Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15h08
         (416 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   0.067
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   4.2  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   4.2  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   4.2  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   7.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   7.4  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   7.4  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    21   7.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   7.4  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    20   9.7  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    20   9.7  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    20   9.7  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    20   9.7  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.4 bits (48), Expect(2) = 0.067
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 322 LSKKKIVTIPVWQ*TV 369
           LS  ++VT PVWQ T+
Sbjct: 897 LSGNRLVTFPVWQVTL 912



 Score = 22.2 bits (45), Expect(2) = 0.067
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 187 QVNLINFFGNLDFM 228
           Q NLI F GNL F+
Sbjct: 874 QNNLIGFIGNLTFL 887


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 87  ILNML*NPTYSS*KELMCFLSSIKNI*CLSG 179
           +LN L +P YS+ +  +  LSS+ +  CL G
Sbjct: 169 VLNNLHDPEYSARENELRALSSLFSKGCLVG 199


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 87  ILNML*NPTYSS*KELMCFLSSIKNI*CLSG 179
           +LN L +P YS+ +  +  LSS+ +  CL G
Sbjct: 169 VLNNLHDPEYSARENELRALSSLFSKGCLVG 199


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 87  ILNML*NPTYSS*KELMCFLSSIKNI*CLSG 179
           +LN L +P YS+ +  +  LSS+ +  CL G
Sbjct: 169 VLNNLHDPEYSARENELRALSSLFSKGCLVG 199


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 414 FFLIFMQIYLYFYYAYCSLPY 352
           +F+  +++  Y+YY    LPY
Sbjct: 223 YFMEDVELNAYYYYMREMLPY 243


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 414 FFLIFMQIYLYFYYAYCSLPY 352
           +F+  +++  Y+YY    LPY
Sbjct: 223 YFMEDVELNAYYYYMREMLPY 243


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 202 LLNSPVPLPLRHQMFLMEDKKHINS 128
           L+N  V +P  HQ   ME   ++ S
Sbjct: 702 LMNRAVSVPQSHQPGAMEQVSYLTS 726


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -3

Query: 381 FYYAYCSLPYRYCHYLFFAK 322
           F+  YC+     C Y  F+K
Sbjct: 48  FWLGYCNSAINPCIYALFSK 67


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -3

Query: 381 FYYAYCSLPYRYCHYLFFAK 322
           F+  YC+     C Y  F+K
Sbjct: 496 FWLGYCNSAINPCIYALFSK 515


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 47  MHTFGVPFGVCTSTI 3
           +HTFG  FG+  S +
Sbjct: 176 VHTFGAYFGLAISFV 190


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 8/35 (22%), Positives = 16/35 (45%)
 Frame = +3

Query: 291 VLPPLTRCMMA*QKKDSDNTCMAMNSRHSKNINIS 395
           +LPP  RC M  +  + +   +  + R +  I  +
Sbjct: 463 ILPPRKRCKMILESMEIERNGLIASQRQNSVIQFA 497


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 8/29 (27%), Positives = 13/29 (44%)
 Frame = +3

Query: 300 PLTRCMMA*QKKDSDNTCMAMNSRHSKNI 386
           P+T       +   ++TC   NS H K +
Sbjct: 332 PMTSTKSTIVRNHLNSTCSVTNSPHQKKL 360


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 171 DIKCF*WKIKSTLILFKNYRLDF 103
           D++C+   I   L  FKN   DF
Sbjct: 64  DLQCYTTCIMKLLRTFKNGNFDF 86


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,841
Number of Sequences: 438
Number of extensions: 2338
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)