Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15h22
         (585 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC029519-1|AAH29519.1|  276|Homo sapiens chromosome 6 open readi...    80   5e-15
AL136131-2|CAC19508.1|  276|Homo sapiens chromosome 6 open readi...    80   5e-15
AL136131-3|CAI19961.1|  306|Homo sapiens chromosome 6 open readi...    67   4e-11
AK055407-1|BAB70918.1|  306|Homo sapiens protein ( Homo sapiens ...    67   4e-11
AL136131-4|CAI19962.1|  132|Homo sapiens chromosome 6 open readi...    44   4e-04

>BC029519-1|AAH29519.1|  276|Homo sapiens chromosome 6 open reading
           frame 206 protein.
          Length = 276

 Score = 80.2 bits (189), Expect = 5e-15
 Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
 Frame = +2

Query: 95  EYVNVNGATLNSEIISLLQNSLTVLQVENHFTIVQYWGQIYATDLDYYIAVGLTNDALTG 274
           E  + +G  L+ +  + L  SL +++ +  +  V +WG+I     DYYIA GL+ D L  
Sbjct: 11  ELASGSGQGLSPDRRASLLTSLMLVKRDYRYDRVLFWGRILGLVADYYIAQGLSEDQLAP 70

Query: 275 KKYFYTTDFQFWSLLPRPKKKYKELSLITTFPFRGDPS-----LKIKVLDESFEENHPDR 439
           +K  Y+ +   WSLLP   ++    S +    F GDPS      +++ ++E  +    + 
Sbjct: 71  RKTLYSLNCTEWSLLPPATEEMVAQSSVVKGRFMGDPSYEYEHTELQKVNEGEKVFEEEI 130

Query: 440 CRFMKEENRLAATISNICEEVEICARGQLIKRPDGSITINPNFYGLT 580
              +KEE RL + I  I + V I  RG L K P G   +N  F GL+
Sbjct: 131 VVQIKEETRLVSVIDQIDKAVAIIPRGALFKTPFGPTHVNRTFEGLS 177


>AL136131-2|CAC19508.1|  276|Homo sapiens chromosome 6 open reading
           frame 206 protein.
          Length = 276

 Score = 80.2 bits (189), Expect = 5e-15
 Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
 Frame = +2

Query: 95  EYVNVNGATLNSEIISLLQNSLTVLQVENHFTIVQYWGQIYATDLDYYIAVGLTNDALTG 274
           E  + +G  L+ +  + L  SL +++ +  +  V +WG+I     DYYIA GL+ D L  
Sbjct: 11  ELASGSGQGLSPDRRASLLTSLMLVKRDYRYDRVLFWGRILGLVADYYIAQGLSEDQLAP 70

Query: 275 KKYFYTTDFQFWSLLPRPKKKYKELSLITTFPFRGDPS-----LKIKVLDESFEENHPDR 439
           +K  Y+ +   WSLLP   ++    S +    F GDPS      +++ ++E  +    + 
Sbjct: 71  RKTLYSLNCTEWSLLPPATEEMVAQSSVVKGRFMGDPSYEYEHTELQKVNEGEKVFEEEI 130

Query: 440 CRFMKEENRLAATISNICEEVEICARGQLIKRPDGSITINPNFYGLT 580
              +KEE RL + I  I + V I  RG L K P G   +N  F GL+
Sbjct: 131 VVQIKEETRLVSVIDQIDKAVAIIPRGALFKTPFGPTHVNRTFEGLS 177


>AL136131-3|CAI19961.1|  306|Homo sapiens chromosome 6 open reading
           frame 206 protein.
          Length = 306

 Score = 67.3 bits (157), Expect = 4e-11
 Identities = 49/162 (30%), Positives = 75/162 (46%)
 Frame = +2

Query: 95  EYVNVNGATLNSEIISLLQNSLTVLQVENHFTIVQYWGQIYATDLDYYIAVGLTNDALTG 274
           E  + +G  L+ +  + L  SL +++ +  +  V +WG+I     DYYIA GL+ D L  
Sbjct: 11  ELASGSGQGLSPDRRASLLTSLMLVKRDYRYDRVLFWGRILGLVADYYIAQGLSEDQLAP 70

Query: 275 KKYFYTTDFQFWSLLPRPKKKYKELSLITTFPFRGDPSLKIKVLDESFEENHPDRCRFMK 454
           +K  Y+ +   WSLLP   ++    S +    F GDP         S+E  H +  +  +
Sbjct: 71  RKTLYSLNCTEWSLLPPATEEMVAQSSVVKGRFMGDP---------SYEYEHTELQKVNE 121

Query: 455 EENRLAATISNICEEVEICARGQLIKRPDGSITINPNFYGLT 580
            E      I  I + V I  RG L K P G   +N  F GL+
Sbjct: 122 GEKVFEEEIV-IDKAVAIIPRGALFKTPFGPTHVNRTFEGLS 162


>AK055407-1|BAB70918.1|  306|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30845 fis, clone FEBRA2002727. ).
          Length = 306

 Score = 67.3 bits (157), Expect = 4e-11
 Identities = 49/162 (30%), Positives = 75/162 (46%)
 Frame = +2

Query: 95  EYVNVNGATLNSEIISLLQNSLTVLQVENHFTIVQYWGQIYATDLDYYIAVGLTNDALTG 274
           E  + +G  L+ +  + L  SL +++ +  +  V +WG+I     DYYIA GL+ D L  
Sbjct: 11  ELASGSGQGLSPDRRASLLTSLMLVKRDYRYDRVLFWGRILGLVADYYIAQGLSEDQLAP 70

Query: 275 KKYFYTTDFQFWSLLPRPKKKYKELSLITTFPFRGDPSLKIKVLDESFEENHPDRCRFMK 454
           +K  Y+ +   WSLLP   ++    S +    F GDP         S+E  H +  +  +
Sbjct: 71  RKTLYSLNCTEWSLLPPATEEMVAQSSVVKGRFMGDP---------SYEYEHTELQKVNE 121

Query: 455 EENRLAATISNICEEVEICARGQLIKRPDGSITINPNFYGLT 580
            E      I  I + V I  RG L K P G   +N  F GL+
Sbjct: 122 GEKVFEEEIV-IDKAVAIIPRGALFKTPFGPTHVNRTFEGLS 162


>AL136131-4|CAI19962.1|  132|Homo sapiens chromosome 6 open reading
           frame 206 protein.
          Length = 132

 Score = 44.0 bits (99), Expect = 4e-04
 Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
 Frame = +2

Query: 308 WSLLPRPKKKYKELSLITTFPFRGDPS-----LKIKVLDESFEENHPDRCRFMKEENRLA 472
           WSLLP   ++    S +    F GDPS      +++ ++E  +    +    +KEE RL 
Sbjct: 6   WSLLPPATEEMVAQSSVVKGRFMGDPSYEYEHTELQKVNEGEKVFEEEIVVQIKEETRLV 65

Query: 473 ATISNICEEVEICARGQLIKRPDGSITINPNFYG 574
           + I  I + V I  RG L K P G   +N  F G
Sbjct: 66  SVIDQIDKAVAIIPRGALFKTPFGPTHVNRTFEG 99


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,090,318
Number of Sequences: 237096
Number of extensions: 1630058
Number of successful extensions: 2813
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2812
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)