Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15i17
         (656 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              25   0.64 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   1.5  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    24   1.5  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              22   5.9  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   7.8  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    21   7.8  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +2

Query: 533 VQAMAWRPDGKALAIGYNLGIIYTVSVEDKGI 628
           ++ ++W  DGK L +   +  I +V  EDKG+
Sbjct: 336 IKTVSWLKDGKPLGLEEAVLRIESVKKEDKGM 367


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 41  QPNFLTLESENNLMLTHVYIDY 106
           QP  + +E+  NL +T  Y DY
Sbjct: 279 QPKHMLIEAYTNLSMTMKYYDY 300


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 41  QPNFLTLESENNLMLTHVYIDY 106
           QP  + +E+  NL +T  Y DY
Sbjct: 279 QPKHMLIEAYTNLSMTMKYYDY 300


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +2

Query: 392 VPYQVDLMVWSNRLDLL 442
           VPY  + +++S R+D+L
Sbjct: 143 VPYITNFIIYSKRMDVL 159


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +2

Query: 230 VNYDQSLNS-NITYDINHNTADAEPSIVNIVAQSSTCDLTTSKM 358
           +N  Q L    I +DI  NT   + ++V +  Q  +C++  S +
Sbjct: 157 LNTSQLLKQVKIPHDIAVNTTTEKGALVTLSVQLLSCEVNGSTL 200


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 569 LAIGYNLGIIYTVSVEDKGIIDKYELELE 655
           L  GY  GI+Y +S  +   +DK E +LE
Sbjct: 483 LGDGYGAGIVYHLSKAELDKMDK-EKKLE 510


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,604
Number of Sequences: 438
Number of extensions: 4472
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)