Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15h10
         (310 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    22   1.5  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    22   1.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   3.4  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   3.4  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   4.5  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    20   5.9  
AB050744-1|BAB17753.1|  238|Apis mellifera period protein protein.     20   5.9  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    20   7.8  

>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 76  SYAINYVNKY*NDCGTFYRKLF 141
           +Y  NY N Y N+    Y+KL+
Sbjct: 96  NYNNNYNNNYNNNYNNNYKKLY 117


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 76  SYAINYVNKY*NDCGTFYRKLF 141
           +Y  NY N Y N+    Y+KL+
Sbjct: 96  NYNNNYNNNYNNNYNNNYKKLY 117


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +1

Query: 136 LF*CYDNSTTCRQVKCSKIRLRLMLRPP 219
           L+  Y N+    +V+C+ + L +   PP
Sbjct: 686 LYKIYLNTMESHEVRCTAVFLLMKTNPP 713


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -2

Query: 243 NAIIIMHLWWSQHQP 199
           N +I    WW ++QP
Sbjct: 68  NIVIDKRPWWERYQP 82


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 76  SYAINYVNKY*NDCGTFYRKLF 141
           +Y  NY NKY  +   + +KL+
Sbjct: 95  NYKYNYNNKYNYNNNNYNKKLY 116


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +2

Query: 107 ETIAEHFIESCFNATITLPHVD 172
           ETI      +  NAT  L HVD
Sbjct: 303 ETIISSVFTTRHNATCYLSHVD 324


>AB050744-1|BAB17753.1|  238|Apis mellifera period protein protein.
          Length = 238

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +2

Query: 107 ETIAEHFIESCFNATITLPHVD 172
           ETI      +  NAT  L HVD
Sbjct: 9   ETIISSVFTTRHNATCYLSHVD 30


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +1

Query: 88  NYVNKY*NDCGTFY 129
           NY N Y N+C   Y
Sbjct: 342 NYNNNYNNNCKKLY 355


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,794
Number of Sequences: 438
Number of extensions: 1188
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6471036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)