Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15i02
         (423 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80027-9|AAC48125.1|  199|Caenorhabditis elegans Hypothetical pr...    32   0.15 
AC024777-5|AAF60564.1|  506|Caenorhabditis elegans Hypothetical ...    31   0.34 
Z82288-1|CAB05322.2|  479|Caenorhabditis elegans Hypothetical pr...    29   1.8  
Z50741-1|CAA90609.1|  395|Caenorhabditis elegans Hypothetical pr...    28   3.2  
AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical ...    28   3.2  
AC006661-9|AAF39885.1|  337|Caenorhabditis elegans Hypothetical ...    27   4.2  
U80842-4|AAB37950.3|  322|Caenorhabditis elegans Serpentine rece...    27   5.5  
U64857-7|AAC25861.2|  373|Caenorhabditis elegans Groundhog (hedg...    27   7.3  
U64844-8|AAB18308.1|  330|Caenorhabditis elegans Serpentine rece...    27   7.3  
AF101304-2|AAN60536.1| 1123|Caenorhabditis elegans Hypothetical ...    27   7.3  
AF101304-1|AAC69200.2| 1121|Caenorhabditis elegans Hypothetical ...    27   7.3  
CU457741-1|CAM36342.1|  347|Caenorhabditis elegans Hypothetical ...    26   9.7  

>U80027-9|AAC48125.1|  199|Caenorhabditis elegans Hypothetical
           protein T28A11.16 protein.
          Length = 199

 Score = 32.3 bits (70), Expect = 0.15
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +2

Query: 32  YRISTMVNYILFLDVLRQEEIEKFYKAC 115
           YR    +  + FLDV +Q+ +EKF+K+C
Sbjct: 53  YRFGDFMAKMYFLDVTKQKSLEKFHKSC 80


>AC024777-5|AAF60564.1|  506|Caenorhabditis elegans Hypothetical
           protein Y42H9AR.1 protein.
          Length = 506

 Score = 31.1 bits (67), Expect = 0.34
 Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
 Frame = +2

Query: 125 REFYKGYSKSPHPLDYFNESPYKWQCPPEISP--IYLSF-PPYHIKYKSPAALPTSTGRT 295
           +++ + YS++  P+DY+ +   +    P ++P   Y ++ PP    Y  PAA   S    
Sbjct: 349 QQYQQSYSQAQPPVDYYQQQQQQQAYQPPVNPPTSYQAYQPPVPTSYYPPAASTASNSSG 408

Query: 296 IDIP 307
              P
Sbjct: 409 YQAP 412


>Z82288-1|CAB05322.2|  479|Caenorhabditis elegans Hypothetical
           protein ZK896.1 protein.
          Length = 479

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = -2

Query: 173 NNPKDVDFSNNPCKIPGAVDKPYRIFQFLLGVEHLKTKYNLPS*KFYSYIF 21
           N   D  +SN+   IP      Y IF    G  +L  K   P+  ++SY+F
Sbjct: 307 NKLSDYSYSNSQTNIPQKFVGNYTIFVLDKGQANLSLKTYTPNNAWWSYVF 357


>Z50741-1|CAA90609.1|  395|Caenorhabditis elegans Hypothetical
           protein F55G7.1 protein.
          Length = 395

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = +2

Query: 53  NYILFLDVLRQEEIEKFYKACQLHREFYKGYSKSPHP--LDYFNESPYKWQCPPEISPIY 226
           N ++   VLRQ ++EK  +  +L+  + +   +  +P  L  FN+       PP    + 
Sbjct: 4   NRVINDPVLRQYQLEKCREELRLYEGYCRARQQFGYPVELPQFNDYGQVINLPPNFRRVP 63

Query: 227 LSFPPYHI 250
            S  P H+
Sbjct: 64  FSSQPQHV 71


>AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical
           protein Y45G5AM.2 protein.
          Length = 1061

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +2

Query: 26  YSYRISTMVNYILFLDVLRQEEIEKFYKACQ-LHREFYKGYSKSPHPLDYFN 178
           YSY   TM +  LF+D  R  ++ K Y A Q +  + YK  + SP+  D+ +
Sbjct: 672 YSYLFITMSDVRLFIDAKRLNDVSKAYFARQSIDVDDYK--AASPYIYDWIS 721


>AC006661-9|AAF39885.1|  337|Caenorhabditis elegans Hypothetical
           protein H20J04.7 protein.
          Length = 337

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +3

Query: 57  IFCF*MFYAKKKLKNSIRLVNCTGNFTRVIRKVHILWIIS 176
           I C+ + Y  K+ KN   L+N T N +R  + VHI  +I+
Sbjct: 219 IICYMILYYLKRQKNKKVLINTT-NMSREEKSVHIEILIT 257


>U80842-4|AAB37950.3|  322|Caenorhabditis elegans Serpentine
           receptor, class i protein53 protein.
          Length = 322

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 3/20 (15%)
 Frame = -3

Query: 226 IYRRNFWWTLP---FIWALI 176
           IYRRN W T+    FIWA I
Sbjct: 184 IYRRNIWMTISTILFIWAFI 203


>U64857-7|AAC25861.2|  373|Caenorhabditis elegans Groundhog
           (hedgehog-like family)protein 8 protein.
          Length = 373

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
 Frame = +2

Query: 122 HREFYKGYSKSPHPLDYFNESPYKWQCPP--EISPIYLSFPPYHIKYKSPAALPTSTG 289
           + E+ +  +  PHP+D ++  P     PP   + P  + +    I    P   P S G
Sbjct: 89  YAEYKQAMAPQPHPVDAYSPPPPAPMVPPVTVVEPPAMPYEMTTIASVGPLTTPASVG 146


>U64844-8|AAB18308.1|  330|Caenorhabditis elegans Serpentine
           receptor, class h protein213 protein.
          Length = 330

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 8/34 (23%), Positives = 19/34 (55%)
 Frame = -2

Query: 296 WFVQSMLVTLLVIYT*YDMVENLNISEKFLVDIA 195
           WF+   +V  +  +  Y M+ +  +++ F++ IA
Sbjct: 140 WFITHFIVATVFFFPAYQMIPDQQLAKNFVISIA 173


>AF101304-2|AAN60536.1| 1123|Caenorhabditis elegans Hypothetical
           protein C02E11.1b protein.
          Length = 1123

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 182 SH*NNPKDVDFSNNPCKI 129
           SH N PK ++FS NP K+
Sbjct: 273 SHVNGPKSINFSPNPQKV 290


>AF101304-1|AAC69200.2| 1121|Caenorhabditis elegans Hypothetical
           protein C02E11.1a protein.
          Length = 1121

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 182 SH*NNPKDVDFSNNPCKI 129
           SH N PK ++FS NP K+
Sbjct: 271 SHVNGPKSINFSPNPQKV 288


>CU457741-1|CAM36342.1|  347|Caenorhabditis elegans Hypothetical
           protein C42C1.1 protein.
          Length = 347

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = -2

Query: 134 KIPGAVDKPYRIFQFLLGVEHLKTKYNLP 48
           KIPG  D  Y  FQFL    HL+T    P
Sbjct: 82  KIPGGYDYDYPTFQFL---HHLRTSTVFP 107


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,168,104
Number of Sequences: 27780
Number of extensions: 230373
Number of successful extensions: 588
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)