Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15i02
(423 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_04_0008 + 15041682-15041909,15042035-15042319,15042406-150427... 31 0.38
03_02_0996 - 13082540-13082818,13083107-13083221,13084135-130842... 31 0.51
10_02_0155 + 5937974-5939419,5939678-5939867,5940895-5941022 30 0.88
07_03_1614 + 28152812-28153204,28153301-28153585,28153676-281539... 29 2.0
01_01_0710 + 5492389-5492745,5493664-5493948,5494121-5494438,549... 29 2.0
10_08_0894 - 21365629-21365766,21365849-21365950,21366042-213662... 28 2.7
02_02_0009 + 6068260-6068591,6068797-6068917,6069034-6069122,606... 28 2.7
11_06_0233 + 21565233-21566053,21566840-21567890,21568075-215687... 27 4.7
09_04_0530 + 18365154-18365200,18365231-18365762,18365836-183659... 27 4.7
02_05_0555 - 29937973-29938395,29938509-29938790 27 4.7
09_02_0229 - 6062825-6064899,6064943-6065432,6065479-6065956,606... 27 8.2
05_04_0084 - 17788077-17789240 27 8.2
02_02_0181 + 7541831-7541971,7542407-7543279,7544101-7544301,754... 27 8.2
01_05_0309 - 20713774-20713818,20713838-20713915,20714044-207142... 27 8.2
01_01_1145 + 9073973-9074281,9075440-9075998,9076088-9076241,907... 27 8.2
>01_04_0008 +
15041682-15041909,15042035-15042319,15042406-15042723,
15044087-15044128,15045111-15045391,15045808-15045883,
15046196-15046296,15047971-15048088,15048872-15049186
Length = 587
Score = 31.1 bits (67), Expect = 0.38
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +2
Query: 86 EEIEKFYKACQLHREFYKGYSKSPHPLDYFNESPYKWQCPPEISPIYLSFPP 241
E++ K +K C E Y SK PH + + PYK +C I + FPP
Sbjct: 293 EQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQPYK-RC---IREAFKDFPP 340
>03_02_0996 -
13082540-13082818,13083107-13083221,13084135-13084235,
13084890-13085117,13085789-13086106,13086200-13086484,
13086566-13086913
Length = 557
Score = 30.7 bits (66), Expect = 0.51
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +2
Query: 86 EEIEKFYKACQLHREFYKGYSKSPHPLDYFNESPYKWQCPPEISPIYLSFP 238
E++ K +K C E Y SK PH + + PYK IS Y FP
Sbjct: 319 EQLHKIFKLCGSPTEEYWKKSKLPHATIFKPQQPYK----RRISETYKDFP 365
>10_02_0155 + 5937974-5939419,5939678-5939867,5940895-5941022
Length = 587
Score = 29.9 bits (64), Expect = 0.88
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 7/87 (8%)
Frame = +2
Query: 113 CQLHREFYKGYSKSPHPLDYFNE-SPYKWQCPPEISPIYLSFP-----PYHIKYKSPAAL 274
C+ GY++ P LD+ N+ +P+ PP P+ P PY + SP
Sbjct: 21 CRTKHSLTAGYARGPGRLDWANQPNPFLRFSPPSQIPLPNPPPGIAGIPYPSLFHSPPPP 80
Query: 275 PTSTGRTID-IPALPHRSLAGRFNKSA 352
P+ ++D + AL SLA KSA
Sbjct: 81 PSPQPLSVDSLSALLFHSLALSAWKSA 107
>07_03_1614 +
28152812-28153204,28153301-28153585,28153676-28153993,
28154657-28154884,28155390-28155490,28156204-28156321,
28156445-28156726
Length = 574
Score = 28.7 bits (61), Expect = 2.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 86 EEIEKFYKACQLHREFYKGYSKSPHPLDYFNESPYK 193
E++ K +K C E Y SK PH + + PYK
Sbjct: 334 EQLHKIFKLCGSPTEEYWKKSKLPHATIFKPQQPYK 369
>01_01_0710 +
5492389-5492745,5493664-5493948,5494121-5494438,
5494900-5495127,5495884-5495984,5496493-5496604,
5496654-5496662,5496897-5497340,5497649-5497909
Length = 704
Score = 28.7 bits (61), Expect = 2.0
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +2
Query: 86 EEIEKFYKACQLHREFYKGYSKSPHPLDYFNESPYKWQCPPEISPIYLSFPP 241
E++ K +K C E Y SK PH + + PY +S + FPP
Sbjct: 322 EQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQHPY----ARRVSETFKDFPP 369
>10_08_0894 -
21365629-21365766,21365849-21365950,21366042-21366284,
21366685-21366813,21366999-21367103,21367196-21367387,
21367486-21367639,21368148-21368209,21368291-21368437,
21368517-21368564,21369091-21369228,21369305-21369451,
21370579-21370665,21370754-21370861,21370941-21371041,
21371870-21371996,21372820-21372936,21373029-21373106,
21373240-21373284,21373637-21373756,21373838-21373964,
21374033-21374253,21374347-21374529,21374772-21374924,
21375051-21375146,21375226-21375331,21375410-21375492,
21375576-21375728,21375819-21376058,21376367-21376414,
21376782-21376928,21377007-21377115,21377200-21377345,
21377715-21377809,21377944-21378049,21378177-21378368,
21378456-21378686,21378772-21378866,21379426-21379529,
21380040-21380284,21380300-21380347,21380376-21380480,
21380630-21380767,21381458-21381649,21381738-21381914,
21382001-21382129,21382203-21382316,21382407-21382746,
21382836-21383064,21383155-21383455,21384311-21384358,
21387963-21388355
Length = 2493
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 89 LLGVEHLKTKYNLPS*KFYSYIFQKVIK 6
LLGV H+ T YNL + S +F ++K
Sbjct: 570 LLGVSHINTPYNLLQYEVLSCVFPMILK 597
>02_02_0009 + 6068260-6068591,6068797-6068917,6069034-6069122,
6069207-6069291,6069421-6069580,6069667-6069743,
6069848-6069898,6069979-6070069,6070167-6070468,
6070549-6070830,6070911-6071388,6071457-6071560,
6071647-6071809,6071895-6072017,6072099-6072217,
6072304-6072636,6072713-6073003,6073088-6073171,
6073260-6073393,6073478-6073705,6073795-6073966,
6074062-6074316,6074408-6074668
Length = 1444
Score = 28.3 bits (60), Expect = 2.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 285 VDVGNAAGDLYLI*YGGKLKYIGEISGGHCHL 190
+D+ A +L+L+ GG+ Y+G + CHL
Sbjct: 1059 IDIFEAFDELFLMKRGGEEIYVGPLGHNSCHL 1090
>11_06_0233 +
21565233-21566053,21566840-21567890,21568075-21568758,
21568927-21569019,21571815-21571835
Length = 889
Score = 27.5 bits (58), Expect = 4.7
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 93 LKNSIRLVNCTGNFTRVIRKVHILWIISMRAHIN 194
LK + L+NC G + + +V + W ++ AH N
Sbjct: 808 LKKVLILLNCEGETAKQVEEVVVAWEHTVHAHPN 841
>09_04_0530 +
18365154-18365200,18365231-18365762,18365836-18365933,
18366026-18366271,18366615-18366729,18366844-18367057,
18367211-18367824
Length = 621
Score = 27.5 bits (58), Expect = 4.7
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 194 WQCPPEISPIYLSFPPYHIKYKSPA-ALPTSTGRTIDIPALP 316
+ CPP P L++P + + + SP+ A T T R ++ A P
Sbjct: 493 YACPPARRPEDLNYPSFALPHLSPSGAARTVTRRVRNVGAAP 534
>02_05_0555 - 29937973-29938395,29938509-29938790
Length = 234
Score = 27.5 bits (58), Expect = 4.7
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +2
Query: 158 HPLDYFNESPYKWQCPPEISPIYLSFPPYHIKYKSPAALP 277
H + + E W +PI +PPY + +P A+P
Sbjct: 151 HEYEAYEEKARAWTQKHSSTPIVSHYPPYAVIGSTPPAVP 190
>09_02_0229 -
6062825-6064899,6064943-6065432,6065479-6065956,
6066333-6066382,6068917-6069172,6069358-6069503
Length = 1164
Score = 26.6 bits (56), Expect = 8.2
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 285 LDEPLIYQPCHTA-L*LVDLISQHAKLLFVKLNTNETIKE*LFP 413
+ +P++ C L L + Q+ KL F ++NT E I E LFP
Sbjct: 833 ISKPMLKSKCFLRHLILSCTMPQYKKLSFEEINTIEAIFEGLFP 876
>05_04_0084 - 17788077-17789240
Length = 387
Score = 26.6 bits (56), Expect = 8.2
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +2
Query: 62 LFLDVLRQEEIEKFY-KACQLHREFYKGYSKS 154
LF D L Q +FY A HR +Y+G SKS
Sbjct: 41 LFFDALVQLIPPRFYLSAADEHRPWYQGLSKS 72
>02_02_0181 +
7541831-7541971,7542407-7543279,7544101-7544301,
7544358-7544595,7545732-7545922
Length = 547
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 122 HREFYKGYSKSPHPLDYFNESPYKWQCPPE 211
H E++KG+ H DYF E + W+ E
Sbjct: 120 HEEWHKGFG---HNGDYFPEDEFNWEIDEE 146
>01_05_0309 -
20713774-20713818,20713838-20713915,20714044-20714222,
20714296-20714556,20715222-20715393,20715501-20715662,
20716435-20716863,20717729-20717785,20717872-20718842,
20719098-20719182,20719269-20719637,20719756-20720001,
20720090-20720362,20720663-20720827,20721328-20721556,
20721727-20722168,20723152-20724138,20724352-20724517,
20725070-20725728,20725820-20726186
Length = 2113
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 203 PPEISPIYLSFPPYHIKYKSPAALPTSTGRTIDIPALP 316
P E+ P+ L+ P H+ +PAA P + D+ LP
Sbjct: 4 PDELPPLPLALHPPHLIPPAPAADPRALSFLPDLGGLP 41
>01_01_1145 +
9073973-9074281,9075440-9075998,9076088-9076241,
9077475-9077565,9077722-9077793,9077879-9078390,
9078854-9078923,9079514-9079579,9080266-9080570,
9080872-9081006,9081141-9081204,9081429-9081574,
9081669-9081773,9082310-9082490
Length = 922
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +2
Query: 125 REFYKGYSKSPHPLDYFNESPYKWQCPP 208
R F + + PH L Y N PY PP
Sbjct: 267 RAFMRPMAHLPHTLGYINGPPYPGPMPP 294
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,316,209
Number of Sequences: 37544
Number of extensions: 251858
Number of successful extensions: 611
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 778540620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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