASDIGSYVSLFLKRNSKVSKLHLYD-DDDRIKGTELELSNL-PGGPSVSA 384
+++++ ++GA + +GS + L + +++ + D + + +G ++L++ P
Sbjct: 19 KSIKIVIVGAGN-VGSTTAFTLLLSGLAAEIVIIDLNKKKAEGEAMDLNHAAPLSHETRV 77
Query: 385 FIGDTNLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAAQNQEAFVAI 564
++GD + + VV+ + +KPG TR +L AN + + + + + ++A + +
Sbjct: 78 YLGDY---KDCKDATAVVITAGKNQKPGETRMDLLKANISIFKEILREVTKYTKDAILLV 134
Query: 565 STNPINYL 588
+TNP++ L
Sbjct: 135 ATNPVDVL 142
>SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 615
Score = 27.5 bits (58), Expect = 1.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 144 GPKNILLFICNAAKEKHTDLTKKKCTSIC 230
G K + F CN KEK D T SIC
Sbjct: 23 GDKTVTCFYCNKKKEKIRDGTSTWTCSIC 51
>SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated protein
Mug36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1646
Score = 27.1 bits (57), Expect = 2.2
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 475 REQMLGANAPLIQ-RLCKAIAAQNQEAFVAISTNPINYLIPFASTVMY 615
RE ++G N ++ +L + + + E +++NP+N I A TV+Y
Sbjct: 860 RESIIGLNPRTLEAKLLLYLKSLDVEIDALVASNPLNIRIMAAETVVY 907
>SPAC607.10 |spo3||sporulation protein Spo3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1028
Score = 27.1 bits (57), Expect = 2.2
Identities = 19/81 (23%), Positives = 40/81 (49%)
Frame = +1
Query: 181 LKKNTLILQKRNVQVSVIGAASDIGSYVSLFLKRNSKVSKLHLYDDDDRIKGTELELSNL 360
+KK +++ KR+ +++ + A S GS+ L +S +S L +D + G + +
Sbjct: 216 IKKPSMVDHKRDSEINAVTAVSADGSFSPLTETLSSTISTL----SNDSLDGLSSQKNEF 271
Query: 361 PGGPSVSAFIGDTNLEQAIHS 423
G S S +I + ++ +S
Sbjct: 272 TGFNSNSEWIPNDTVDYICNS 292
>SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase
Cho2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 905
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = -2
Query: 233 ITDTCTFLFCKISVFFFSCVANKQQNIFWAIFFQYFCKICFLTSHFTIFVTF 78
I+D + S+F +N + FWAIF + + FL S F+ F
Sbjct: 380 ISDVALLIIALYSIFIILLSSNSHYSQFWAIFQAFVWR--FLHSIIHAFILF 429
>SPBC17D11.04c |||histone acetyltransferase complex subunit Nto1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 26.6 bits (56), Expect = 3.0
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = -2
Query: 194 VFFFSCVANKQQNIFWAIFF---QYFCKICFLTSHFTIFVTF 78
VF +C + QN + F Q+FCK C L H I F
Sbjct: 212 VFCDNCNTSVHQNCYGIPFVPEGQWFCKKCLLAPHEVICCAF 253
>SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase
Ogm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 25.8 bits (54), Expect = 5.2
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 152 FWA-IFFQYFCKICFLTSHFTIFVTFLLRGHDIC 54
+WA +FF F C +++ + F TFL G +C
Sbjct: 228 WWAWLFFTGFFLSCTISTKYVGFFTFLSIGLSVC 261
>SPAC1610.04 |mug99||meiotically upregulated gene
Mug99|Schizosaccharomyces pombe|chr 1|||Manual
Length = 526
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 277 KRNSKVSKLHLYDDDDRIKGTELELSNLPGG 369
+RN++ S HL+ D ++ LE+ +LP G
Sbjct: 129 ERNARYSTSHLFLPSDFLQVNNLEIIHLPPG 159
>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1502
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 328 IKGTELELSNLPGGPSVSAF 387
IK L+L +LP P+VS+F
Sbjct: 6 IKAASLDLESLPSQPTVSSF 25
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,613,269
Number of Sequences: 5004
Number of extensions: 54830
Number of successful extensions: 130
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 279695522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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