Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte15h16
(573 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 26 0.23
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 25 0.53
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 25 0.70
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 2.8
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 2.8
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 2.8
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 2.8
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 2.8
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 2.8
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 2.8
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 2.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 2.8
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 3.8
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 6.6
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 6.6
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 21 6.6
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 21 6.6
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 26.2 bits (55), Expect = 0.23
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 18 CLIS*QFSYILYEYHHKSRNNLNNYKQMDQEQNKF 122
C+I +S + + SR N+ KQ+ Q+ NK+
Sbjct: 477 CIIGKDYSLPMVNHSKSSRINIERMKQVYQQLNKY 511
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 25.0 bits (52), Expect = 0.53
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 141 LKFGIFEHIYAKSNPCSEAN--SPRKVSQSPPIDK 239
LK GI H+Y + PC +A SP + ++S +DK
Sbjct: 357 LKQGIQFHLYINTAPCGDARIFSPHEENES--VDK 389
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 24.6 bits (51), Expect = 0.70
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 321 GKTGAGVTGSRTGHASEKDSDNLPSGA-VSPGLLRHIHNA 437
G G+T RT +AS D+LP G S LR IH A
Sbjct: 254 GDALTGLTVLRTFNASYNSLDSLPEGLFASTRDLREIHLA 293
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 24 IS*QFSYILYEYHHKSRNNLNNYKQM 101
+S ++Y Y ++ + NN NNYK++
Sbjct: 85 LSNNYNYSNYN-NYNNNNNYNNYKKL 109
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 24 IS*QFSYILYEYHHKSRNNLNNYKQM 101
+S ++Y Y ++ + NN NNYK++
Sbjct: 85 LSNNYNYSNYN-NYNNNNNYNNYKKL 109
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 24 IS*QFSYILYEYHHKSRNNLNNYKQM 101
+S ++Y Y ++ + NN NNYK++
Sbjct: 85 LSNNYNYSNYN-NYNNNNNYNNYKKL 109
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 24 IS*QFSYILYEYHHKSRNNLNNYKQM 101
+S ++Y Y ++ + NN NNYK++
Sbjct: 85 LSNNYNYSNYN-NYNNNNNYNNYKKL 109
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 24 IS*QFSYILYEYHHKSRNNLNNYKQM 101
+S ++Y Y ++ + NN NNYK++
Sbjct: 85 LSNNYNYSNYN-NYNNNNNYNNYKKL 109
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 24 IS*QFSYILYEYHHKSRNNLNNYKQM 101
+S ++Y Y ++ + NN NNYK++
Sbjct: 85 LSNNYNYSNYN-NYNNNNNYNNYKKL 109
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 24 IS*QFSYILYEYHHKSRNNLNNYKQM 101
+S ++Y Y ++ + NN NNYK++
Sbjct: 85 LSNNYNYSNYN-NYNNNNNYNNYKKL 109
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 24 IS*QFSYILYEYHHKSRNNLNNYKQM 101
+S ++Y Y ++ + NN NNYK++
Sbjct: 85 LSNNYNYSNYN-NYNNNNNYNNYKKL 109
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.6 bits (46), Expect = 2.8
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +3
Query: 57 YHHKSRNNLNNYKQM 101
Y++ + NN NNYK++
Sbjct: 338 YNNYNNNNYNNYKKL 352
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.2 bits (45), Expect = 3.8
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +3
Query: 51 YEYHHKSRNNLNNYKQM 101
Y ++ + NN NNYK++
Sbjct: 101 YNNYNYNNNNYNNYKKL 117
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 211 KYHKVHRLINVPEE 252
KY H+LI +PE+
Sbjct: 523 KYDSHHKLIEIPED 536
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 211 KYHKVHRLINVPEE 252
KY H+LI +PE+
Sbjct: 523 KYDSHHKLIEIPED 536
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 193 KRIHQEKYHKVHRLINVPEETHRLKGN 273
K++ +EK + HR+ + E + LK N
Sbjct: 264 KKMQEEKIFEPHRIPQLQEVSEFLKKN 290
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +3
Query: 339 VTGSRTGHASEKDSDNLPSGAVS 407
+TG +G+A+ + D+ SGA +
Sbjct: 247 LTGGNSGNAAGNNEDSSDSGAAA 269
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,037
Number of Sequences: 438
Number of extensions: 3482
Number of successful extensions: 22
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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