Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte15g20
         (678 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    25   0.88 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   0.88 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   1.2  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    23   3.5  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   3.5  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   6.2  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   8.2  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 487 TWLWSGGFRSCFLGSL*NVEIYISFHYRCCLRWYCSTSS 603
           +WL SG + S F+GS    +  I +  R CL+ Y   +S
Sbjct: 261 SWLGSGQYISDFVGSCRKTD-QILYFIRGCLQTYLINAS 298


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 487 TWLWSGGFRSCFLGSL*NVEIYISFHYRCCLRWYCSTSS 603
           +WL SG + S F+GS    +  I +  R CL+ Y   +S
Sbjct: 299 SWLGSGQYISDFVGSCRKTD-QILYFIRGCLQTYLINAS 336


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +1

Query: 1   EYNVKIDKKPSNKFIFETNPFISYKFLNYSQNEKSIV 111
           EY+ ++ +   ++ I E    I++  LNY  +E S++
Sbjct: 769 EYDYELSRGYIDEKILENQNIITHMILNYVGSEDSVI 805


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -1

Query: 540 ILK*SKKTRAEPAAPQPSPNNCRNKC 463
           +L   ++ R+EP  P    NNC   C
Sbjct: 326 LLNFQEERRSEPVEPPRRKNNCPLHC 351


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 158 KDQQPTVEFVGPVKIVLVDPSKKENRRKSCGA 253
           K++  TVE V PVK ++  P        +CG+
Sbjct: 19  KNEISTVEPVDPVKSLVCSPDLSVFTSPACGS 50


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 65  FPINF*IILKMKSRSLMPK 121
           F +NF  +++MK +  MP+
Sbjct: 213 FAVNFMNVMRMKLKQFMPR 231


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 568 CNGMKCKFRHFKVIQENKSGTRRSTT 491
           C G+ C+     V++EN SG   + T
Sbjct: 10  CLGIACQNIRGGVVRENSSGKNLTNT 35


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,269
Number of Sequences: 438
Number of extensions: 4428
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)